RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 PXDNQ92626 1479 aa12.97□□□□□ -0.33
CPNE9-201ENST00000273027 ABCC11Q96J66 1382 aa12.97□□□□□ -0.33
CPNE9-201ENST00000273027 KNDC1Q76NI1 1749 aa12.97□□□□□ -0.33
CPNE9-201ENST00000273027 TRAK1Q9UPV9 953 aa12.97□□□□□ -0.33
CPNE9-201ENST00000273027 GLI3P10071 1580 aa12.97□□□□□ -0.33
CPNE9-201ENST00000273027 CDC42BPGQ6DT37 1551 aa12.97□□□□□ -0.33
CPNE9-201ENST00000273027 TULP4Q9NRJ4 1543 aa12.97□□□□□ -0.33
CPNE9-201ENST00000273027 BRWD3Q6RI45 1802 aa12.97□□□□□ -0.33
CPNE9-201ENST00000273027 LRP5O75197 1615 aa12.96□□□□□ -0.33
CPNE9-201ENST00000273027 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
CPNE9-201ENST00000273027 VPS72Q15906 364 aa12.96□□□□□ -0.33
CPNE9-201ENST00000273027 CABLES1Q8TDN4 633 aa12.96□□□□□ -0.33
CPNE9-201ENST00000273027 STK26Q9P289 416 aa12.96□□□□□ -0.33
CPNE9-201ENST00000273027 DAXXQ9UER7 740 aaPredicted RBP12.96□□□□□ -0.33
CPNE9-201ENST00000273027 SLIT2O94813 1529 aa12.96□□□□□ -0.33
CPNE9-201ENST00000273027 IL16Q14005 1332 aa12.95□□□□□ -0.34
CPNE9-201ENST00000273027 SPATA31A3Q5VYP0 1347 aa12.95□□□□□ -0.34
CPNE9-201ENST00000273027 DLC1Q96QB1 1528 aa12.95□□□□□ -0.34
CPNE9-201ENST00000273027 ONECUT3O60422 494 aaPredicted RBP12.95□□□□□ -0.34
CPNE9-201ENST00000273027 R3HDM1Q15032 1099 aaKnown RBP12.95□□□□□ -0.34
CPNE9-201ENST00000273027 KRT28Q7Z3Y7 464 aa12.95□□□□□ -0.34
CPNE9-201ENST00000273027 WAPLQ7Z5K2 1190 aa12.95□□□□□ -0.34
CPNE9-201ENST00000273027 TERF2IPQ9NYB0 399 aa12.95□□□□□ -0.34
CPNE9-201ENST00000273027 SENP3-EIF4A1A0A087X0R7 540 aa12.94□□□□□ -0.34
CPNE9-201ENST00000273027 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
CPNE9-201ENST00000273027 C20orf194Q5TEA3 1177 aa12.94□□□□□ -0.34
CPNE9-201ENST00000273027 LMOD2Q6P5Q4 547 aa12.94□□□□□ -0.34
CPNE9-201ENST00000273027 CCDC146Q8IYE0 955 aa12.94□□□□□ -0.34
CPNE9-201ENST00000273027 DEKP35659 375 aaKnown RBP12.93□□□□□ -0.34
CPNE9-201ENST00000273027 TCP11L2Q8N4U5 519 aa12.93□□□□□ -0.34
CPNE9-201ENST00000273027 CLUAP1Q96AJ1 413 aa12.93□□□□□ -0.34
CPNE9-201ENST00000273027 CANXP27824 592 aaKnown RBP12.92□□□□□ -0.34
CPNE9-201ENST00000273027 ZNF428Q96B54 188 aa12.92□□□□□ -0.34
CPNE9-201ENST00000273027 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.92□□□□□ -0.34
CPNE9-201ENST00000273027 SLC12A5Q9H2X9 1139 aa12.92□□□□□ -0.34
CPNE9-201ENST00000273027 TECPR2O15040 1411 aa12.91□□□□□ -0.34
CPNE9-201ENST00000273027 KIF20BQ96Q89 1820 aa12.91□□□□□ -0.34
CPNE9-201ENST00000273027 YY1P25490 414 aa12.91□□□□□ -0.34
CPNE9-201ENST00000273027 MTHFSP49914 203 aa12.91□□□□□ -0.34
CPNE9-201ENST00000273027 FAM98CQ17RN3 349 aaKnown RBP12.91□□□□□ -0.34
CPNE9-201ENST00000273027 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
CPNE9-201ENST00000273027 FMN2Q9NZ56 1722 aa12.91□□□□□ -0.34
CPNE9-201ENST00000273027 KIF1AQ12756 1690 aa12.9□□□□□ -0.34
CPNE9-201ENST00000273027 FAM83GA6ND36 823 aa12.9□□□□□ -0.34
CPNE9-201ENST00000273027 RARSP54136 660 aaKnown RBP12.9□□□□□ -0.34
CPNE9-201ENST00000273027 PSME1Q06323 249 aa12.9□□□□□ -0.34
CPNE9-201ENST00000273027 CHMP4BQ9H444 224 aaKnown RBP12.9□□□□□ -0.34
CPNE9-201ENST00000273027 C8orf34Q49A92 452 aa12.89□□□□□ -0.35
CPNE9-201ENST00000273027 BCL11AQ9H165 835 aa12.89□□□□□ -0.35
CPNE9-201ENST00000273027 RWDD1Q9H446 243 aaPredicted RBP12.89□□□□□ -0.35
CPNE9-201ENST00000273027 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
CPNE9-201ENST00000273027 BCAR3O75815 825 aa12.88□□□□□ -0.35
CPNE9-201ENST00000273027 TMEM132EQ6IEE7 984 aa12.88□□□□□ -0.35
CPNE9-201ENST00000273027 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
CPNE9-201ENST00000273027 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
CPNE9-201ENST00000273027 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
CPNE9-201ENST00000273027 ATP7BP35670 1465 aa12.88□□□□□ -0.35
CPNE9-201ENST00000273027 PHF8Q9UPP1 1060 aa12.87□□□□□ -0.35
CPNE9-201ENST00000273027 RGPD8O14715 1765 aaPredicted RBP12.86□□□□□ -0.35
CPNE9-201ENST00000273027 CALD1Q05682 793 aaKnown RBP12.86□□□□□ -0.35
CPNE9-201ENST00000273027 BECN1Q14457 450 aa12.86□□□□□ -0.35
CPNE9-201ENST00000273027 NBR1Q14596 966 aa12.86□□□□□ -0.35
CPNE9-201ENST00000273027 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
CPNE9-201ENST00000273027 BTG4Q9NY30 223 aa12.86□□□□□ -0.35
CPNE9-201ENST00000273027 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
CPNE9-201ENST00000273027 A0A1W2PP64 1363 aa12.85□□□□□ -0.35
CPNE9-201ENST00000273027 NEFMP07197 916 aa12.85□□□□□ -0.35
CPNE9-201ENST00000273027 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
CPNE9-201ENST00000273027 SIRT1Q96EB6 747 aa12.85□□□□□ -0.35
CPNE9-201ENST00000273027 UPF2Q9HAU5 1272 aaKnown RBP12.85□□□□□ -0.35
CPNE9-201ENST00000273027 IPO8O15397 1037 aaKnown RBP12.84□□□□□ -0.35
CPNE9-201ENST00000273027 EIF5BO60841 1220 aaKnown RBP12.84□□□□□ -0.35
CPNE9-201ENST00000273027 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
CPNE9-201ENST00000273027 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
CPNE9-201ENST00000273027 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
CPNE9-201ENST00000273027 KIF16BQ96L93 1317 aa12.84□□□□□ -0.35
CPNE9-201ENST00000273027 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
CPNE9-201ENST00000273027 FCHSD2O94868 740 aa12.83□□□□□ -0.36
CPNE9-201ENST00000273027 SRPK2P78362 688 aaKnown RBP12.83□□□□□ -0.36
CPNE9-201ENST00000273027 ALDH1L2Q3SY69 923 aa12.83□□□□□ -0.36
CPNE9-201ENST00000273027 POGKQ9P215 609 aa12.83□□□□□ -0.36
CPNE9-201ENST00000273027 PPIP5K1Q6PFW1 1433 aa12.82□□□□□ -0.36
CPNE9-201ENST00000273027 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
CPNE9-201ENST00000273027 TRIM37O94972 964 aa12.82□□□□□ -0.36
CPNE9-201ENST00000273027 MVPQ14764 893 aaKnown RBP12.82□□□□□ -0.36
CPNE9-201ENST00000273027 CAMKK2Q96RR4 588 aa12.82□□□□□ -0.36
CPNE9-201ENST00000273027 PLEKHF1Q96S99 279 aa12.82□□□□□ -0.36
CPNE9-201ENST00000273027 DDX19BQ9UMR2 479 aa12.82□□□□□ -0.36
CPNE9-201ENST00000273027 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
CPNE9-201ENST00000273027 PLCH1Q4KWH8 1693 aa12.81□□□□□ -0.36
CPNE9-201ENST00000273027 CD163L1Q9NR16 1453 aa12.81□□□□□ -0.36
CPNE9-201ENST00000273027 DIAPH1O60610 1272 aaKnown RBP12.81□□□□□ -0.36
CPNE9-201ENST00000273027 APBA3O96018 575 aa12.81□□□□□ -0.36
CPNE9-201ENST00000273027 TMPOP42166 694 aaKnown RBP12.81□□□□□ -0.36
CPNE9-201ENST00000273027 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
CPNE9-201ENST00000273027 COG6Q9Y2V7 657 aa12.81□□□□□ -0.36
CPNE9-201ENST00000273027 NWD2Q9ULI1 1742 aa12.81□□□□□ -0.36
CPNE9-201ENST00000273027 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
CPNE9-201ENST00000273027 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
CPNE9-201ENST00000273027 IGHDP01880 384 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms