RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 K7ELQ4 463 aaPredicted RBP13.33□□□□□ -0.28
CNGA3-201ENST00000272602 EXOSC9Q06265 439 aaKnown RBP13.33□□□□□ -0.28
CNGA3-201ENST00000272602 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
CNGA3-201ENST00000272602 C1orf115Q9H7X2 142 aa13.33□□□□□ -0.28
CNGA3-201ENST00000272602 PHF8Q9UPP1 1060 aa13.33□□□□□ -0.28
CNGA3-201ENST00000272602 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
CNGA3-201ENST00000272602 RBM27Q9P2N5 1060 aaKnown RBP13.32□□□□□ -0.28
CNGA3-201ENST00000272602 NSD3Q9BZ95 1437 aa13.32□□□□□ -0.28
CNGA3-201ENST00000272602 CIZ1Q9ULV3 898 aaPredicted RBP13.32□□□□□ -0.28
CNGA3-201ENST00000272602 DDX19BQ9UMR2 479 aa13.32□□□□□ -0.28
CNGA3-201ENST00000272602 MAGI2Q86UL8 1455 aa13.32□□□□□ -0.28
CNGA3-201ENST00000272602 CD2BP2O95400 341 aaKnown RBP13.32□□□□□ -0.28
CNGA3-201ENST00000272602 BAG4O95429 457 aaKnown RBP13.32□□□□□ -0.28
CNGA3-201ENST00000272602 GAS2L2Q8NHY3 880 aa13.32□□□□□ -0.28
CNGA3-201ENST00000272602 INSRP06213 1382 aa13.31□□□□□ -0.28
CNGA3-201ENST00000272602 NINLQ9Y2I6 1382 aa13.31□□□□□ -0.28
CNGA3-201ENST00000272602 HSP90AB2PQ58FF8 381 aa13.3□□□□□ -0.28
CNGA3-201ENST00000272602 TMEM2Q9UHN6 1383 aa13.3□□□□□ -0.28
CNGA3-201ENST00000272602 NLRP1Q9C000 1473 aa13.3□□□□□ -0.28
CNGA3-201ENST00000272602 SULT6B1Q6IMI4 303 aa13.3□□□□□ -0.28
CNGA3-201ENST00000272602 NOL8Q76FK4 1167 aaKnown RBP13.3□□□□□ -0.28
CNGA3-201ENST00000272602 TSC1Q92574 1164 aa13.3□□□□□ -0.28
CNGA3-201ENST00000272602 TRIM27P14373 513 aa13.3□□□□□ -0.28
CNGA3-201ENST00000272602 AAMPQ13685 434 aa13.3□□□□□ -0.28
CNGA3-201ENST00000272602 SMC5Q8IY18 1101 aa13.3□□□□□ -0.28
CNGA3-201ENST00000272602 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
CNGA3-201ENST00000272602 NOB1Q9ULX3 412 aaKnown RBP13.3□□□□□ -0.28
CNGA3-201ENST00000272602 KIDINS220Q9ULH0 1771 aa13.3□□□□□ -0.28
CNGA3-201ENST00000272602 MAST1Q9Y2H9 1570 aa13.29□□□□□ -0.28
CNGA3-201ENST00000272602 PRIM1P49642 420 aaKnown RBP13.29□□□□□ -0.28
CNGA3-201ENST00000272602 CBX1P83916 185 aa13.29□□□□□ -0.28
CNGA3-201ENST00000272602 TMEM57Q8N5G2 664 aa13.29□□□□□ -0.28
CNGA3-201ENST00000272602 KRT28Q7Z3Y7 464 aa13.29□□□□□ -0.28
CNGA3-201ENST00000272602 DDX54Q8TDD1 881 aaKnown RBP13.29□□□□□ -0.28
CNGA3-201ENST00000272602 FAM177BA6PVY3 158 aa13.29□□□□□ -0.28
CNGA3-201ENST00000272602 FYB1O15117 783 aa13.29□□□□□ -0.28
CNGA3-201ENST00000272602 KLHL40Q2TBA0 621 aa13.29□□□□□ -0.28
CNGA3-201ENST00000272602 RBSNQ9H1K0 784 aa13.29□□□□□ -0.28
CNGA3-201ENST00000272602 SYCE3A1L190 88 aa13.28□□□□□ -0.28
CNGA3-201ENST00000272602 CHAMP1Q96JM3 812 aa13.28□□□□□ -0.28
CNGA3-201ENST00000272602 ABCA6Q8N139 1617 aa13.28□□□□□ -0.28
CNGA3-201ENST00000272602 DIAPH1O60610 1272 aaKnown RBP13.28□□□□□ -0.28
CNGA3-201ENST00000272602 ZSCAN23Q3MJ62 389 aa13.28□□□□□ -0.28
CNGA3-201ENST00000272602 SSH1Q8WYL5 1049 aa13.28□□□□□ -0.28
CNGA3-201ENST00000272602 LRRC59Q96AG4 307 aaKnown RBP13.28□□□□□ -0.28
CNGA3-201ENST00000272602 PRKAR2BP31323 418 aa13.27□□□□□ -0.28
CNGA3-201ENST00000272602 PPP1R9BQ96SB3 815 aa13.27□□□□□ -0.28
CNGA3-201ENST00000272602 CSPP1Q1MSJ5 1256 aa13.27□□□□□ -0.29
CNGA3-201ENST00000272602 CHD1LQ86WJ1 897 aa13.27□□□□□ -0.29
CNGA3-201ENST00000272602 PRDM11Q9NQV5 511 aa13.27□□□□□ -0.29
CNGA3-201ENST00000272602 ABCC3O15438 1527 aa13.26□□□□□ -0.29
CNGA3-201ENST00000272602 ATF7IPQ6VMQ6 1270 aa13.26□□□□□ -0.29
CNGA3-201ENST00000272602 MEX3CQ5U5Q3 659 aaKnown RBP13.26□□□□□ -0.29
CNGA3-201ENST00000272602 AEBP1Q8IUX7 1158 aa13.26□□□□□ -0.29
CNGA3-201ENST00000272602 JARID2Q92833 1246 aaPredicted RBP13.26□□□□□ -0.29
CNGA3-201ENST00000272602 CEP152O94986 1710 aa13.26□□□□□ -0.29
CNGA3-201ENST00000272602 SNX21Q969T3 373 aa13.26□□□□□ -0.29
CNGA3-201ENST00000272602 ROBO2Q9HCK4 1378 aa13.26□□□□□ -0.29
CNGA3-201ENST00000272602 YTHDC2Q9H6S0 1430 aaKnown RBP13.25□□□□□ -0.29
CNGA3-201ENST00000272602 DIP2CQ9Y2E4 1556 aa13.25□□□□□ -0.29
CNGA3-201ENST00000272602 FAM83GA6ND36 823 aa13.25□□□□□ -0.29
CNGA3-201ENST00000272602 IGSF3O75054 1194 aa13.25□□□□□ -0.29
CNGA3-201ENST00000272602 PRDM4Q9UKN5 801 aa13.25□□□□□ -0.29
CNGA3-201ENST00000272602 IPO8O15397 1037 aaKnown RBP13.25□□□□□ -0.29
CNGA3-201ENST00000272602 EIF2S2P20042 333 aaKnown RBP13.25□□□□□ -0.29
CNGA3-201ENST00000272602 KIAA2012Q0VF49 1180 aa13.25□□□□□ -0.29
CNGA3-201ENST00000272602 WDR63Q8IWG1 891 aa13.25□□□□□ -0.29
CNGA3-201ENST00000272602 BCL11BQ9C0K0 894 aaPredicted RBP13.25□□□□□ -0.29
CNGA3-201ENST00000272602 PKP1Q13835 747 aa13.24□□□□□ -0.29
CNGA3-201ENST00000272602 TBC1D9Q6ZT07 1266 aa13.24□□□□□ -0.29
CNGA3-201ENST00000272602 ZNF830Q96NB3 372 aaPredicted RBP13.24□□□□□ -0.29
CNGA3-201ENST00000272602 ADGBQ8N7X0 1667 aa13.24□□□□□ -0.29
CNGA3-201ENST00000272602 SETD1BQ9UPS6 1966 aaKnown RBP13.24□□□□□ -0.29
CNGA3-201ENST00000272602 NUCB2P80303 420 aa13.24□□□□□ -0.29
CNGA3-201ENST00000272602 RTF1Q92541 710 aaKnown RBP13.24□□□□□ -0.29
CNGA3-201ENST00000272602 NOL7Q9UMY1 257 aaKnown RBP13.24□□□□□ -0.29
CNGA3-201ENST00000272602 ZKSCAN5Q9Y2L8 839 aa13.24□□□□□ -0.29
CNGA3-201ENST00000272602 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
CNGA3-201ENST00000272602 RBM25P49756 843 aaKnown RBP13.23□□□□□ -0.29
CNGA3-201ENST00000272602 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
CNGA3-201ENST00000272602 MTERF4Q7Z6M4 381 aaKnown RBP13.23□□□□□ -0.29
CNGA3-201ENST00000272602 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
CNGA3-201ENST00000272602 ASXL1Q8IXJ9 1541 aa13.23□□□□□ -0.29
CNGA3-201ENST00000272602 PIK3C2GO75747 1445 aa13.23□□□□□ -0.29
CNGA3-201ENST00000272602 KIF16BQ96L93 1317 aa13.23□□□□□ -0.29
CNGA3-201ENST00000272602 DYNC1I1O14576 645 aa13.23□□□□□ -0.29
CNGA3-201ENST00000272602 SASS6Q6UVJ0 657 aa13.23□□□□□ -0.29
CNGA3-201ENST00000272602 TBX22Q9Y458 520 aa13.23□□□□□ -0.29
CNGA3-201ENST00000272602 ERVK-7P63135 1459 aa13.23□□□□□ -0.29
CNGA3-201ENST00000272602 GPRASP1Q5JY77 1395 aa13.22□□□□□ -0.29
CNGA3-201ENST00000272602 TOM1L2Q6ZVM7 507 aa13.22□□□□□ -0.29
CNGA3-201ENST00000272602 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
CNGA3-201ENST00000272602 FAM182BQ5T319 152 aa13.22□□□□□ -0.29
CNGA3-201ENST00000272602 MCM10Q7L590 875 aa13.22□□□□□ -0.29
CNGA3-201ENST00000272602 PRR36Q9H6K5 1346 aa13.22□□□□□ -0.29
CNGA3-201ENST00000272602 HDAC1Q13547 482 aaPredicted RBP13.21□□□□□ -0.29
CNGA3-201ENST00000272602 E9PCH4 1651 aa13.21□□□□□ -0.29
CNGA3-201ENST00000272602 STAC3Q96MF2 364 aa13.21□□□□□ -0.3
CNGA3-201ENST00000272602 SMAP1Q8IYB5 467 aaPredicted RBP13.2□□□□□ -0.3
CNGA3-201ENST00000272602 ZGPATQ8N5A5 531 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms