RNA–Protein interactions for RNA: ENST00000295055.12

CAPN13-201, Transcript of calpain 13, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN13, Length 2,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-201ENST00000295055 HDGFL2Q7Z4V5 671 aaPredicted RBP15.4■□□□□ 0.06
CAPN13-201ENST00000295055 CPSF1Q10570 1443 aaKnown RBP15.4■□□□□ 0.06
CAPN13-201ENST00000295055 NPC1L1Q9UHC9 1359 aa15.4■□□□□ 0.06
CAPN13-201ENST00000295055 NGEFQ8N5V2 710 aa15.4■□□□□ 0.06
CAPN13-201ENST00000295055 NSD3Q9BZ95 1437 aa15.4■□□□□ 0.06
CAPN13-201ENST00000295055 TOPAZ1Q8N9V7 1692 aa15.39■□□□□ 0.05
CAPN13-201ENST00000295055 CC2D1BQ5T0F9 858 aaKnown RBP15.39■□□□□ 0.05
CAPN13-201ENST00000295055 LRRC7Q96NW7 1537 aa15.39■□□□□ 0.05
CAPN13-201ENST00000295055 ZSCAN20P17040 1043 aaPredicted RBP15.39■□□□□ 0.05
CAPN13-201ENST00000295055 KTN1Q86UP2 1357 aaKnown RBP15.39■□□□□ 0.05
CAPN13-201ENST00000295055 RALBP1Q15311 655 aa15.38■□□□□ 0.05
CAPN13-201ENST00000295055 DNTTIP2Q5QJE6 756 aaKnown RBP15.38■□□□□ 0.05
CAPN13-201ENST00000295055 MAP7D2Q96T17 732 aa15.38■□□□□ 0.05
CAPN13-201ENST00000295055 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
CAPN13-201ENST00000295055 CCER2I3L3R5 266 aa15.37■□□□□ 0.05
CAPN13-201ENST00000295055 PARD3Q8TEW0 1356 aa15.37■□□□□ 0.05
CAPN13-201ENST00000295055 SOX12O15370 315 aa15.37■□□□□ 0.05
CAPN13-201ENST00000295055 RGPD8O14715 1765 aaPredicted RBP15.37■□□□□ 0.05
CAPN13-201ENST00000295055 ACEP12821 1306 aa15.36■□□□□ 0.05
CAPN13-201ENST00000295055 RIPK4P57078 832 aa15.36■□□□□ 0.05
CAPN13-201ENST00000295055 DCCP43146 1447 aa15.36■□□□□ 0.05
CAPN13-201ENST00000295055 CGNL1Q0VF96 1302 aa15.36■□□□□ 0.05
CAPN13-201ENST00000295055 ZNF592Q92610 1267 aa15.36■□□□□ 0.05
CAPN13-201ENST00000295055 ITSN1Q15811 1721 aa15.36■□□□□ 0.05
CAPN13-201ENST00000295055 XIRP1Q702N8 1843 aaKnown RBP15.35■□□□□ 0.05
CAPN13-201ENST00000295055 PMFBP1Q8TBY8 1022 aa15.35■□□□□ 0.05
CAPN13-201ENST00000295055 ATF3P18847 181 aa15.35■□□□□ 0.05
CAPN13-201ENST00000295055 POLR3AO14802 1390 aaPredicted RBP15.35■□□□□ 0.05
CAPN13-201ENST00000295055 MSH6P52701 1360 aa15.35■□□□□ 0.05
CAPN13-201ENST00000295055 FRAT2O75474 233 aaPredicted RBP15.34■□□□□ 0.05
CAPN13-201ENST00000295055 KIF20AO95235 890 aa15.34■□□□□ 0.05
CAPN13-201ENST00000295055 CADPS2Q86UW7 1296 aa15.33■□□□□ 0.05
CAPN13-201ENST00000295055 AKAP12Q02952 1782 aa15.33■□□□□ 0.04
CAPN13-201ENST00000295055 EDC4Q6P2E9 1401 aaKnown RBP15.33■□□□□ 0.04
CAPN13-201ENST00000295055 FYB1O15117 783 aa15.32■□□□□ 0.04
CAPN13-201ENST00000295055 APPP05067 770 aa15.32■□□□□ 0.04
CAPN13-201ENST00000295055 ESCO1Q5FWF5 840 aa15.32■□□□□ 0.04
CAPN13-201ENST00000295055 L1TD1Q5T7N2 865 aaKnown RBP15.32■□□□□ 0.04
CAPN13-201ENST00000295055 NGDNQ8NEJ9 315 aaKnown RBP15.32■□□□□ 0.04
CAPN13-201ENST00000295055 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
CAPN13-201ENST00000295055 PTMAP06454 111 aaKnown RBP15.32■□□□□ 0.04
CAPN13-201ENST00000295055 MYBBP1AQ9BQG0 1328 aaKnown RBP15.32■□□□□ 0.04
CAPN13-201ENST00000295055 NSD2O96028 1365 aa15.32■□□□□ 0.04
CAPN13-201ENST00000295055 C1orf167Q5SNV9 1468 aa15.32■□□□□ 0.04
CAPN13-201ENST00000295055 MST1RQ04912 1400 aa15.31■□□□□ 0.04
CAPN13-201ENST00000295055 MON2Q7Z3U7 1717 aa15.31■□□□□ 0.04
CAPN13-201ENST00000295055 CHMP4CQ96CF2 233 aa15.31■□□□□ 0.04
CAPN13-201ENST00000295055 USP6P35125 1406 aa15.31■□□□□ 0.04
CAPN13-201ENST00000295055 KCNA4P22459 653 aa15.31■□□□□ 0.04
CAPN13-201ENST00000295055 ZNF622Q969S3 477 aaKnown RBP eCLIP15.31■□□□□ 0.04
CAPN13-201ENST00000295055 ORAI2Q96SN7 254 aa15.31■□□□□ 0.04
CAPN13-201ENST00000295055 TNNT2P45379 298 aaPredicted RBP15.3■□□□□ 0.04
CAPN13-201ENST00000295055 AEBP1Q8IUX7 1158 aa15.3■□□□□ 0.04
CAPN13-201ENST00000295055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.3■□□□□ 0.04
CAPN13-201ENST00000295055 LTBP4Q8N2S1 1624 aa15.3■□□□□ 0.04
CAPN13-201ENST00000295055 KIAA1211Q6ZU35 1233 aa15.3■□□□□ 0.04
CAPN13-201ENST00000295055 SSH2Q76I76 1423 aa15.3■□□□□ 0.04
CAPN13-201ENST00000295055 CCDC184Q52MB2 194 aa15.3■□□□□ 0.04
CAPN13-201ENST00000295055 ARID3AQ99856 593 aa15.29■□□□□ 0.04
CAPN13-201ENST00000295055 TTC21BQ7Z4L5 1316 aa15.29■□□□□ 0.04
CAPN13-201ENST00000295055 MORC1Q86VD1 984 aa15.29■□□□□ 0.04
CAPN13-201ENST00000295055 GGNBP2Q9H3C7 697 aa15.29■□□□□ 0.04
CAPN13-201ENST00000295055 FAM13BQ9NYF5 915 aa15.29■□□□□ 0.04
CAPN13-201ENST00000295055 ERBB4Q15303 1308 aa15.28■□□□□ 0.04
CAPN13-201ENST00000295055 NRKQ7Z2Y5 1582 aa15.27■□□□□ 0.04
CAPN13-201ENST00000295055 PPP2R1AP30153 589 aa15.27■□□□□ 0.04
CAPN13-201ENST00000295055 NLRP13Q86W25 1043 aa15.27■□□□□ 0.04
CAPN13-201ENST00000295055 NME9Q86XW9 330 aa15.27■□□□□ 0.03
CAPN13-201ENST00000295055 PLCD4Q9BRC7 762 aa15.26■□□□□ 0.03
CAPN13-201ENST00000295055 MRS2Q9HD23 443 aa15.26■□□□□ 0.03
CAPN13-201ENST00000295055 BRD4O60885 1362 aaPredicted RBP15.26■□□□□ 0.03
CAPN13-201ENST00000295055 TTC21AQ8NDW8 1320 aa15.25■□□□□ 0.03
CAPN13-201ENST00000295055 SLAIN2Q9P270 581 aa15.25■□□□□ 0.03
CAPN13-201ENST00000295055 KIF20BQ96Q89 1820 aa15.25■□□□□ 0.03
CAPN13-201ENST00000295055 ESPNB1AK53 854 aa15.25■□□□□ 0.03
CAPN13-201ENST00000295055 FOXO3O43524 673 aa15.25■□□□□ 0.03
CAPN13-201ENST00000295055 XRCC6P12956 609 aaKnown RBP eCLIP15.25■□□□□ 0.03
CAPN13-201ENST00000295055 PSME1Q06323 249 aa15.25■□□□□ 0.03
CAPN13-201ENST00000295055 LETM1O95202 739 aaPredicted RBP15.24■□□□□ 0.03
CAPN13-201ENST00000295055 GTPBP4Q9BZE4 634 aaKnown RBP15.24■□□□□ 0.03
CAPN13-201ENST00000295055 ZRANB1Q9UGI0 708 aa15.24■□□□□ 0.03
CAPN13-201ENST00000295055 KIF1AQ12756 1690 aa15.23■□□□□ 0.03
CAPN13-201ENST00000295055 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
CAPN13-201ENST00000295055 ANKRD26Q9UPS8 1709 aa15.23■□□□□ 0.03
CAPN13-201ENST00000295055 AXDND1Q5T1B0 1012 aaPredicted RBP15.22■□□□□ 0.03
CAPN13-201ENST00000295055 IRX5P78411 483 aaPredicted RBP15.22■□□□□ 0.03
CAPN13-201ENST00000295055 TAF3Q5VWG9 929 aa15.22■□□□□ 0.03
CAPN13-201ENST00000295055 ZBTB9Q96C00 473 aa15.22■□□□□ 0.03
CAPN13-201ENST00000295055 COG3Q96JB2 828 aa15.22■□□□□ 0.03
CAPN13-201ENST00000295055 PANK2Q9BZ23 570 aa15.22■□□□□ 0.03
CAPN13-201ENST00000295055 SLC4A3P48751 1232 aa15.21■□□□□ 0.03
CAPN13-201ENST00000295055 HNRNPUQ00839 825 aaKnown RBP eCLIP15.21■□□□□ 0.03
CAPN13-201ENST00000295055 TMEM132AQ24JP5 1023 aa15.21■□□□□ 0.03
CAPN13-201ENST00000295055 BRINP3Q76B58 766 aa15.21■□□□□ 0.03
CAPN13-201ENST00000295055 MCCP23508 829 aa15.21■□□□□ 0.03
CAPN13-201ENST00000295055 KRT28Q7Z3Y7 464 aa15.2■□□□□ 0.02
CAPN13-201ENST00000295055 USP31Q70CQ4 1352 aa15.2■□□□□ 0.02
CAPN13-201ENST00000295055 OVOS2A0A0J9YW53 1432 aa15.2■□□□□ 0.02
CAPN13-201ENST00000295055 OVOS2Q6IE36 1432 aa15.2■□□□□ 0.02
CAPN13-201ENST00000295055 CLSTN1O94985 981 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms