RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 UHRF1BP1LA0JNW5 1464 aa21.38■■□□□ 1.01
CDC42EP3-201ENST00000295324 A2MP01023 1474 aa21.38■■□□□ 1.01
CDC42EP3-201ENST00000295324 ZNF652Q9Y2D9 606 aa21.38■■□□□ 1.01
CDC42EP3-201ENST00000295324 TOM1O60784 492 aa21.38■■□□□ 1.01
CDC42EP3-201ENST00000295324 FOXD4L6Q3SYB3 417 aaPredicted RBP21.38■■□□□ 1.01
CDC42EP3-201ENST00000295324 FOXD4L3Q6VB84 417 aaPredicted RBP21.38■■□□□ 1.01
CDC42EP3-201ENST00000295324 TPM2P07951 284 aa21.37■■□□□ 1.01
CDC42EP3-201ENST00000295324 ATF7IPQ6VMQ6 1270 aa21.37■■□□□ 1.01
CDC42EP3-201ENST00000295324 DDX49Q9Y6V7 483 aaKnown RBP21.37■■□□□ 1.01
CDC42EP3-201ENST00000295324 IKQ13123 557 aaPredicted RBP21.36■■□□□ 1.01
CDC42EP3-201ENST00000295324 XBP1P17861 261 aa21.36■■□□□ 1.01
CDC42EP3-201ENST00000295324 EXOC5O00471 708 aa21.36■■□□□ 1.01
CDC42EP3-201ENST00000295324 PTCD1O75127 700 aaKnown RBP21.36■■□□□ 1.01
CDC42EP3-201ENST00000295324 BECN2A8MW95 431 aa21.35■■□□□ 1.01
CDC42EP3-201ENST00000295324 TSR1Q2NL82 804 aaKnown RBP21.35■■□□□ 1.01
CDC42EP3-201ENST00000295324 SKOR2Q2VWA4 1001 aaPredicted RBP21.35■■□□□ 1.01
CDC42EP3-201ENST00000295324 BRMS1Q9HCU9 246 aa21.35■■□□□ 1.01
CDC42EP3-201ENST00000295324 HOOK1Q9UJC3 728 aaKnown RBP21.35■■□□□ 1.01
CDC42EP3-201ENST00000295324 SCAF11Q99590 1463 aaKnown RBP21.35■■□□□ 1.01
CDC42EP3-201ENST00000295324 CEP126Q9P2H0 1117 aa21.34■■□□□ 1.01
CDC42EP3-201ENST00000295324 GOLGA6L19H0YKK7 550 aa21.34■■□□□ 1.01
CDC42EP3-201ENST00000295324 TSHZ2Q9NRE2 1034 aa21.34■■□□□ 1.01
CDC42EP3-201ENST00000295324 VPS37CA5D8V6 355 aaPredicted RBP21.34■■□□□ 1.01
CDC42EP3-201ENST00000295324 TPM3P06753 285 aa21.34■■□□□ 1.01
CDC42EP3-201ENST00000295324 NOC3LQ8WTT2 800 aaKnown RBP21.34■■□□□ 1.01
CDC42EP3-201ENST00000295324 C1orf115Q9H7X2 142 aa21.34■■□□□ 1.01
CDC42EP3-201ENST00000295324 TAF7Q15545 349 aaPredicted RBP21.33■■□□□ 1.01
CDC42EP3-201ENST00000295324 BICDL1Q6ZP65 573 aa21.33■■□□□ 1
CDC42EP3-201ENST00000295324 C22orf23Q9BZE7 217 aa21.33■■□□□ 1
CDC42EP3-201ENST00000295324 SIL1Q9H173 461 aa21.33■■□□□ 1
CDC42EP3-201ENST00000295324 LRRCC1Q9C099 1032 aa21.32■■□□□ 1
CDC42EP3-201ENST00000295324 ZPR1O75312 459 aa21.32■■□□□ 1
CDC42EP3-201ENST00000295324 NACAP1Q9BZK3 213 aa21.32■■□□□ 1
CDC42EP3-201ENST00000295324 EMILIN1Q9Y6C2 1016 aa21.32■■□□□ 1
CDC42EP3-201ENST00000295324 NUP153P49790 1475 aaKnown RBP21.31■■□□□ 1
CDC42EP3-201ENST00000295324 BCAR3O75815 825 aa21.31■■□□□ 1
CDC42EP3-201ENST00000295324 IGHMBP2P38935 993 aaKnown RBP21.31■■□□□ 1
CDC42EP3-201ENST00000295324 TTC21BQ7Z4L5 1316 aa21.31■■□□□ 1
CDC42EP3-201ENST00000295324 UBAP1LF5GYI3 381 aa21.31■■□□□ 1
CDC42EP3-201ENST00000295324 ZSCAN25Q6NSZ9 544 aa21.31■■□□□ 1
CDC42EP3-201ENST00000295324 CCAR1Q8IX12 1150 aaKnown RBP21.31■■□□□ 1
CDC42EP3-201ENST00000295324 USHBP1Q8N6Y0 703 aa21.31■■□□□ 1
CDC42EP3-201ENST00000295324 MTMR7Q9Y216 660 aa21.31■■□□□ 1
CDC42EP3-201ENST00000295324 DUOX2Q9NRD8 1548 aa21.3■■□□□ 1
CDC42EP3-201ENST00000295324 TPM1P09493 284 aa21.3■■□□□ 1
CDC42EP3-201ENST00000295324 SRGAP3O43295 1099 aa21.3■■□□□ 1
CDC42EP3-201ENST00000295324 DUSP27Q5VZP5 1158 aa21.3■■□□□ 1
CDC42EP3-201ENST00000295324 MCM10Q7L590 875 aa21.3■■□□□ 1
CDC42EP3-201ENST00000295324 BICD2Q8TD16 824 aa21.3■■□□□ 1
CDC42EP3-201ENST00000295324 MPRIPQ6WCQ1 1025 aa21.3■■□□□ 1
CDC42EP3-201ENST00000295324 ACEP12821 1306 aa21.29■■□□□ 1
CDC42EP3-201ENST00000295324 ABCC10Q5T3U5 1492 aa21.29■■□□□ 1
CDC42EP3-201ENST00000295324 NSD2O96028 1365 aa21.29■■□□□ 1
CDC42EP3-201ENST00000295324 NPHP3Q7Z494 1330 aa21.29■■□□□ 1
CDC42EP3-201ENST00000295324 NUCB2P80303 420 aa21.29■■□□□ 1
CDC42EP3-201ENST00000295324 ANKRD20A12PQ8NF67 263 aa21.29■■□□□ 1
CDC42EP3-201ENST00000295324 LARP1Q6PKG0 1096 aaKnown RBP21.28■■□□□ 1
CDC42EP3-201ENST00000295324 ABCC11Q96J66 1382 aa21.28■■□□□ 1
CDC42EP3-201ENST00000295324 WDR97A6NE52 1622 aa21.28■■□□□ 1
CDC42EP3-201ENST00000295324 IFT57Q9NWB7 429 aa21.28■■□□□ 1
CDC42EP3-201ENST00000295324 UGGT2Q9NYU1 1516 aa21.27■■□□□ 1
CDC42EP3-201ENST00000295324 SLC4A3P48751 1232 aa21.27■■□□□ 1
CDC42EP3-201ENST00000295324 PDZRN3Q9UPQ7 1066 aa21.27■■□□□ 1
CDC42EP3-201ENST00000295324 MVPQ14764 893 aaKnown RBP21.27■■□□□ 1
CDC42EP3-201ENST00000295324 CHMP5Q9NZZ3 219 aa21.27■■□□□ 1
CDC42EP3-201ENST00000295324 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
CDC42EP3-201ENST00000295324 RPRD2Q5VT52 1461 aaKnown RBP21.26■□□□□ 0.99
CDC42EP3-201ENST00000295324 HSP90AB3PQ58FF7 597 aa21.26■□□□□ 0.99
CDC42EP3-201ENST00000295324 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP3-201ENST00000295324 RRP12Q5JTH9 1297 aaKnown RBP21.26■□□□□ 0.99
CDC42EP3-201ENST00000295324 RBM5P52756 815 aaKnown RBP eCLIP21.25■□□□□ 0.99
CDC42EP3-201ENST00000295324 RPAP2Q8IXW5 612 aaPredicted RBP21.25■□□□□ 0.99
CDC42EP3-201ENST00000295324 IFNL2Q8IZJ0 200 aa21.25■□□□□ 0.99
CDC42EP3-201ENST00000295324 MIS18AQ9NYP9 233 aa21.25■□□□□ 0.99
CDC42EP3-201ENST00000295324 THUMPD2Q9BTF0 503 aaKnown RBP21.24■□□□□ 0.99
CDC42EP3-201ENST00000295324 SYCP2Q9BX26 1530 aa21.24■□□□□ 0.99
CDC42EP3-201ENST00000295324 FMNL2Q96PY5 1086 aa21.24■□□□□ 0.99
CDC42EP3-201ENST00000295324 PDE4CQ08493 712 aa21.24■□□□□ 0.99
CDC42EP3-201ENST00000295324 TEX13AQ9BXU3 409 aaPredicted RBP21.24■□□□□ 0.99
CDC42EP3-201ENST00000295324 RIMS2Q9UQ26 1411 aa21.23■□□□□ 0.99
CDC42EP3-201ENST00000295324 CCDC73Q6ZRK6 1079 aa21.23■□□□□ 0.99
CDC42EP3-201ENST00000295324 TTC21AQ8NDW8 1320 aa21.23■□□□□ 0.99
CDC42EP3-201ENST00000295324 AACSQ86V21 672 aa21.23■□□□□ 0.99
CDC42EP3-201ENST00000295324 TRAPPC8Q9Y2L5 1435 aa21.22■□□□□ 0.99
CDC42EP3-201ENST00000295324 FOSBP53539 338 aa21.22■□□□□ 0.99
CDC42EP3-201ENST00000295324 DCTN1Q14203 1278 aa21.22■□□□□ 0.99
CDC42EP3-201ENST00000295324 FKBP4Q02790 459 aaKnown RBP eCLIP21.22■□□□□ 0.99
CDC42EP3-201ENST00000295324 PRM3Q9NNZ6 103 aa21.21■□□□□ 0.99
CDC42EP3-201ENST00000295324 MCM2P49736 904 aa21.21■□□□□ 0.99
CDC42EP3-201ENST00000295324 ABCC2Q92887 1545 aa21.21■□□□□ 0.99
CDC42EP3-201ENST00000295324 SLFN5Q08AF3 891 aa21.21■□□□□ 0.99
CDC42EP3-201ENST00000295324 ANKRD24Q8TF21 1146 aa21.21■□□□□ 0.99
CDC42EP3-201ENST00000295324 ITSN2Q9NZM3 1697 aa21.21■□□□□ 0.99
CDC42EP3-201ENST00000295324 KIAA0556O60303 1618 aa21.21■□□□□ 0.99
CDC42EP3-201ENST00000295324 ARID3AQ99856 593 aa21.2■□□□□ 0.98
CDC42EP3-201ENST00000295324 ATP2B2Q01814 1243 aa21.2■□□□□ 0.98
CDC42EP3-201ENST00000295324 PCMTD1Q96MG8 357 aaPredicted RBP21.19■□□□□ 0.98
CDC42EP3-201ENST00000295324 CCDC85AQ96PX6 553 aaPredicted RBP21.19■□□□□ 0.98
CDC42EP3-201ENST00000295324 CHRNA2Q15822 529 aa21.19■□□□□ 0.98
CDC42EP3-201ENST00000295324 RAI14Q9P0K7 980 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms