RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
SCAF4-201ENST00000286835 TSHZ3Q63HK5 1081 aa16.38■□□□□ 0.21
SCAF4-201ENST00000286835 CHAMP1Q96JM3 812 aa16.38■□□□□ 0.21
SCAF4-201ENST00000286835 ERBB4Q15303 1308 aa16.38■□□□□ 0.21
SCAF4-201ENST00000286835 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
SCAF4-201ENST00000286835 TPM2P07951 284 aa16.38■□□□□ 0.21
SCAF4-201ENST00000286835 THEMISQ8N1K5 641 aaPredicted RBP16.38■□□□□ 0.21
SCAF4-201ENST00000286835 MIS18AQ9NYP9 233 aa16.38■□□□□ 0.21
SCAF4-201ENST00000286835 KDM5AP29375 1690 aaKnown RBP16.37■□□□□ 0.21
SCAF4-201ENST00000286835 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
SCAF4-201ENST00000286835 RBM33Q96EV2 1170 aaKnown RBP16.37■□□□□ 0.21
SCAF4-201ENST00000286835 ZGPATQ8N5A5 531 aaKnown RBP16.37■□□□□ 0.21
SCAF4-201ENST00000286835 KIAA2012Q0VF49 1180 aa16.36■□□□□ 0.21
SCAF4-201ENST00000286835 OTUD7AQ8TE49 926 aaPredicted RBP16.36■□□□□ 0.21
SCAF4-201ENST00000286835 ANKRD36BQ8N2N9 1353 aa16.36■□□□□ 0.21
SCAF4-201ENST00000286835 OS9Q13438 667 aaPredicted RBP16.36■□□□□ 0.21
SCAF4-201ENST00000286835 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
SCAF4-201ENST00000286835 C8orf58Q8NAV2 365 aa16.36■□□□□ 0.21
SCAF4-201ENST00000286835 ABCC11Q96J66 1382 aa16.36■□□□□ 0.21
SCAF4-201ENST00000286835 ZBTB7BO15156 539 aaPredicted RBP16.35■□□□□ 0.21
SCAF4-201ENST00000286835 KLHL40Q2TBA0 621 aa16.35■□□□□ 0.21
SCAF4-201ENST00000286835 RPGRIP1LQ68CZ1 1315 aa16.35■□□□□ 0.21
SCAF4-201ENST00000286835 GDPD2Q9HCC8 539 aa16.35■□□□□ 0.21
SCAF4-201ENST00000286835 ZNF518AQ6AHZ1 1483 aa16.35■□□□□ 0.21
SCAF4-201ENST00000286835 A0A1W2PP64 1363 aa16.35■□□□□ 0.21
SCAF4-201ENST00000286835 VAMP4O75379 141 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 PKP1Q13835 747 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 PREX2Q70Z35 1606 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 CDC42BPBQ9Y5S2 1711 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 ZSCAN23Q3MJ62 389 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 SYAP1Q96A49 352 aaPredicted RBP16.34■□□□□ 0.21
SCAF4-201ENST00000286835 EXOC6BQ9Y2D4 811 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 SULT6B1Q6IMI4 303 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 MCM10Q7L590 875 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 STK31Q9BXU1 1019 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 PRIM1P49642 420 aaKnown RBP16.34■□□□□ 0.21
SCAF4-201ENST00000286835 PSME1Q06323 249 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 NME9Q86XW9 330 aa16.34■□□□□ 0.21
SCAF4-201ENST00000286835 MRPL50Q8N5N7 158 aaKnown RBP16.33■□□□□ 0.21
SCAF4-201ENST00000286835 UPF3BQ9BZI7 483 aaKnown RBP16.33■□□□□ 0.21
SCAF4-201ENST00000286835 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
SCAF4-201ENST00000286835 MYO5CQ9NQX4 1742 aa16.33■□□□□ 0.2
SCAF4-201ENST00000286835 UQCRHLA0A096LP55 91 aa16.33■□□□□ 0.2
SCAF4-201ENST00000286835 UQCRHP07919 91 aa16.33■□□□□ 0.2
SCAF4-201ENST00000286835 KCNJ4P48050 445 aa16.33■□□□□ 0.2
SCAF4-201ENST00000286835 F6X3S4 739 aa16.32■□□□□ 0.2
SCAF4-201ENST00000286835 SDSP20132 328 aa16.31■□□□□ 0.2
SCAF4-201ENST00000286835 IQGAP3Q86VI3 1631 aa16.31■□□□□ 0.2
SCAF4-201ENST00000286835 ERC2O15083 957 aa16.31■□□□□ 0.2
SCAF4-201ENST00000286835 FKBP5Q13451 457 aaPredicted RBP16.31■□□□□ 0.2
SCAF4-201ENST00000286835 IL16Q14005 1332 aa16.31■□□□□ 0.2
SCAF4-201ENST00000286835 CHD1O14646 1710 aa16.31■□□□□ 0.2
SCAF4-201ENST00000286835 MAP4K4O95819 1239 aaPredicted RBP16.3■□□□□ 0.2
SCAF4-201ENST00000286835 NLRP6P59044 892 aa16.3■□□□□ 0.2
SCAF4-201ENST00000286835 PLEKHM2Q8IWE5 1019 aa16.3■□□□□ 0.2
SCAF4-201ENST00000286835 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
SCAF4-201ENST00000286835 BCL11BQ9C0K0 894 aaPredicted RBP16.3■□□□□ 0.2
SCAF4-201ENST00000286835 TTC22Q5TAA0 569 aa16.3■□□□□ 0.2
SCAF4-201ENST00000286835 PLEKHF1Q96S99 279 aa16.3■□□□□ 0.2
SCAF4-201ENST00000286835 LARP6Q9BRS8 491 aaKnown RBP16.3■□□□□ 0.2
SCAF4-201ENST00000286835 RBSNQ9H1K0 784 aa16.29■□□□□ 0.2
SCAF4-201ENST00000286835 UNC13BO14795 1591 aa16.29■□□□□ 0.2
SCAF4-201ENST00000286835 MADDQ8WXG6 1647 aa16.29■□□□□ 0.2
SCAF4-201ENST00000286835 POLKQ9UBT6 870 aa16.29■□□□□ 0.2
SCAF4-201ENST00000286835 TSPYL4Q9UJ04 414 aa16.29■□□□□ 0.2
SCAF4-201ENST00000286835 ZNF428Q96B54 188 aa16.28■□□□□ 0.2
SCAF4-201ENST00000286835 MEIS3Q99687 375 aa16.28■□□□□ 0.2
SCAF4-201ENST00000286835 CWC22Q9HCG8 908 aaKnown RBP16.28■□□□□ 0.2
SCAF4-201ENST00000286835 IFT57Q9NWB7 429 aa16.28■□□□□ 0.2
SCAF4-201ENST00000286835 POGZQ7Z3K3 1410 aa16.28■□□□□ 0.2
SCAF4-201ENST00000286835 CLASP1Q7Z460 1538 aa16.28■□□□□ 0.2
SCAF4-201ENST00000286835 GSPT1P15170 499 aaKnown RBP16.28■□□□□ 0.2
SCAF4-201ENST00000286835 DRC7Q8IY82 874 aa16.28■□□□□ 0.2
SCAF4-201ENST00000286835 NSD2O96028 1365 aa16.28■□□□□ 0.2
SCAF4-201ENST00000286835 ZNF692Q9BU19 519 aaPredicted RBP16.27■□□□□ 0.2
SCAF4-201ENST00000286835 ESCO1Q5FWF5 840 aa16.27■□□□□ 0.2
SCAF4-201ENST00000286835 CCDC39Q9UFE4 941 aa16.27■□□□□ 0.2
SCAF4-201ENST00000286835 NLRP1Q9C000 1473 aa16.27■□□□□ 0.19
SCAF4-201ENST00000286835 PROSER2Q86WR7 435 aaPredicted RBP16.27■□□□□ 0.19
SCAF4-201ENST00000286835 ANKLE2Q86XL3 938 aa16.27■□□□□ 0.19
SCAF4-201ENST00000286835 CLTCL1P53675 1640 aa16.27■□□□□ 0.19
SCAF4-201ENST00000286835 TRPM2O94759 1503 aa16.27■□□□□ 0.19
SCAF4-201ENST00000286835 IL1RAPL2Q9NP60 686 aa16.27■□□□□ 0.19
SCAF4-201ENST00000286835 TAOK2Q9UL54 1235 aa16.27■□□□□ 0.19
SCAF4-201ENST00000286835 TSPY26PQ9H489 355 aa16.26■□□□□ 0.19
SCAF4-201ENST00000286835 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.26■□□□□ 0.19
SCAF4-201ENST00000286835 DTNBO60941 627 aa16.26■□□□□ 0.19
SCAF4-201ENST00000286835 PRDM10Q9NQV6 1147 aa16.26■□□□□ 0.19
SCAF4-201ENST00000286835 GOLGA6L4A6NEF3 574 aa16.25■□□□□ 0.19
SCAF4-201ENST00000286835 FIBPO43427 364 aa16.25■□□□□ 0.19
SCAF4-201ENST00000286835 SIRT2Q8IXJ6 389 aa16.25■□□□□ 0.19
SCAF4-201ENST00000286835 CSPP1Q1MSJ5 1256 aa16.25■□□□□ 0.19
SCAF4-201ENST00000286835 ZNF830Q96NB3 372 aaPredicted RBP16.25■□□□□ 0.19
SCAF4-201ENST00000286835 USP26Q9BXU7 913 aa16.25■□□□□ 0.19
SCAF4-201ENST00000286835 PDCL3Q9H2J4 239 aa16.25■□□□□ 0.19
SCAF4-201ENST00000286835 PHF14O94880 888 aa16.25■□□□□ 0.19
SCAF4-201ENST00000286835 RTEL1-TNFRSF6BF6WH68 1400 aa16.24■□□□□ 0.19
SCAF4-201ENST00000286835 PPIP5K1Q6PFW1 1433 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms