RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 TTC21BQ7Z4L5 1316 aa19.38■□□□□ 0.69
LRRTM1-201ENST00000295057 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
LRRTM1-201ENST00000295057 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
LRRTM1-201ENST00000295057 PLEKHG3A1L390 1219 aa19.38■□□□□ 0.69
LRRTM1-201ENST00000295057 NAP1L5Q96NT1 182 aaPredicted RBP19.37■□□□□ 0.69
LRRTM1-201ENST00000295057 ADGRB2O60241 1585 aa19.36■□□□□ 0.69
LRRTM1-201ENST00000295057 PTCH1Q13635 1447 aa19.36■□□□□ 0.69
LRRTM1-201ENST00000295057 TMPOP42166 694 aaKnown RBP19.36■□□□□ 0.69
LRRTM1-201ENST00000295057 HSP90AA2PQ14568 343 aaPredicted RBP19.36■□□□□ 0.69
LRRTM1-201ENST00000295057 GOLGA6L3A6NEY3 463 aa19.35■□□□□ 0.69
LRRTM1-201ENST00000295057 RRP9O43818 475 aaKnown RBP19.35■□□□□ 0.69
LRRTM1-201ENST00000295057 CANXP27824 592 aaKnown RBP19.35■□□□□ 0.69
LRRTM1-201ENST00000295057 MON2Q7Z3U7 1717 aa19.34■□□□□ 0.69
LRRTM1-201ENST00000295057 NGEFQ8N5V2 710 aa19.34■□□□□ 0.69
LRRTM1-201ENST00000295057 NGDNQ8NEJ9 315 aaKnown RBP19.34■□□□□ 0.69
LRRTM1-201ENST00000295057 TBC1D32Q96NH3 1257 aa19.34■□□□□ 0.69
LRRTM1-201ENST00000295057 TRIM35Q9UPQ4 493 aa19.34■□□□□ 0.69
LRRTM1-201ENST00000295057 MAP2P11137 1827 aaKnown RBP19.34■□□□□ 0.69
LRRTM1-201ENST00000295057 FSD2A1L4K1 749 aa19.34■□□□□ 0.69
LRRTM1-201ENST00000295057 PRKAR2BP31323 418 aa19.34■□□□□ 0.69
LRRTM1-201ENST00000295057 PHACTR3Q96KR7 559 aa19.34■□□□□ 0.69
LRRTM1-201ENST00000295057 PDE3AQ14432 1141 aa19.33■□□□□ 0.69
LRRTM1-201ENST00000295057 TSR2Q969E8 191 aaKnown RBP19.33■□□□□ 0.69
LRRTM1-201ENST00000295057 SETD1BQ9UPS6 1966 aaKnown RBP19.33■□□□□ 0.68
LRRTM1-201ENST00000295057 IL13P35225 146 aa19.33■□□□□ 0.68
LRRTM1-201ENST00000295057 PNNQ9H307 717 aaKnown RBP19.33■□□□□ 0.68
LRRTM1-201ENST00000295057 USP6P35125 1406 aa19.32■□□□□ 0.68
LRRTM1-201ENST00000295057 DIP2AQ14689 1571 aa19.32■□□□□ 0.68
LRRTM1-201ENST00000295057 AKAP12Q02952 1782 aa19.32■□□□□ 0.68
LRRTM1-201ENST00000295057 RIPK4P57078 832 aa19.32■□□□□ 0.68
LRRTM1-201ENST00000295057 ITSN1Q15811 1721 aa19.32■□□□□ 0.68
LRRTM1-201ENST00000295057 NUTM2GQ5VZR2 741 aa19.32■□□□□ 0.68
LRRTM1-201ENST00000295057 WDR63Q8IWG1 891 aa19.32■□□□□ 0.68
LRRTM1-201ENST00000295057 HSP90AA1P07900 732 aaKnown RBP19.31■□□□□ 0.68
LRRTM1-201ENST00000295057 MCM4P33991 863 aa19.31■□□□□ 0.68
LRRTM1-201ENST00000295057 CCDC27Q2M243 656 aa19.31■□□□□ 0.68
LRRTM1-201ENST00000295057 BCL2L13Q9BXK5 485 aa19.31■□□□□ 0.68
LRRTM1-201ENST00000295057 TNNQ9UQP3 1299 aa19.31■□□□□ 0.68
LRRTM1-201ENST00000295057 XRN1Q8IZH2 1706 aaKnown RBP19.31■□□□□ 0.68
LRRTM1-201ENST00000295057 PCDHB15Q9Y5E8 787 aa19.31■□□□□ 0.68
LRRTM1-201ENST00000295057 RGPD8O14715 1765 aaPredicted RBP19.31■□□□□ 0.68
LRRTM1-201ENST00000295057 TOPAZ1Q8N9V7 1692 aa19.3■□□□□ 0.68
LRRTM1-201ENST00000295057 UPF2Q9HAU5 1272 aaKnown RBP19.3■□□□□ 0.68
LRRTM1-201ENST00000295057 CLCN1P35523 988 aa19.3■□□□□ 0.68
LRRTM1-201ENST00000295057 AATKQ6ZMQ8 1374 aa19.28■□□□□ 0.68
LRRTM1-201ENST00000295057 FCHSD2O94868 740 aa19.28■□□□□ 0.68
LRRTM1-201ENST00000295057 PDZRN3Q9UPQ7 1066 aa19.28■□□□□ 0.68
LRRTM1-201ENST00000295057 KDM4FA0A1W2PPD8 638 aa19.28■□□□□ 0.68
LRRTM1-201ENST00000295057 THUMPD2Q9BTF0 503 aaKnown RBP19.28■□□□□ 0.68
LRRTM1-201ENST00000295057 LRRC7Q96NW7 1537 aa19.27■□□□□ 0.68
LRRTM1-201ENST00000295057 HSP90AB2PQ58FF8 381 aa19.27■□□□□ 0.68
LRRTM1-201ENST00000295057 RLBP1P12271 317 aa19.27■□□□□ 0.67
LRRTM1-201ENST00000295057 SSH2Q76I76 1423 aa19.26■□□□□ 0.67
LRRTM1-201ENST00000295057 AEBP1Q8IUX7 1158 aa19.26■□□□□ 0.67
LRRTM1-201ENST00000295057 NRKQ7Z2Y5 1582 aa19.26■□□□□ 0.67
LRRTM1-201ENST00000295057 OVOS2A0A0J9YW53 1432 aa19.25■□□□□ 0.67
LRRTM1-201ENST00000295057 OVOS2Q6IE36 1432 aa19.25■□□□□ 0.67
LRRTM1-201ENST00000295057 PIK3R4Q99570 1358 aa19.25■□□□□ 0.67
LRRTM1-201ENST00000295057 TRAK2O60296 914 aa19.25■□□□□ 0.67
LRRTM1-201ENST00000295057 RARSP54136 660 aaKnown RBP19.25■□□□□ 0.67
LRRTM1-201ENST00000295057 CDK12Q9NYV4 1490 aaPredicted RBP19.24■□□□□ 0.67
LRRTM1-201ENST00000295057 EIF4A2Q14240 407 aaKnown RBP19.24■□□□□ 0.67
LRRTM1-201ENST00000295057 C14orf37Q86TY3 774 aa19.24■□□□□ 0.67
LRRTM1-201ENST00000295057 NPHP4O75161 1426 aaPredicted RBP19.23■□□□□ 0.67
LRRTM1-201ENST00000295057 EXOSC9Q06265 439 aaKnown RBP19.23■□□□□ 0.67
LRRTM1-201ENST00000295057 MYH16Q9H6N6 1097 aa19.23■□□□□ 0.67
LRRTM1-201ENST00000295057 PLEKHG5O94827 1062 aa19.22■□□□□ 0.67
LRRTM1-201ENST00000295057 NLRP6P59044 892 aa19.22■□□□□ 0.67
LRRTM1-201ENST00000295057 ERBB4Q15303 1308 aa19.21■□□□□ 0.67
LRRTM1-201ENST00000295057 MAP3K19Q56UN5 1328 aa19.21■□□□□ 0.67
LRRTM1-201ENST00000295057 SULT6B1Q6IMI4 303 aa19.21■□□□□ 0.67
LRRTM1-201ENST00000295057 CHD2O14647 1828 aaKnown RBP19.2■□□□□ 0.66
LRRTM1-201ENST00000295057 FAM83GA6ND36 823 aa19.2■□□□□ 0.66
LRRTM1-201ENST00000295057 NFE2L2Q16236 605 aa19.2■□□□□ 0.66
LRRTM1-201ENST00000295057 ESCO1Q5FWF5 840 aa19.2■□□□□ 0.66
LRRTM1-201ENST00000295057 PODXL2Q9NZ53 605 aa19.2■□□□□ 0.66
LRRTM1-201ENST00000295057 MFAP1P55081 439 aaKnown RBP19.19■□□□□ 0.66
LRRTM1-201ENST00000295057 CHMP5Q9NZZ3 219 aa19.19■□□□□ 0.66
LRRTM1-201ENST00000295057 MRE11P49959 708 aa19.19■□□□□ 0.66
LRRTM1-201ENST00000295057 DCTN1Q14203 1278 aa19.19■□□□□ 0.66
LRRTM1-201ENST00000295057 PHF8Q9UPP1 1060 aa19.19■□□□□ 0.66
LRRTM1-201ENST00000295057 NALCNQ8IZF0 1738 aa19.18■□□□□ 0.66
LRRTM1-201ENST00000295057 USP31Q70CQ4 1352 aa19.18■□□□□ 0.66
LRRTM1-201ENST00000295057 TTC21AQ8NDW8 1320 aa19.18■□□□□ 0.66
LRRTM1-201ENST00000295057 XPCQ01831 940 aaPredicted RBP19.18■□□□□ 0.66
LRRTM1-201ENST00000295057 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
LRRTM1-201ENST00000295057 ABTB2Q8N961 1025 aa19.18■□□□□ 0.66
LRRTM1-201ENST00000295057 C22orf23Q9BZE7 217 aa19.18■□□□□ 0.66
LRRTM1-201ENST00000295057 GRPEL1Q9HAV7 217 aa19.18■□□□□ 0.66
LRRTM1-201ENST00000295057 PEAK1Q9H792 1746 aa19.17■□□□□ 0.66
LRRTM1-201ENST00000295057 HSPA2P54652 639 aa19.17■□□□□ 0.66
LRRTM1-201ENST00000295057 ORAI2Q96SN7 254 aa19.17■□□□□ 0.66
LRRTM1-201ENST00000295057 ANKARQ7Z5J8 1434 aa19.17■□□□□ 0.66
LRRTM1-201ENST00000295057 FMN2Q9NZ56 1722 aa19.16■□□□□ 0.66
LRRTM1-201ENST00000295057 ESPNB1AK53 854 aa19.15■□□□□ 0.66
LRRTM1-201ENST00000295057 PIK3C2AO00443 1686 aa19.14■□□□□ 0.66
LRRTM1-201ENST00000295057 AMPHP49418 695 aa19.14■□□□□ 0.65
LRRTM1-201ENST00000295057 RWDD1Q9H446 243 aaPredicted RBP19.14■□□□□ 0.65
LRRTM1-201ENST00000295057 PROSER2Q86WR7 435 aaPredicted RBP19.14■□□□□ 0.65
LRRTM1-201ENST00000295057 SSH1Q8WYL5 1049 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms