RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 ESCO1Q5FWF5 840 aa16.1■□□□□ 0.17
VAT1L-201ENST00000302536 SETBP1Q9Y6X0 1596 aa16.1■□□□□ 0.17
VAT1L-201ENST00000302536 WDR63Q8IWG1 891 aa16.09■□□□□ 0.17
VAT1L-201ENST00000302536 RRP9O43818 475 aaKnown RBP16.09■□□□□ 0.17
VAT1L-201ENST00000302536 FOXD4L6Q3SYB3 417 aaPredicted RBP16.09■□□□□ 0.17
VAT1L-201ENST00000302536 ZKSCAN2Q63HK3 967 aa16.09■□□□□ 0.17
VAT1L-201ENST00000302536 FOXD4L3Q6VB84 417 aaPredicted RBP16.09■□□□□ 0.17
VAT1L-201ENST00000302536 TSPYL6Q8N831 410 aa16.09■□□□□ 0.17
VAT1L-201ENST00000302536 CENPQQ7L2Z9 268 aaPredicted RBP16.08■□□□□ 0.17
VAT1L-201ENST00000302536 MPNDQ8N594 471 aa16.08■□□□□ 0.17
VAT1L-201ENST00000302536 TTC21BQ7Z4L5 1316 aa16.08■□□□□ 0.17
VAT1L-201ENST00000302536 KIAA1210Q9ULL0 1709 aa16.08■□□□□ 0.16
VAT1L-201ENST00000302536 FOXO3O43524 673 aa16.08■□□□□ 0.16
VAT1L-201ENST00000302536 MSNP26038 577 aaKnown RBP16.08■□□□□ 0.16
VAT1L-201ENST00000302536 DZIP1LQ8IYY4 767 aaKnown RBP16.08■□□□□ 0.16
VAT1L-201ENST00000302536 ZNF428Q96B54 188 aa16.08■□□□□ 0.16
VAT1L-201ENST00000302536 BCL11BQ9C0K0 894 aaPredicted RBP16.08■□□□□ 0.16
VAT1L-201ENST00000302536 IFT172Q9UG01 1749 aa16.07■□□□□ 0.16
VAT1L-201ENST00000302536 HSCBQ8IWL3 235 aa16.07■□□□□ 0.16
VAT1L-201ENST00000302536 ZFYVE9O95405 1425 aa16.07■□□□□ 0.16
VAT1L-201ENST00000302536 PCDHB15Q9Y5E8 787 aa16.07■□□□□ 0.16
VAT1L-201ENST00000302536 FCHSD2O94868 740 aa16.06■□□□□ 0.16
VAT1L-201ENST00000302536 TRMT2AQ8IZ69 625 aaKnown RBP16.06■□□□□ 0.16
VAT1L-201ENST00000302536 PLEKHF1Q96S99 279 aa16.06■□□□□ 0.16
VAT1L-201ENST00000302536 PUS7Q96PZ0 661 aaKnown RBP16.06■□□□□ 0.16
VAT1L-201ENST00000302536 NSD2O96028 1365 aa16.05■□□□□ 0.16
VAT1L-201ENST00000302536 PSME1Q06323 249 aa16.05■□□□□ 0.16
VAT1L-201ENST00000302536 EIF4A2Q14240 407 aaKnown RBP16.05■□□□□ 0.16
VAT1L-201ENST00000302536 ZNF692Q9BU19 519 aaPredicted RBP16.05■□□□□ 0.16
VAT1L-201ENST00000302536 ARHGEF28Q8N1W1 1705 aaKnown RBP16.05■□□□□ 0.16
VAT1L-201ENST00000302536 ANKLE2Q86XL3 938 aa16.04■□□□□ 0.16
VAT1L-201ENST00000302536 TRIM27P14373 513 aa16.04■□□□□ 0.16
VAT1L-201ENST00000302536 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
VAT1L-201ENST00000302536 XRCC6P12956 609 aaKnown RBP eCLIP16.03■□□□□ 0.16
VAT1L-201ENST00000302536 TMEM57Q8N5G2 664 aa16.03■□□□□ 0.16
VAT1L-201ENST00000302536 ARHGEF40Q8TER5 1519 aa16.03■□□□□ 0.16
VAT1L-201ENST00000302536 IL13P35225 146 aa16.03■□□□□ 0.16
VAT1L-201ENST00000302536 ZC3H13Q5T200 1668 aaKnown RBP16.03■□□□□ 0.16
VAT1L-201ENST00000302536 SLC4A10Q6U841 1118 aa16.02■□□□□ 0.16
VAT1L-201ENST00000302536 RTF1Q92541 710 aaKnown RBP16.02■□□□□ 0.16
VAT1L-201ENST00000302536 INSRP06213 1382 aa16.02■□□□□ 0.15
VAT1L-201ENST00000302536 GOLGA6L22H0YM25 854 aa16.02■□□□□ 0.15
VAT1L-201ENST00000302536 NINLQ9Y2I6 1382 aa16.01■□□□□ 0.15
VAT1L-201ENST00000302536 HSPA2P54652 639 aa16.01■□□□□ 0.15
VAT1L-201ENST00000302536 CD163L1Q9NR16 1453 aa16.01■□□□□ 0.15
VAT1L-201ENST00000302536 MBIPQ9NS73 344 aa16.01■□□□□ 0.15
VAT1L-201ENST00000302536 PDE3AQ14432 1141 aa16.01■□□□□ 0.15
VAT1L-201ENST00000302536 NGEFQ8N5V2 710 aa16.01■□□□□ 0.15
VAT1L-201ENST00000302536 DDX17Q92841 729 aaKnown RBP16.01■□□□□ 0.15
VAT1L-201ENST00000302536 NOL8Q76FK4 1167 aaKnown RBP16■□□□□ 0.15
VAT1L-201ENST00000302536 C8orf58Q8NAV2 365 aa16■□□□□ 0.15
VAT1L-201ENST00000302536 TWISTNBQ3B726 338 aaPredicted RBP16■□□□□ 0.15
VAT1L-201ENST00000302536 MAP3K19Q56UN5 1328 aa16■□□□□ 0.15
VAT1L-201ENST00000302536 PDZRN3Q9UPQ7 1066 aa15.99■□□□□ 0.15
VAT1L-201ENST00000302536 ATF7IPQ6VMQ6 1270 aa15.99■□□□□ 0.15
VAT1L-201ENST00000302536 AGLP35573 1532 aa15.99■□□□□ 0.15
VAT1L-201ENST00000302536 PROSER2Q86WR7 435 aaPredicted RBP15.98■□□□□ 0.15
VAT1L-201ENST00000302536 ORAI2Q96SN7 254 aa15.98■□□□□ 0.15
VAT1L-201ENST00000302536 PRDM10Q9NQV6 1147 aa15.98■□□□□ 0.15
VAT1L-201ENST00000302536 MVPQ14764 893 aaKnown RBP15.98■□□□□ 0.15
VAT1L-201ENST00000302536 NEURL4Q96JN8 1562 aa15.98■□□□□ 0.15
VAT1L-201ENST00000302536 LNPKQ9C0E8 428 aa15.98■□□□□ 0.15
VAT1L-201ENST00000302536 KIF13AQ9H1H9 1805 aa15.97■□□□□ 0.15
VAT1L-201ENST00000302536 ESPNB1AK53 854 aa15.97■□□□□ 0.15
VAT1L-201ENST00000302536 RWDD1Q9H446 243 aaPredicted RBP15.97■□□□□ 0.15
VAT1L-201ENST00000302536 TBX22Q9Y458 520 aa15.97■□□□□ 0.15
VAT1L-201ENST00000302536 ADAMTS13Q76LX8 1427 aa15.97■□□□□ 0.15
VAT1L-201ENST00000302536 CPS1P31327 1500 aa15.96■□□□□ 0.15
VAT1L-201ENST00000302536 EDC4Q6P2E9 1401 aaKnown RBP15.96■□□□□ 0.15
VAT1L-201ENST00000302536 PTPRUQ92729 1446 aa15.96■□□□□ 0.15
VAT1L-201ENST00000302536 IPO8O15397 1037 aaKnown RBP15.96■□□□□ 0.15
VAT1L-201ENST00000302536 GNAI1P63096 354 aa15.96■□□□□ 0.15
VAT1L-201ENST00000302536 TRAK2O60296 914 aa15.96■□□□□ 0.14
VAT1L-201ENST00000302536 ZC3H6P61129 1189 aaKnown RBP15.96■□□□□ 0.14
VAT1L-201ENST00000302536 C8orf34Q49A92 452 aa15.96■□□□□ 0.14
VAT1L-201ENST00000302536 R3HCC1Q9Y3T6 440 aaKnown RBP15.96■□□□□ 0.14
VAT1L-201ENST00000302536 SPATA31D1Q6ZQQ2 1576 aa15.96■□□□□ 0.14
VAT1L-201ENST00000302536 PHF8Q9UPP1 1060 aa15.95■□□□□ 0.14
VAT1L-201ENST00000302536 CCDC27Q2M243 656 aa15.95■□□□□ 0.14
VAT1L-201ENST00000302536 TSPYL4Q9UJ04 414 aa15.95■□□□□ 0.14
VAT1L-201ENST00000302536 KDM2BQ8NHM5 1336 aa15.95■□□□□ 0.14
VAT1L-201ENST00000302536 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
VAT1L-201ENST00000302536 KIAA1211Q6ZU35 1233 aa15.95■□□□□ 0.14
VAT1L-201ENST00000302536 ZHX1Q9UKY1 873 aaPredicted RBP15.95■□□□□ 0.14
VAT1L-201ENST00000302536 MYO3AQ8NEV4 1616 aa15.94■□□□□ 0.14
VAT1L-201ENST00000302536 SEC24BO95487 1268 aa15.94■□□□□ 0.14
VAT1L-201ENST00000302536 EIF2S2P20042 333 aaKnown RBP15.93■□□□□ 0.14
VAT1L-201ENST00000302536 LRRC59Q96AG4 307 aaKnown RBP15.93■□□□□ 0.14
VAT1L-201ENST00000302536 EYA1Q99502 592 aa15.93■□□□□ 0.14
VAT1L-201ENST00000302536 DDX49Q9Y6V7 483 aaKnown RBP15.93■□□□□ 0.14
VAT1L-201ENST00000302536 PLEKHG1Q9ULL1 1385 aa15.93■□□□□ 0.14
VAT1L-201ENST00000302536 CLCN1P35523 988 aa15.93■□□□□ 0.14
VAT1L-201ENST00000302536 MTHFSDQ2M296 383 aaKnown RBP15.92■□□□□ 0.14
VAT1L-201ENST00000302536 ANKRD45Q5TZF3 282 aa15.92■□□□□ 0.14
VAT1L-201ENST00000302536 PHF23Q9BUL5 403 aaPredicted RBP15.92■□□□□ 0.14
VAT1L-201ENST00000302536 F6X3S4 739 aa15.92■□□□□ 0.14
VAT1L-201ENST00000302536 VAMP4O75379 141 aa15.91■□□□□ 0.14
VAT1L-201ENST00000302536 CALD1Q05682 793 aaKnown RBP15.91■□□□□ 0.14
VAT1L-201ENST00000302536 LMOD3Q0VAK6 560 aa15.91■□□□□ 0.14
VAT1L-201ENST00000302536 DDX19BQ9UMR2 479 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms