RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 KINO60870 393 aaKnown RBP23.11■■□□□ 1.29
TSR1-201ENST00000301364 CCDC47Q96A33 483 aaKnown RBP23.11■■□□□ 1.29
TSR1-201ENST00000301364 PARD3Q8TEW0 1356 aa23.1■■□□□ 1.29
TSR1-201ENST00000301364 CCDC70Q6NSX1 233 aa23.1■■□□□ 1.29
TSR1-201ENST00000301364 ZNF771Q7L3S4 317 aaPredicted RBP23.1■■□□□ 1.29
TSR1-201ENST00000301364 PDIA4P13667 645 aaKnown RBP23.1■■□□□ 1.29
TSR1-201ENST00000301364 FOSBP53539 338 aa23.1■■□□□ 1.29
TSR1-201ENST00000301364 NUDT16Q96DE0 195 aaKnown RBP23.1■■□□□ 1.29
TSR1-201ENST00000301364 AMOTL1Q8IY63 956 aa23.09■■□□□ 1.29
TSR1-201ENST00000301364 TRIM27P14373 513 aa23.09■■□□□ 1.29
TSR1-201ENST00000301364 CCDC192P0DO97 292 aa23.09■■□□□ 1.29
TSR1-201ENST00000301364 AMER1Q5JTC6 1135 aaPredicted RBP23.09■■□□□ 1.29
TSR1-201ENST00000301364 NUP160Q12769 1436 aa23.08■■□□□ 1.29
TSR1-201ENST00000301364 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.08■■□□□ 1.28
TSR1-201ENST00000301364 ARGLU1Q9NWB6 273 aaPredicted RBP23.08■■□□□ 1.28
TSR1-201ENST00000301364 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.28
TSR1-201ENST00000301364 ZSCAN31Q96LW9 406 aaPredicted RBP23.08■■□□□ 1.28
TSR1-201ENST00000301364 DHX16O60231 1041 aaKnown RBP23.07■■□□□ 1.28
TSR1-201ENST00000301364 ATF3P18847 181 aa23.07■■□□□ 1.28
TSR1-201ENST00000301364 KRT85P78386 507 aa23.07■■□□□ 1.28
TSR1-201ENST00000301364 ZNF396Q96N95 335 aaPredicted RBP23.07■■□□□ 1.28
TSR1-201ENST00000301364 THUMPD2Q9BTF0 503 aaKnown RBP23.07■■□□□ 1.28
TSR1-201ENST00000301364 DHX29Q7Z478 1369 aaKnown RBP23.07■■□□□ 1.28
TSR1-201ENST00000301364 SRGAP3O43295 1099 aa23.07■■□□□ 1.28
TSR1-201ENST00000301364 TEX35Q5T0J7 233 aa23.06■■□□□ 1.28
TSR1-201ENST00000301364 THEMISQ8N1K5 641 aaPredicted RBP23.06■■□□□ 1.28
TSR1-201ENST00000301364 OLFM4Q6UX06 510 aa23.06■■□□□ 1.28
TSR1-201ENST00000301364 DNAJC2Q99543 621 aaKnown RBP23.06■■□□□ 1.28
TSR1-201ENST00000301364 G3V3G9 751 aa23.06■■□□□ 1.28
TSR1-201ENST00000301364 DCAF8Q5TAQ9 597 aa23.06■■□□□ 1.28
TSR1-201ENST00000301364 FBXW7Q969H0 707 aa23.06■■□□□ 1.28
TSR1-201ENST00000301364 C14orf93Q9H972 538 aaKnown RBP23.06■■□□□ 1.28
TSR1-201ENST00000301364 ADGRL1O94910 1474 aa23.06■■□□□ 1.28
TSR1-201ENST00000301364 IL16Q14005 1332 aa23.06■■□□□ 1.28
TSR1-201ENST00000301364 MNS1Q8NEH6 495 aa23.05■■□□□ 1.28
TSR1-201ENST00000301364 NOL10Q9BSC4 688 aaKnown RBP23.05■■□□□ 1.28
TSR1-201ENST00000301364 ZNF530Q6P9A1 599 aaPredicted RBP23.05■■□□□ 1.28
TSR1-201ENST00000301364 IGHDP01880 384 aa23.05■■□□□ 1.28
TSR1-201ENST00000301364 VPS37DQ86XT2 251 aa23.04■■□□□ 1.28
TSR1-201ENST00000301364 CFAP43Q8NDM7 1665 aa23.04■■□□□ 1.28
TSR1-201ENST00000301364 ESCO1Q5FWF5 840 aa23.04■■□□□ 1.28
TSR1-201ENST00000301364 TBC1D32Q96NH3 1257 aa23.04■■□□□ 1.28
TSR1-201ENST00000301364 PRAG1Q86YV5 1406 aa23.03■■□□□ 1.28
TSR1-201ENST00000301364 BMP2KLQ5H9B9 411 aa23.03■■□□□ 1.28
TSR1-201ENST00000301364 LARP1BQ659C4 914 aaKnown RBP23.03■■□□□ 1.28
TSR1-201ENST00000301364 RAPGEF6Q8TEU7 1601 aa23.02■■□□□ 1.28
TSR1-201ENST00000301364 BLOC1S2Q6QNY1 142 aa23.01■■□□□ 1.27
TSR1-201ENST00000301364 EXOC6BQ9Y2D4 811 aa23.01■■□□□ 1.27
TSR1-201ENST00000301364 XBP1P17861 261 aa23.01■■□□□ 1.27
TSR1-201ENST00000301364 IL1RAPL2Q9NP60 686 aa23.01■■□□□ 1.27
TSR1-201ENST00000301364 TBC1D2BQ9UPU7 963 aa23.01■■□□□ 1.27
TSR1-201ENST00000301364 NOS1P29475 1434 aa23.01■■□□□ 1.27
TSR1-201ENST00000301364 ASXL1Q8IXJ9 1541 aa23■■□□□ 1.27
TSR1-201ENST00000301364 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
TSR1-201ENST00000301364 MX1P20591 662 aa23■■□□□ 1.27
TSR1-201ENST00000301364 ZSCAN30Q86W11 494 aa23■■□□□ 1.27
TSR1-201ENST00000301364 GNAT3A8MTJ3 354 aa23■■□□□ 1.27
TSR1-201ENST00000301364 DHX8Q14562 1220 aaKnown RBP23■■□□□ 1.27
TSR1-201ENST00000301364 TATP17735 454 aaPredicted RBP23■■□□□ 1.27
TSR1-201ENST00000301364 TNMDQ9H2S6 317 aa23■■□□□ 1.27
TSR1-201ENST00000301364 ANO8Q9HCE9 1232 aaPredicted RBP23■■□□□ 1.27
TSR1-201ENST00000301364 PDRG1Q9NUG6 133 aa23■■□□□ 1.27
TSR1-201ENST00000301364 NUP153P49790 1475 aaKnown RBP23■■□□□ 1.27
TSR1-201ENST00000301364 RAB11FIP3O75154 756 aa22.99■■□□□ 1.27
TSR1-201ENST00000301364 SART3Q15020 963 aaKnown RBP22.99■■□□□ 1.27
TSR1-201ENST00000301364 KIF1BPQ96EK5 621 aa22.99■■□□□ 1.27
TSR1-201ENST00000301364 PCMTD1Q96MG8 357 aaPredicted RBP22.99■■□□□ 1.27
TSR1-201ENST00000301364 ITSN2Q9NZM3 1697 aa22.99■■□□□ 1.27
TSR1-201ENST00000301364 HDAC1Q13547 482 aaPredicted RBP22.99■■□□□ 1.27
TSR1-201ENST00000301364 PPP6R1Q9UPN7 881 aa22.99■■□□□ 1.27
TSR1-201ENST00000301364 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
TSR1-201ENST00000301364 SYTL4Q96C24 671 aaPredicted RBP22.98■■□□□ 1.27
TSR1-201ENST00000301364 STK38Q15208 465 aa22.98■■□□□ 1.27
TSR1-201ENST00000301364 MAP4K4O95819 1239 aaPredicted RBP22.98■■□□□ 1.27
TSR1-201ENST00000301364 WAPLQ7Z5K2 1190 aa22.98■■□□□ 1.27
TSR1-201ENST00000301364 AACSQ86V21 672 aa22.98■■□□□ 1.27
TSR1-201ENST00000301364 BRMS1Q9HCU9 246 aa22.98■■□□□ 1.27
TSR1-201ENST00000301364 KRT32Q14532 448 aa22.98■■□□□ 1.27
TSR1-201ENST00000301364 MCM10Q7L590 875 aa22.98■■□□□ 1.27
TSR1-201ENST00000301364 CEP89Q96ST8 783 aa22.98■■□□□ 1.27
TSR1-201ENST00000301364 JAKMIP1Q96N16 626 aaKnown RBP22.97■■□□□ 1.27
TSR1-201ENST00000301364 CWC27Q6UX04 472 aaKnown RBP22.97■■□□□ 1.27
TSR1-201ENST00000301364 CCP110O43303 1012 aa22.97■■□□□ 1.27
TSR1-201ENST00000301364 ANKRD36BQ8N2N9 1353 aa22.97■■□□□ 1.27
TSR1-201ENST00000301364 CCDC158Q5M9N0 1113 aa22.96■■□□□ 1.27
TSR1-201ENST00000301364 JMYQ8N9B5 988 aa22.96■■□□□ 1.27
TSR1-201ENST00000301364 TNPO1Q92973 898 aaKnown RBP22.96■■□□□ 1.27
TSR1-201ENST00000301364 VPS53Q5VIR6 699 aa22.96■■□□□ 1.27
TSR1-201ENST00000301364 CTTNBP2Q8WZ74 1663 aa22.96■■□□□ 1.27
TSR1-201ENST00000301364 IDI1Q13907 227 aa22.96■■□□□ 1.27
TSR1-201ENST00000301364 DCTN1Q14203 1278 aa22.96■■□□□ 1.27
TSR1-201ENST00000301364 PTPRCP08575 1304 aa22.96■■□□□ 1.27
TSR1-201ENST00000301364 GLRX3O76003 335 aaKnown RBP22.95■■□□□ 1.27
TSR1-201ENST00000301364 SLC26A8Q96RN1 970 aa22.95■■□□□ 1.26
TSR1-201ENST00000301364 EMILIN1Q9Y6C2 1016 aa22.95■■□□□ 1.26
TSR1-201ENST00000301364 NME9Q86XW9 330 aa22.95■■□□□ 1.26
TSR1-201ENST00000301364 SIL1Q9H173 461 aa22.95■■□□□ 1.26
TSR1-201ENST00000301364 PLEKHH1Q9ULM0 1364 aa22.94■■□□□ 1.26
TSR1-201ENST00000301364 SPC24Q8NBT2 197 aa22.94■■□□□ 1.26
TSR1-201ENST00000301364 ARHGAP45Q92619 1136 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms