RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 MBIPQ9NS73 344 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 ADGBQ8N7X0 1667 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 LRRIQ1Q96JM4 1722 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 PHACTR3Q96KR7 559 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 UPF3BQ9BZI7 483 aaKnown RBP5.82□□□□□ -1.48
UBR1-201ENST00000290650 ASXL1Q8IXJ9 1541 aa5.82□□□□□ -1.48
UBR1-201ENST00000290650 PTCD1O75127 700 aaKnown RBP5.81□□□□□ -1.48
UBR1-201ENST00000290650 FCHSD2O94868 740 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 FSD1Q9BTV5 496 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 LRPPRCP42704 1394 aaKnown RBP5.81□□□□□ -1.48
UBR1-201ENST00000290650 WASHC4Q2M389 1173 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 DUOX2Q9NRD8 1548 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 ABCC10Q5T3U5 1492 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 NUTM2BA6NNL0 878 aaPredicted RBP5.81□□□□□ -1.48
UBR1-201ENST00000290650 NUTM2EB1AL46 878 aaPredicted RBP5.81□□□□□ -1.48
UBR1-201ENST00000290650 WASLO00401 505 aaPredicted RBP5.81□□□□□ -1.48
UBR1-201ENST00000290650 KIAA2012Q0VF49 1180 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 NUTM2AQ8IVF1 878 aaPredicted RBP5.81□□□□□ -1.48
UBR1-201ENST00000290650 CFAP44Q96MT7 982 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 PLCH2O75038 1416 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 FIBPO43427 364 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 PDE4CQ08493 712 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 ZNF592Q92610 1267 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 SYAP1Q96A49 352 aaPredicted RBP5.81□□□□□ -1.48
UBR1-201ENST00000290650 SMC3Q9UQE7 1217 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 PARD3Q8TEW0 1356 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 CLSTN1O94985 981 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 C8orf58Q8NAV2 365 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 GAS2L2Q8NHY3 880 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 UGGT1Q9NYU2 1555 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 ATAD2Q6PL18 1390 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 RNF123Q5XPI4 1314 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 TBC1D2Q9BYX2 928 aa5.81□□□□□ -1.48
UBR1-201ENST00000290650 CHAF1AQ13111 956 aaPredicted RBP5.8□□□□□ -1.48
UBR1-201ENST00000290650 LRRCC1Q9C099 1032 aa5.8□□□□□ -1.48
UBR1-201ENST00000290650 DDX58O95786 925 aaKnown RBP5.8□□□□□ -1.48
UBR1-201ENST00000290650 BICD2Q8TD16 824 aa5.8□□□□□ -1.48
UBR1-201ENST00000290650 ACEP12821 1306 aa5.8□□□□□ -1.48
UBR1-201ENST00000290650 LRRFIP2Q9Y608 721 aaKnown RBP5.8□□□□□ -1.48
UBR1-201ENST00000290650 ZKSCAN1P17029 563 aaPredicted RBP5.8□□□□□ -1.48
UBR1-201ENST00000290650 TOM1L2Q6ZVM7 507 aa5.8□□□□□ -1.48
UBR1-201ENST00000290650 PES1O00541 588 aaKnown RBP5.8□□□□□ -1.48
UBR1-201ENST00000290650 GNAT3A8MTJ3 354 aa5.8□□□□□ -1.48
UBR1-201ENST00000290650 CDK11BP21127 795 aaKnown RBP5.8□□□□□ -1.48
UBR1-201ENST00000290650 CHRNA2Q15822 529 aa5.8□□□□□ -1.48
UBR1-201ENST00000290650 AACSQ86V21 672 aa5.8□□□□□ -1.48
UBR1-201ENST00000290650 GDPD2Q9HCC8 539 aa5.8□□□□□ -1.48
UBR1-201ENST00000290650 SAMD1Q6SPF0 538 aaPredicted RBP5.79□□□□□ -1.48
UBR1-201ENST00000290650 RASSF8Q8NHQ8 419 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 CLASRPQ8N2M8 674 aaKnown RBP5.79□□□□□ -1.48
UBR1-201ENST00000290650 ATP2B1P20020 1258 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 NASPP49321 788 aaPredicted RBP5.79□□□□□ -1.48
UBR1-201ENST00000290650 THEMISQ8N1K5 641 aaPredicted RBP5.79□□□□□ -1.48
UBR1-201ENST00000290650 SPC24Q8NBT2 197 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 GCC1Q96CN9 775 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 ZNF692Q9BU19 519 aaPredicted RBP5.79□□□□□ -1.48
UBR1-201ENST00000290650 CNTROBQ8N137 903 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 RPGRIP1LQ68CZ1 1315 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 GOLGA6L6A8MZA4 724 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 TAF7Q15545 349 aaPredicted RBP5.79□□□□□ -1.48
UBR1-201ENST00000290650 MEIS3Q99687 375 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 K7ELQ4 463 aaPredicted RBP5.79□□□□□ -1.48
UBR1-201ENST00000290650 C8orf34Q49A92 452 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 PLEKHO1Q53GL0 409 aaPredicted RBP5.79□□□□□ -1.48
UBR1-201ENST00000290650 CABLES1Q8TDN4 633 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 LRRC59Q96AG4 307 aaKnown RBP5.79□□□□□ -1.48
UBR1-201ENST00000290650 CCDC8Q9H0W5 538 aaPredicted RBP5.79□□□□□ -1.48
UBR1-201ENST00000290650 FAM13BQ9NYF5 915 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 CHD1O14646 1710 aa5.79□□□□□ -1.48
UBR1-201ENST00000290650 CABP4P57796 275 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 FKBP4Q02790 459 aaKnown RBP eCLIP5.78□□□□□ -1.48
UBR1-201ENST00000290650 NCBP3Q53F19 620 aaKnown RBP5.78□□□□□ -1.48
UBR1-201ENST00000290650 RRP12Q5JTH9 1297 aaKnown RBP5.78□□□□□ -1.48
UBR1-201ENST00000290650 BCORL1Q5H9F3 1711 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 SSFA2P28290 1259 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 PIP4K2BP78356 416 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 RUFY2Q8WXA3 655 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 A0A1W2PP64 1363 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 DENND4BO75064 1496 aaPredicted RBP5.78□□□□□ -1.48
UBR1-201ENST00000290650 NFXL1Q6ZNB6 911 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 TBC1D9Q6ZT07 1266 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 BOLA2Q9H3K6 86 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 SPG7Q9UQ90 795 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 MYO5CQ9NQX4 1742 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 WDR7Q9Y4E6 1490 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 ERC2O15083 957 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 GNAI3P08754 354 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 SRCIN1Q9C0H9 1055 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 VPS37DQ86XT2 251 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 ATP5J2-PTCD1G3V325 749 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 FERMT3Q86UX7 667 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 POLKQ9UBT6 870 aa5.78□□□□□ -1.48
UBR1-201ENST00000290650 SLC39A6Q13433 755 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 FMNL2Q96PY5 1086 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 PPIP5K1Q6PFW1 1433 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 RBM10P98175 930 aaKnown RBP5.77□□□□□ -1.49
UBR1-201ENST00000290650 VPS53Q5VIR6 699 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 DDX11Q96FC9 970 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 ERCC6L2Q5T890 1561 aa5.77□□□□□ -1.49
UBR1-201ENST00000290650 PTMSP20962 102 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms