RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 SMC5Q8IY18 1101 aa12.69□□□□□ -0.38
TNFRSF11B-201ENST00000297350 METP08581 1390 aa12.69□□□□□ -0.38
TNFRSF11B-201ENST00000297350 NFKBIBQ15653 356 aa12.68□□□□□ -0.38
TNFRSF11B-201ENST00000297350 TBC1D32Q96NH3 1257 aa12.68□□□□□ -0.38
TNFRSF11B-201ENST00000297350 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
TNFRSF11B-201ENST00000297350 XRN1Q8IZH2 1706 aaKnown RBP12.68□□□□□ -0.38
TNFRSF11B-201ENST00000297350 PRKAR2BP31323 418 aa12.68□□□□□ -0.38
TNFRSF11B-201ENST00000297350 HAP1P54257 671 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF11B-201ENST00000297350 KIF24Q5T7B8 1368 aa12.68□□□□□ -0.38
TNFRSF11B-201ENST00000297350 ITPRIPQ8IWB1 547 aa12.67□□□□□ -0.38
TNFRSF11B-201ENST00000297350 ZBTB40Q9NUA8 1239 aa12.67□□□□□ -0.38
TNFRSF11B-201ENST00000297350 EIF5BO60841 1220 aaKnown RBP12.67□□□□□ -0.38
TNFRSF11B-201ENST00000297350 COG3Q96JB2 828 aa12.67□□□□□ -0.38
TNFRSF11B-201ENST00000297350 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
TNFRSF11B-201ENST00000297350 NOB1Q9ULX3 412 aaKnown RBP12.67□□□□□ -0.38
TNFRSF11B-201ENST00000297350 NALCNQ8IZF0 1738 aa12.67□□□□□ -0.38
TNFRSF11B-201ENST00000297350 IL13P35225 146 aa12.66□□□□□ -0.38
TNFRSF11B-201ENST00000297350 TNNQ9UQP3 1299 aa12.66□□□□□ -0.38
TNFRSF11B-201ENST00000297350 WAPLQ7Z5K2 1190 aa12.66□□□□□ -0.38
TNFRSF11B-201ENST00000297350 NUDT16Q96DE0 195 aaKnown RBP12.66□□□□□ -0.38
TNFRSF11B-201ENST00000297350 DLG5Q8TDM6 1919 aa12.65□□□□□ -0.38
TNFRSF11B-201ENST00000297350 ZNF853P0CG23 659 aa12.64□□□□□ -0.39
TNFRSF11B-201ENST00000297350 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.64□□□□□ -0.39
TNFRSF11B-201ENST00000297350 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.64□□□□□ -0.39
TNFRSF11B-201ENST00000297350 GSE1Q14687 1217 aa12.63□□□□□ -0.39
TNFRSF11B-201ENST00000297350 TMEM57Q8N5G2 664 aa12.63□□□□□ -0.39
TNFRSF11B-201ENST00000297350 GCC1Q96CN9 775 aa12.63□□□□□ -0.39
TNFRSF11B-201ENST00000297350 NUCB1Q02818 461 aa12.62□□□□□ -0.39
TNFRSF11B-201ENST00000297350 CFAP44Q96MT7 982 aa12.62□□□□□ -0.39
TNFRSF11B-201ENST00000297350 MRPL50Q8N5N7 158 aaKnown RBP12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 API5Q9BZZ5 524 aaKnown RBP12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 ABCC4O15439 1325 aa12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 OVOS2A0A0J9YW53 1432 aa12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 OVOS2Q6IE36 1432 aa12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 RGPD1P0DJD0 1748 aa12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 PLEKHG3A1L390 1219 aa12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 VAMP4O75379 141 aa12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 SEC24BO95487 1268 aa12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 SLC4A3P48751 1232 aa12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 CEBPAP49715 358 aaPredicted RBP12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 NME9Q86XW9 330 aa12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 EID1Q9Y6B2 187 aa12.61□□□□□ -0.39
TNFRSF11B-201ENST00000297350 LTKP29376 864 aa12.6□□□□□ -0.39
TNFRSF11B-201ENST00000297350 PTPRUQ92729 1446 aa12.6□□□□□ -0.39
TNFRSF11B-201ENST00000297350 ROBO2Q9HCK4 1378 aa12.6□□□□□ -0.39
TNFRSF11B-201ENST00000297350 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
TNFRSF11B-201ENST00000297350 THEMISQ8N1K5 641 aaPredicted RBP12.6□□□□□ -0.39
TNFRSF11B-201ENST00000297350 EMILIN1Q9Y6C2 1016 aa12.6□□□□□ -0.39
TNFRSF11B-201ENST00000297350 USP31Q70CQ4 1352 aa12.59□□□□□ -0.39
TNFRSF11B-201ENST00000297350 TXNDC2Q86VQ3 553 aa12.59□□□□□ -0.39
TNFRSF11B-201ENST00000297350 KIAA0232Q92628 1395 aa12.59□□□□□ -0.39
TNFRSF11B-201ENST00000297350 PHACTR3Q96KR7 559 aa12.59□□□□□ -0.39
TNFRSF11B-201ENST00000297350 TBX22Q9Y458 520 aa12.59□□□□□ -0.39
TNFRSF11B-201ENST00000297350 USP6P35125 1406 aa12.58□□□□□ -0.39
TNFRSF11B-201ENST00000297350 FMN2Q9NZ56 1722 aa12.58□□□□□ -0.4
TNFRSF11B-201ENST00000297350 TTC21AQ8NDW8 1320 aa12.58□□□□□ -0.4
TNFRSF11B-201ENST00000297350 SETD1BQ9UPS6 1966 aaKnown RBP12.58□□□□□ -0.4
TNFRSF11B-201ENST00000297350 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
TNFRSF11B-201ENST00000297350 CHD1LQ86WJ1 897 aa12.58□□□□□ -0.4
TNFRSF11B-201ENST00000297350 C22orf23Q9BZE7 217 aa12.58□□□□□ -0.4
TNFRSF11B-201ENST00000297350 MBIPQ9NS73 344 aa12.58□□□□□ -0.4
TNFRSF11B-201ENST00000297350 CHD2O14647 1828 aaKnown RBP12.57□□□□□ -0.4
TNFRSF11B-201ENST00000297350 ZBTB7BO15156 539 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF11B-201ENST00000297350 ARHGEF10O15013 1369 aa12.57□□□□□ -0.4
TNFRSF11B-201ENST00000297350 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
TNFRSF11B-201ENST00000297350 HMOX1P09601 288 aa12.57□□□□□ -0.4
TNFRSF11B-201ENST00000297350 TWISTNBQ3B726 338 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF11B-201ENST00000297350 ANTXR1Q9H6X2 564 aa12.57□□□□□ -0.4
TNFRSF11B-201ENST00000297350 PRR36Q9H6K5 1346 aa12.56□□□□□ -0.4
TNFRSF11B-201ENST00000297350 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
TNFRSF11B-201ENST00000297350 RBM25P49756 843 aaKnown RBP12.56□□□□□ -0.4
TNFRSF11B-201ENST00000297350 TBC1D2Q9BYX2 928 aa12.56□□□□□ -0.4
TNFRSF11B-201ENST00000297350 SENP3Q9H4L4 574 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF11B-201ENST00000297350 FRAT2O75474 233 aaPredicted RBP12.54□□□□□ -0.4
TNFRSF11B-201ENST00000297350 PTPRCP08575 1304 aa12.54□□□□□ -0.4
TNFRSF11B-201ENST00000297350 PEAK1Q9H792 1746 aa12.54□□□□□ -0.4
TNFRSF11B-201ENST00000297350 NWD1Q149M9 1564 aa12.53□□□□□ -0.4
TNFRSF11B-201ENST00000297350 SNX21Q969T3 373 aa12.53□□□□□ -0.4
TNFRSF11B-201ENST00000297350 ANKARQ7Z5J8 1434 aa12.53□□□□□ -0.4
TNFRSF11B-201ENST00000297350 INTS3Q68E01 1043 aaKnown RBP12.53□□□□□ -0.4
TNFRSF11B-201ENST00000297350 NCOA3Q9Y6Q9 1424 aa12.53□□□□□ -0.4
TNFRSF11B-201ENST00000297350 EIF4A2Q14240 407 aaKnown RBP12.52□□□□□ -0.4
TNFRSF11B-201ENST00000297350 ACEP12821 1306 aa12.52□□□□□ -0.4
TNFRSF11B-201ENST00000297350 CHL1O00533 1208 aa12.52□□□□□ -0.41
TNFRSF11B-201ENST00000297350 HSCBQ8IWL3 235 aa12.52□□□□□ -0.41
TNFRSF11B-201ENST00000297350 CHMP5Q9NZZ3 219 aa12.52□□□□□ -0.41
TNFRSF11B-201ENST00000297350 SOS1Q07889 1333 aaPredicted RBP12.52□□□□□ -0.41
TNFRSF11B-201ENST00000297350 SBNO1A3KN83 1393 aa12.52□□□□□ -0.41
TNFRSF11B-201ENST00000297350 FLT4P35916 1363 aa12.52□□□□□ -0.41
TNFRSF11B-201ENST00000297350 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
TNFRSF11B-201ENST00000297350 RRS1Q15050 365 aaKnown RBP12.51□□□□□ -0.41
TNFRSF11B-201ENST00000297350 TSPYL6Q8N831 410 aa12.51□□□□□ -0.41
TNFRSF11B-201ENST00000297350 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
TNFRSF11B-201ENST00000297350 KDRP35968 1356 aa12.51□□□□□ -0.41
TNFRSF11B-201ENST00000297350 LRRC37A3O60309 1634 aa12.5□□□□□ -0.41
TNFRSF11B-201ENST00000297350 THUMPD2Q9BTF0 503 aaKnown RBP12.5□□□□□ -0.41
TNFRSF11B-201ENST00000297350 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF11B-201ENST00000297350 RPAP2Q8IXW5 612 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF11B-201ENST00000297350 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
TNFRSF11B-201ENST00000297350 LNPKQ9C0E8 428 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms