RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 PDCL2Q8N4E4 241 aa12.6□□□□□ -0.39
ARHGEF3-201ENST00000296315 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
ARHGEF3-201ENST00000296315 SYCP2Q9BX26 1530 aa12.59□□□□□ -0.39
ARHGEF3-201ENST00000296315 NPHP1O15259 732 aa12.59□□□□□ -0.39
ARHGEF3-201ENST00000296315 FAM83GA6ND36 823 aa12.59□□□□□ -0.39
ARHGEF3-201ENST00000296315 KRT24Q2M2I5 525 aa12.59□□□□□ -0.39
ARHGEF3-201ENST00000296315 SYAP1Q96A49 352 aaPredicted RBP12.59□□□□□ -0.39
ARHGEF3-201ENST00000296315 USP26Q9BXU7 913 aa12.59□□□□□ -0.39
ARHGEF3-201ENST00000296315 ADCY10Q96PN6 1610 aa12.59□□□□□ -0.39
ARHGEF3-201ENST00000296315 ZBTB22O15209 634 aa12.58□□□□□ -0.39
ARHGEF3-201ENST00000296315 TRERF1Q96PN7 1200 aa12.58□□□□□ -0.39
ARHGEF3-201ENST00000296315 TMX3Q96JJ7 454 aa12.58□□□□□ -0.4
ARHGEF3-201ENST00000296315 MAP4K4O95819 1239 aaPredicted RBP12.58□□□□□ -0.4
ARHGEF3-201ENST00000296315 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
ARHGEF3-201ENST00000296315 CDK11BP21127 795 aaKnown RBP12.57□□□□□ -0.4
ARHGEF3-201ENST00000296315 TWISTNBQ3B726 338 aaPredicted RBP12.57□□□□□ -0.4
ARHGEF3-201ENST00000296315 NECTIN2Q92692 538 aa12.57□□□□□ -0.4
ARHGEF3-201ENST00000296315 PDLIM2Q96JY6 352 aa12.57□□□□□ -0.4
ARHGEF3-201ENST00000296315 NUP160Q12769 1436 aa12.57□□□□□ -0.4
ARHGEF3-201ENST00000296315 NCOA3Q9Y6Q9 1424 aa12.57□□□□□ -0.4
ARHGEF3-201ENST00000296315 PPIP5K1Q6PFW1 1433 aa12.57□□□□□ -0.4
ARHGEF3-201ENST00000296315 REC8O95072 547 aa12.57□□□□□ -0.4
ARHGEF3-201ENST00000296315 MBD3O95983 291 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 TTC22Q5TAA0 569 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 NPC1L1Q9UHC9 1359 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 SHANK2Q9UPX8 1470 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 MLECQ14165 292 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 HS1BP3Q53T59 392 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 GIMAP6Q6P9H5 292 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 MYRIPQ8NFW9 859 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 PHACTR3Q96KR7 559 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 KANK1Q14678 1352 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 CHMP4BQ9H444 224 aaKnown RBP12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 CWC22Q9HCG8 908 aaKnown RBP12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 EXOC6BQ9Y2D4 811 aa12.56□□□□□ -0.4
ARHGEF3-201ENST00000296315 ZSCAN20P17040 1043 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 DMTNQ08495 405 aa12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 USP48Q86UV5 1035 aa12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 PHF23Q9BUL5 403 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 ERCC6L2Q5T890 1561 aa12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 SCAPERQ9BY12 1400 aa12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 CT47B1P0C2W7 299 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 TERF1P54274 439 aa12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 ZNF710Q8N1W2 664 aa12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 SYNMO15061 1565 aa12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 ERICH4A6NGS2 130 aa12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 PLCD3Q8N3E9 789 aa12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 C8orf58Q8NAV2 365 aa12.55□□□□□ -0.4
ARHGEF3-201ENST00000296315 ERVK-7P63135 1459 aa12.54□□□□□ -0.4
ARHGEF3-201ENST00000296315 EVC2Q86UK5 1308 aa12.54□□□□□ -0.4
ARHGEF3-201ENST00000296315 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.54□□□□□ -0.4
ARHGEF3-201ENST00000296315 V9GYY5 206 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF3-201ENST00000296315 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.54□□□□□ -0.4
ARHGEF3-201ENST00000296315 IFT57Q9NWB7 429 aa12.54□□□□□ -0.4
ARHGEF3-201ENST00000296315 CNPY2Q9Y2B0 182 aa12.54□□□□□ -0.4
ARHGEF3-201ENST00000296315 C16orf45Q96MC5 204 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF3-201ENST00000296315 VIRMAQ69YN4 1812 aaKnown RBP12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 ABCC10Q5T3U5 1492 aa12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 RIOK3O14730 519 aaKnown RBP12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 ERC2O15083 957 aa12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 ZMYM3Q14202 1370 aa12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 CLASP1Q7Z460 1538 aa12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 EIF2AK4Q9P2K8 1649 aaKnown RBP12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 VAMP4O75379 141 aa12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 RAPGEF3O95398 923 aa12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 NAA30Q147X3 362 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 CAMK4Q16566 473 aa12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 MRPL50Q8N5N7 158 aaKnown RBP12.53□□□□□ -0.4
ARHGEF3-201ENST00000296315 MCCP23508 829 aa12.52□□□□□ -0.4
ARHGEF3-201ENST00000296315 HMGN5P82970 282 aaKnown RBP12.52□□□□□ -0.4
ARHGEF3-201ENST00000296315 PALD1Q9ULE6 856 aa12.52□□□□□ -0.4
ARHGEF3-201ENST00000296315 PHF14O94880 888 aa12.52□□□□□ -0.4
ARHGEF3-201ENST00000296315 MBIPQ9NS73 344 aa12.52□□□□□ -0.4
ARHGEF3-201ENST00000296315 F6X3S4 739 aa12.52□□□□□ -0.41
ARHGEF3-201ENST00000296315 MCM5P33992 734 aa12.52□□□□□ -0.41
ARHGEF3-201ENST00000296315 VPS37CA5D8V6 355 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 FBXW7Q969H0 707 aa12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 MEIS3Q99687 375 aa12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 PYCARDQ9ULZ3 195 aa12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 TRAPPC8Q9Y2L5 1435 aa12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 CDC42BPAQ5VT25 1732 aa12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 FGD1P98174 961 aa12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 PTPRTO14522 1441 aa12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 API5Q9BZZ5 524 aaKnown RBP12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 STAG3Q9UJ98 1225 aa12.51□□□□□ -0.41
ARHGEF3-201ENST00000296315 ZBTB9Q96C00 473 aa12.5□□□□□ -0.41
ARHGEF3-201ENST00000296315 CROCC2H7BZ55 1655 aa12.5□□□□□ -0.41
ARHGEF3-201ENST00000296315 ABCC11Q96J66 1382 aa12.5□□□□□ -0.41
ARHGEF3-201ENST00000296315 CYB5RLQ6IPT4 315 aa12.5□□□□□ -0.41
ARHGEF3-201ENST00000296315 PIBF1Q8WXW3 757 aa12.5□□□□□ -0.41
ARHGEF3-201ENST00000296315 PLEKHF1Q96S99 279 aa12.5□□□□□ -0.41
ARHGEF3-201ENST00000296315 CYP2E1P05181 493 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF3-201ENST00000296315 CPA1P15085 419 aa12.5□□□□□ -0.41
ARHGEF3-201ENST00000296315 NOS1P29475 1434 aa12.5□□□□□ -0.41
ARHGEF3-201ENST00000296315 ALDH1L2Q3SY69 923 aa12.5□□□□□ -0.41
ARHGEF3-201ENST00000296315 CD109Q6YHK3 1445 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms