RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 NCKAP5LQ9HCH0 1330 aa21.15■□□□□ 0.98
CHRNE-201ENST00000293780 GZF1Q9H116 711 aaPredicted RBP21.15■□□□□ 0.98
CHRNE-201ENST00000293780 ZNF428Q96B54 188 aa21.14■□□□□ 0.98
CHRNE-201ENST00000293780 ATP7BP35670 1465 aa21.13■□□□□ 0.97
CHRNE-201ENST00000293780 RBM25P49756 843 aaKnown RBP21.13■□□□□ 0.97
CHRNE-201ENST00000293780 SIRT2Q8IXJ6 389 aa21.13■□□□□ 0.97
CHRNE-201ENST00000293780 ZNF692Q9BU19 519 aaPredicted RBP21.13■□□□□ 0.97
CHRNE-201ENST00000293780 REREQ9P2R6 1566 aa21.13■□□□□ 0.97
CHRNE-201ENST00000293780 FAM83GA6ND36 823 aa21.13■□□□□ 0.97
CHRNE-201ENST00000293780 ZNF853P0CG23 659 aa21.13■□□□□ 0.97
CHRNE-201ENST00000293780 GNAI1P63096 354 aa21.13■□□□□ 0.97
CHRNE-201ENST00000293780 RRS1Q15050 365 aaKnown RBP21.13■□□□□ 0.97
CHRNE-201ENST00000293780 IFT57Q9NWB7 429 aa21.13■□□□□ 0.97
CHRNE-201ENST00000293780 C8orf58Q8NAV2 365 aa21.12■□□□□ 0.97
CHRNE-201ENST00000293780 ARHGAP45Q92619 1136 aa21.12■□□□□ 0.97
CHRNE-201ENST00000293780 A2ML1A8K2U0 1454 aa21.11■□□□□ 0.97
CHRNE-201ENST00000293780 WASLO00401 505 aaPredicted RBP21.11■□□□□ 0.97
CHRNE-201ENST00000293780 BMP2KLQ5H9B9 411 aa21.11■□□□□ 0.97
CHRNE-201ENST00000293780 DCTN1Q14203 1278 aa21.11■□□□□ 0.97
CHRNE-201ENST00000293780 TWISTNBQ3B726 338 aaPredicted RBP21.11■□□□□ 0.97
CHRNE-201ENST00000293780 RIMS2Q9UQ26 1411 aa21.11■□□□□ 0.97
CHRNE-201ENST00000293780 AGLP35573 1532 aa21.1■□□□□ 0.97
CHRNE-201ENST00000293780 PTCH1Q13635 1447 aa21.1■□□□□ 0.97
CHRNE-201ENST00000293780 CALD1Q05682 793 aaKnown RBP21.1■□□□□ 0.97
CHRNE-201ENST00000293780 TXNDC2Q86VQ3 553 aa21.1■□□□□ 0.97
CHRNE-201ENST00000293780 L1TD1Q5T7N2 865 aaKnown RBP21.1■□□□□ 0.97
CHRNE-201ENST00000293780 GCC1Q96CN9 775 aa21.1■□□□□ 0.97
CHRNE-201ENST00000293780 PIK3R4Q99570 1358 aa21.09■□□□□ 0.97
CHRNE-201ENST00000293780 CPSF1Q10570 1443 aaKnown RBP21.09■□□□□ 0.97
CHRNE-201ENST00000293780 DLC1Q96QB1 1528 aa21.09■□□□□ 0.97
CHRNE-201ENST00000293780 ABCC4O15439 1325 aa21.08■□□□□ 0.97
CHRNE-201ENST00000293780 TRAK2O60296 914 aa21.08■□□□□ 0.97
CHRNE-201ENST00000293780 FAM43AQ8N2R8 423 aa21.08■□□□□ 0.97
CHRNE-201ENST00000293780 KIF2CQ99661 725 aa21.08■□□□□ 0.97
CHRNE-201ENST00000293780 EDC4Q6P2E9 1401 aaKnown RBP21.07■□□□□ 0.96
CHRNE-201ENST00000293780 XRCC6P12956 609 aaKnown RBP eCLIP21.07■□□□□ 0.96
CHRNE-201ENST00000293780 DDIT3P35638 169 aa21.07■□□□□ 0.96
CHRNE-201ENST00000293780 SNX21Q969T3 373 aa21.07■□□□□ 0.96
CHRNE-201ENST00000293780 NUDT16Q96DE0 195 aaKnown RBP21.07■□□□□ 0.96
CHRNE-201ENST00000293780 CFAP44Q96MT7 982 aa21.07■□□□□ 0.96
CHRNE-201ENST00000293780 METP08581 1390 aa21.07■□□□□ 0.96
CHRNE-201ENST00000293780 EIF5BO60841 1220 aaKnown RBP21.06■□□□□ 0.96
CHRNE-201ENST00000293780 SETD1AO15047 1707 aaKnown RBP21.06■□□□□ 0.96
CHRNE-201ENST00000293780 TBC1D9Q6ZT07 1266 aa21.06■□□□□ 0.96
CHRNE-201ENST00000293780 CD2BP2O95400 341 aaKnown RBP21.05■□□□□ 0.96
CHRNE-201ENST00000293780 COG3Q96JB2 828 aa21.05■□□□□ 0.96
CHRNE-201ENST00000293780 NCOA3Q9Y6Q9 1424 aa21.05■□□□□ 0.96
CHRNE-201ENST00000293780 GOLGA6L3A6NEY3 463 aa21.05■□□□□ 0.96
CHRNE-201ENST00000293780 CHMP4BQ9H444 224 aaKnown RBP21.05■□□□□ 0.96
CHRNE-201ENST00000293780 DLG5Q8TDM6 1919 aa21.05■□□□□ 0.96
CHRNE-201ENST00000293780 CPS1P31327 1500 aa21.05■□□□□ 0.96
CHRNE-201ENST00000293780 FSD2A1L4K1 749 aa21.04■□□□□ 0.96
CHRNE-201ENST00000293780 CDK12Q9NYV4 1490 aaPredicted RBP21.04■□□□□ 0.96
CHRNE-201ENST00000293780 RBM42Q9BTD8 480 aaKnown RBP21.04■□□□□ 0.96
CHRNE-201ENST00000293780 HSP90AB1P08238 724 aaKnown RBP21.03■□□□□ 0.96
CHRNE-201ENST00000293780 FOXD4L1Q9NU39 408 aa21.03■□□□□ 0.96
CHRNE-201ENST00000293780 AATKQ6ZMQ8 1374 aa21.03■□□□□ 0.96
CHRNE-201ENST00000293780 PANK2Q9BZ23 570 aa21.02■□□□□ 0.96
CHRNE-201ENST00000293780 AEBP1Q8IUX7 1158 aa21.02■□□□□ 0.96
CHRNE-201ENST00000293780 LMOD3Q0VAK6 560 aa21.01■□□□□ 0.95
CHRNE-201ENST00000293780 KRT24Q2M2I5 525 aa21.01■□□□□ 0.95
CHRNE-201ENST00000293780 TNPO1Q92973 898 aaKnown RBP21.01■□□□□ 0.95
CHRNE-201ENST00000293780 API5Q9BZZ5 524 aaKnown RBP21.01■□□□□ 0.95
CHRNE-201ENST00000293780 RRAGDQ9NQL2 400 aaPredicted RBP21.01■□□□□ 0.95
CHRNE-201ENST00000293780 CCDC61Q9Y6R9 512 aa21.01■□□□□ 0.95
CHRNE-201ENST00000293780 UBE2Q2Q8WVN8 375 aa21.01■□□□□ 0.95
CHRNE-201ENST00000293780 GSPT1P15170 499 aaKnown RBP20.99■□□□□ 0.95
CHRNE-201ENST00000293780 NRXN3Q9Y4C0 1643 aa20.99■□□□□ 0.95
CHRNE-201ENST00000293780 SPATA31D1Q6ZQQ2 1576 aa20.99■□□□□ 0.95
CHRNE-201ENST00000293780 C16orf71Q8IYS4 520 aaPredicted RBP20.98■□□□□ 0.95
CHRNE-201ENST00000293780 PPP6R1Q9UPN7 881 aa20.98■□□□□ 0.95
CHRNE-201ENST00000293780 DDX11L8A8MPP1 907 aa20.98■□□□□ 0.95
CHRNE-201ENST00000293780 PLEKHM2Q8IWE5 1019 aa20.98■□□□□ 0.95
CHRNE-201ENST00000293780 PRR36Q9H6K5 1346 aa20.97■□□□□ 0.95
CHRNE-201ENST00000293780 SULT6B1Q6IMI4 303 aa20.97■□□□□ 0.95
CHRNE-201ENST00000293780 KNDC1Q76NI1 1749 aa20.97■□□□□ 0.95
CHRNE-201ENST00000293780 ESF1Q9H501 851 aaKnown RBP20.97■□□□□ 0.95
CHRNE-201ENST00000293780 EIF4A2Q14240 407 aaKnown RBP20.96■□□□□ 0.95
CHRNE-201ENST00000293780 DCTPP1Q9H773 170 aa20.96■□□□□ 0.95
CHRNE-201ENST00000293780 CDC45O75419 566 aa20.95■□□□□ 0.94
CHRNE-201ENST00000293780 HSP90AA1P07900 732 aaKnown RBP20.95■□□□□ 0.94
CHRNE-201ENST00000293780 RAB3GAP1Q15042 981 aa20.95■□□□□ 0.94
CHRNE-201ENST00000293780 MCM10Q7L590 875 aa20.95■□□□□ 0.94
CHRNE-201ENST00000293780 K7ELQ4 463 aaPredicted RBP20.94■□□□□ 0.94
CHRNE-201ENST00000293780 NUTM2FA1L443 756 aa20.94■□□□□ 0.94
CHRNE-201ENST00000293780 CIZ1Q9ULV3 898 aaPredicted RBP20.94■□□□□ 0.94
CHRNE-201ENST00000293780 MON2Q7Z3U7 1717 aa20.93■□□□□ 0.94
CHRNE-201ENST00000293780 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.93■□□□□ 0.94
CHRNE-201ENST00000293780 OTUD7AQ8TE49 926 aaPredicted RBP20.93■□□□□ 0.94
CHRNE-201ENST00000293780 INTS3Q68E01 1043 aaKnown RBP20.93■□□□□ 0.94
CHRNE-201ENST00000293780 GAS2L2Q8NHY3 880 aa20.93■□□□□ 0.94
CHRNE-201ENST00000293780 C3P01024 1663 aa20.91■□□□□ 0.94
CHRNE-201ENST00000293780 APBB1O00213 710 aa20.9■□□□□ 0.94
CHRNE-201ENST00000293780 CHL1O00533 1208 aa20.9■□□□□ 0.94
CHRNE-201ENST00000293780 TTC22Q5TAA0 569 aa20.9■□□□□ 0.94
CHRNE-201ENST00000293780 ANKRD44Q8N8A2 993 aa20.9■□□□□ 0.94
CHRNE-201ENST00000293780 KIF24Q5T7B8 1368 aa20.9■□□□□ 0.94
CHRNE-201ENST00000293780 RGS12O14924 1447 aa20.9■□□□□ 0.94
CHRNE-201ENST00000293780 HSP90AB2PQ58FF8 381 aa20.9■□□□□ 0.94
CHRNE-201ENST00000293780 SOX12O15370 315 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms