RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 WASLO00401 505 aaPredicted RBP16.77■□□□□ 0.27
CTDP1-202ENST00000299543 NCBP3Q53F19 620 aaKnown RBP16.77■□□□□ 0.27
CTDP1-202ENST00000299543 NEO1Q92859 1461 aa16.77■□□□□ 0.27
CTDP1-202ENST00000299543 MRPL50Q8N5N7 158 aaKnown RBP16.76■□□□□ 0.27
CTDP1-202ENST00000299543 CHMP5Q9NZZ3 219 aa16.76■□□□□ 0.27
CTDP1-202ENST00000299543 ZBTB7BO15156 539 aaPredicted RBP16.76■□□□□ 0.27
CTDP1-202ENST00000299543 MCM4P33991 863 aa16.76■□□□□ 0.27
CTDP1-202ENST00000299543 DIP2CQ9Y2E4 1556 aa16.76■□□□□ 0.27
CTDP1-202ENST00000299543 CALD1Q05682 793 aaKnown RBP16.75■□□□□ 0.27
CTDP1-202ENST00000299543 PRDM4Q9UKN5 801 aa16.75■□□□□ 0.27
CTDP1-202ENST00000299543 CD163L1Q9NR16 1453 aa16.75■□□□□ 0.27
CTDP1-202ENST00000299543 AEBP1Q8IUX7 1158 aa16.75■□□□□ 0.27
CTDP1-202ENST00000299543 SULT6B1Q6IMI4 303 aa16.75■□□□□ 0.27
CTDP1-202ENST00000299543 TRIM44Q96DX7 344 aaPredicted RBP16.75■□□□□ 0.27
CTDP1-202ENST00000299543 CFAP74Q9C0B2 1584 aa16.74■□□□□ 0.27
CTDP1-202ENST00000299543 IL13P35225 146 aa16.74■□□□□ 0.27
CTDP1-202ENST00000299543 ARHGAP31Q2M1Z3 1444 aa16.74■□□□□ 0.27
CTDP1-202ENST00000299543 MCM10Q7L590 875 aa16.73■□□□□ 0.27
CTDP1-202ENST00000299543 RBM42Q9BTD8 480 aaKnown RBP16.73■□□□□ 0.27
CTDP1-202ENST00000299543 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
CTDP1-202ENST00000299543 CCDC61Q9Y6R9 512 aa16.73■□□□□ 0.27
CTDP1-202ENST00000299543 COL3A1P02461 1466 aaPredicted RBP16.72■□□□□ 0.27
CTDP1-202ENST00000299543 ZFYVE9O95405 1425 aa16.72■□□□□ 0.27
CTDP1-202ENST00000299543 MYO5BQ9ULV0 1848 aa16.72■□□□□ 0.27
CTDP1-202ENST00000299543 PRDM10Q9NQV6 1147 aa16.72■□□□□ 0.27
CTDP1-202ENST00000299543 IFT57Q9NWB7 429 aa16.72■□□□□ 0.27
CTDP1-202ENST00000299543 PNPLA6Q8IY17 1366 aa16.72■□□□□ 0.27
CTDP1-202ENST00000299543 PPIP5K1Q6PFW1 1433 aa16.71■□□□□ 0.27
CTDP1-202ENST00000299543 TRAK2O60296 914 aa16.71■□□□□ 0.27
CTDP1-202ENST00000299543 USP32Q8NFA0 1604 aa16.71■□□□□ 0.27
CTDP1-202ENST00000299543 SIRT2Q8IXJ6 389 aa16.71■□□□□ 0.26
CTDP1-202ENST00000299543 ZHX1Q9UKY1 873 aaPredicted RBP16.7■□□□□ 0.26
CTDP1-202ENST00000299543 RIMS2Q9UQ26 1411 aa16.7■□□□□ 0.26
CTDP1-202ENST00000299543 C16orf71Q8IYS4 520 aaPredicted RBP16.7■□□□□ 0.26
CTDP1-202ENST00000299543 CFAP44Q96MT7 982 aa16.7■□□□□ 0.26
CTDP1-202ENST00000299543 CHMP4BQ9H444 224 aaKnown RBP16.7■□□□□ 0.26
CTDP1-202ENST00000299543 ADGRB2O60241 1585 aa16.69■□□□□ 0.26
CTDP1-202ENST00000299543 ZBTB7CA1YPR0 619 aa16.69■□□□□ 0.26
CTDP1-202ENST00000299543 ESPNB1AK53 854 aa16.69■□□□□ 0.26
CTDP1-202ENST00000299543 SLC4A10Q6U841 1118 aa16.69■□□□□ 0.26
CTDP1-202ENST00000299543 TBC1D9Q6ZT07 1266 aa16.69■□□□□ 0.26
CTDP1-202ENST00000299543 GCC1Q96CN9 775 aa16.69■□□□□ 0.26
CTDP1-202ENST00000299543 ALKQ9UM73 1620 aa16.69■□□□□ 0.26
CTDP1-202ENST00000299543 LMOD3Q0VAK6 560 aa16.69■□□□□ 0.26
CTDP1-202ENST00000299543 API5Q9BZZ5 524 aaKnown RBP16.69■□□□□ 0.26
CTDP1-202ENST00000299543 METP08581 1390 aa16.68■□□□□ 0.26
CTDP1-202ENST00000299543 ARHGEF40Q8TER5 1519 aa16.68■□□□□ 0.26
CTDP1-202ENST00000299543 LRRC7Q96NW7 1537 aa16.68■□□□□ 0.26
CTDP1-202ENST00000299543 FGD1P98174 961 aa16.68■□□□□ 0.26
CTDP1-202ENST00000299543 BMP2KLQ5H9B9 411 aa16.68■□□□□ 0.26
CTDP1-202ENST00000299543 HSP90AB2PQ58FF8 381 aa16.67■□□□□ 0.26
CTDP1-202ENST00000299543 ZNF428Q96B54 188 aa16.67■□□□□ 0.26
CTDP1-202ENST00000299543 SMARCA5O60264 1052 aaPredicted RBP16.67■□□□□ 0.26
CTDP1-202ENST00000299543 FAM135BQ49AJ0 1406 aa16.67■□□□□ 0.26
CTDP1-202ENST00000299543 CD2BP2O95400 341 aaKnown RBP16.66■□□□□ 0.26
CTDP1-202ENST00000299543 SLC26A8Q96RN1 970 aa16.66■□□□□ 0.26
CTDP1-202ENST00000299543 FAM13BQ9NYF5 915 aa16.66■□□□□ 0.26
CTDP1-202ENST00000299543 KIAA1211Q6ZU35 1233 aa16.66■□□□□ 0.26
CTDP1-202ENST00000299543 NECTIN2Q92692 538 aa16.66■□□□□ 0.26
CTDP1-202ENST00000299543 TMEM131LA2VDJ0 1609 aa16.66■□□□□ 0.26
CTDP1-202ENST00000299543 ZMYM3Q14202 1370 aa16.65■□□□□ 0.26
CTDP1-202ENST00000299543 FSD2A1L4K1 749 aa16.65■□□□□ 0.26
CTDP1-202ENST00000299543 EIF4A2Q14240 407 aaKnown RBP16.65■□□□□ 0.26
CTDP1-202ENST00000299543 OTUD7AQ8TE49 926 aaPredicted RBP16.64■□□□□ 0.26
CTDP1-202ENST00000299543 ARHGAP45Q92619 1136 aa16.64■□□□□ 0.26
CTDP1-202ENST00000299543 ZNF853P0CG23 659 aa16.64■□□□□ 0.25
CTDP1-202ENST00000299543 RBM25P49756 843 aaKnown RBP16.63■□□□□ 0.25
CTDP1-202ENST00000299543 TNPO1Q92973 898 aaKnown RBP16.63■□□□□ 0.25
CTDP1-202ENST00000299543 VIRMAQ69YN4 1812 aaKnown RBP16.63■□□□□ 0.25
CTDP1-202ENST00000299543 FOXO3O43524 673 aa16.63■□□□□ 0.25
CTDP1-202ENST00000299543 SLC4A2P04920 1241 aa16.63■□□□□ 0.25
CTDP1-202ENST00000299543 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.63■□□□□ 0.25
CTDP1-202ENST00000299543 NUTM2GQ5VZR2 741 aa16.63■□□□□ 0.25
CTDP1-202ENST00000299543 F6X3S4 739 aa16.62■□□□□ 0.25
CTDP1-202ENST00000299543 HDGFP51858 240 aaKnown RBP16.62■□□□□ 0.25
CTDP1-202ENST00000299543 PDCL3Q9H2J4 239 aa16.62■□□□□ 0.25
CTDP1-202ENST00000299543 PREX1Q8TCU6 1659 aa16.62■□□□□ 0.25
CTDP1-202ENST00000299543 CDC45O75419 566 aa16.62■□□□□ 0.25
CTDP1-202ENST00000299543 AEBP2Q6ZN18 517 aaPredicted RBP16.62■□□□□ 0.25
CTDP1-202ENST00000299543 PRR36Q9H6K5 1346 aa16.62■□□□□ 0.25
CTDP1-202ENST00000299543 MED14O60244 1454 aa16.62■□□□□ 0.25
CTDP1-202ENST00000299543 ACEP12821 1306 aa16.61■□□□□ 0.25
CTDP1-202ENST00000299543 EDC4Q6P2E9 1401 aaKnown RBP16.61■□□□□ 0.25
CTDP1-202ENST00000299543 ABCC4O15439 1325 aa16.61■□□□□ 0.25
CTDP1-202ENST00000299543 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
CTDP1-202ENST00000299543 MEIS3Q99687 375 aa16.61■□□□□ 0.25
CTDP1-202ENST00000299543 TSPOAP1O95153 1857 aa16.61■□□□□ 0.25
CTDP1-202ENST00000299543 A2ML1A8K2U0 1454 aa16.61■□□□□ 0.25
CTDP1-202ENST00000299543 GSPT1P15170 499 aaKnown RBP16.6■□□□□ 0.25
CTDP1-202ENST00000299543 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
CTDP1-202ENST00000299543 PLEKHM2Q8IWE5 1019 aa16.6■□□□□ 0.25
CTDP1-202ENST00000299543 LTV1Q96GA3 475 aaPredicted RBP16.6■□□□□ 0.25
CTDP1-202ENST00000299543 GRPEL1Q9HAV7 217 aa16.6■□□□□ 0.25
CTDP1-202ENST00000299543 DDX11L8A8MPP1 907 aa16.6■□□□□ 0.25
CTDP1-202ENST00000299543 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
CTDP1-202ENST00000299543 CEBPAP49715 358 aaPredicted RBP16.6■□□□□ 0.25
CTDP1-202ENST00000299543 C14orf37Q86TY3 774 aa16.6■□□□□ 0.25
CTDP1-202ENST00000299543 MAP2P11137 1827 aaKnown RBP16.59■□□□□ 0.25
CTDP1-202ENST00000299543 BRPF1P55201 1214 aaPredicted RBP16.59■□□□□ 0.25
CTDP1-202ENST00000299543 GAS2L3Q86XJ1 694 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms