RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 IRX6P78412 446 aaPredicted RBP16.45■□□□□ 0.22
CAPN9-201ENST00000271971 GOLGA2Q08379 1002 aa16.44■□□□□ 0.22
CAPN9-201ENST00000271971 BRINP3Q76B58 766 aa16.44■□□□□ 0.22
CAPN9-201ENST00000271971 WWC1Q8IX03 1113 aa16.44■□□□□ 0.22
CAPN9-201ENST00000271971 PXDNQ92626 1479 aa16.44■□□□□ 0.22
CAPN9-201ENST00000271971 SLIT3O75094 1523 aa16.44■□□□□ 0.22
CAPN9-201ENST00000271971 MSH5O43196 834 aa16.43■□□□□ 0.22
CAPN9-201ENST00000271971 FCHSD2O94868 740 aa16.43■□□□□ 0.22
CAPN9-201ENST00000271971 AEBP1Q8IUX7 1158 aa16.43■□□□□ 0.22
CAPN9-201ENST00000271971 NPHP3Q7Z494 1330 aa16.43■□□□□ 0.22
CAPN9-201ENST00000271971 ZBTB7CA1YPR0 619 aa16.42■□□□□ 0.22
CAPN9-201ENST00000271971 HOXC9P31274 260 aa16.42■□□□□ 0.22
CAPN9-201ENST00000271971 SLAIN2Q9P270 581 aa16.42■□□□□ 0.22
CAPN9-201ENST00000271971 DLG5Q8TDM6 1919 aa16.42■□□□□ 0.22
CAPN9-201ENST00000271971 MED1Q15648 1581 aaPredicted RBP16.42■□□□□ 0.22
CAPN9-201ENST00000271971 TMPOP42166 694 aaKnown RBP16.42■□□□□ 0.22
CAPN9-201ENST00000271971 DUSP27Q5VZP5 1158 aa16.42■□□□□ 0.22
CAPN9-201ENST00000271971 PHACTR3Q96KR7 559 aa16.42■□□□□ 0.22
CAPN9-201ENST00000271971 SLFN5Q08AF3 891 aa16.41■□□□□ 0.22
CAPN9-201ENST00000271971 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
CAPN9-201ENST00000271971 PHF23Q9BUL5 403 aaPredicted RBP16.41■□□□□ 0.22
CAPN9-201ENST00000271971 PHRF1Q9P1Y6 1649 aaKnown RBP16.4■□□□□ 0.22
CAPN9-201ENST00000271971 USP19O94966 1318 aa16.4■□□□□ 0.22
CAPN9-201ENST00000271971 SULT6B1Q6IMI4 303 aa16.4■□□□□ 0.22
CAPN9-201ENST00000271971 TNS3Q68CZ2 1445 aa16.4■□□□□ 0.22
CAPN9-201ENST00000271971 LTBP4Q8N2S1 1624 aa16.4■□□□□ 0.22
CAPN9-201ENST00000271971 GCP02774 474 aa16.4■□□□□ 0.22
CAPN9-201ENST00000271971 KCNH5Q8NCM2 988 aa16.39■□□□□ 0.21
CAPN9-201ENST00000271971 LTV1Q96GA3 475 aaPredicted RBP16.39■□□□□ 0.21
CAPN9-201ENST00000271971 PNNQ9H307 717 aaKnown RBP16.39■□□□□ 0.21
CAPN9-201ENST00000271971 RGPD2P0DJD1 1756 aa16.39■□□□□ 0.21
CAPN9-201ENST00000271971 CRYBG1Q9Y4K1 1723 aa16.38■□□□□ 0.21
CAPN9-201ENST00000271971 RTL1A6NKG5 1358 aa16.38■□□□□ 0.21
CAPN9-201ENST00000271971 KIF24Q5T7B8 1368 aa16.38■□□□□ 0.21
CAPN9-201ENST00000271971 RGPD5Q99666 1765 aa16.38■□□□□ 0.21
CAPN9-201ENST00000271971 FANCIQ9NVI1 1328 aa16.38■□□□□ 0.21
CAPN9-201ENST00000271971 RIPK4P57078 832 aa16.38■□□□□ 0.21
CAPN9-201ENST00000271971 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
CAPN9-201ENST00000271971 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
CAPN9-201ENST00000271971 TRIM35Q9UPQ4 493 aa16.38■□□□□ 0.21
CAPN9-201ENST00000271971 E9PSI1 815 aa16.37■□□□□ 0.21
CAPN9-201ENST00000271971 ARHGEF10O15013 1369 aa16.37■□□□□ 0.21
CAPN9-201ENST00000271971 NHSL1Q5SYE7 1610 aa16.36■□□□□ 0.21
CAPN9-201ENST00000271971 NEFMP07197 916 aa16.36■□□□□ 0.21
CAPN9-201ENST00000271971 TRMT2AQ8IZ69 625 aaKnown RBP16.36■□□□□ 0.21
CAPN9-201ENST00000271971 CABLES1Q8TDN4 633 aa16.36■□□□□ 0.21
CAPN9-201ENST00000271971 EYA1Q99502 592 aa16.36■□□□□ 0.21
CAPN9-201ENST00000271971 SPATA31A3Q5VYP0 1347 aa16.36■□□□□ 0.21
CAPN9-201ENST00000271971 IP6K1Q92551 441 aa16.35■□□□□ 0.21
CAPN9-201ENST00000271971 IGSF1Q8N6C5 1336 aa16.35■□□□□ 0.21
CAPN9-201ENST00000271971 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
CAPN9-201ENST00000271971 ARHGEF25Q86VW2 580 aa16.35■□□□□ 0.21
CAPN9-201ENST00000271971 ZC3H6P61129 1189 aaKnown RBP16.34■□□□□ 0.21
CAPN9-201ENST00000271971 WDR63Q8IWG1 891 aa16.34■□□□□ 0.21
CAPN9-201ENST00000271971 RNF123Q5XPI4 1314 aa16.33■□□□□ 0.21
CAPN9-201ENST00000271971 ROBO1Q9Y6N7 1651 aa16.33■□□□□ 0.21
CAPN9-201ENST00000271971 USHBP1Q8N6Y0 703 aa16.33■□□□□ 0.2
CAPN9-201ENST00000271971 KDRP35968 1356 aa16.33■□□□□ 0.2
CAPN9-201ENST00000271971 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
CAPN9-201ENST00000271971 SOS2Q07890 1332 aaPredicted RBP16.32■□□□□ 0.2
CAPN9-201ENST00000271971 THUMPD2Q9BTF0 503 aaKnown RBP16.32■□□□□ 0.2
CAPN9-201ENST00000271971 ERICH6BQ5W0A0 696 aa16.31■□□□□ 0.2
CAPN9-201ENST00000271971 ABCA3Q99758 1704 aa16.31■□□□□ 0.2
CAPN9-201ENST00000271971 RRP1P56182 461 aaKnown RBP16.3■□□□□ 0.2
CAPN9-201ENST00000271971 TSR2Q969E8 191 aaKnown RBP16.3■□□□□ 0.2
CAPN9-201ENST00000271971 AXIN2Q9Y2T1 843 aa16.3■□□□□ 0.2
CAPN9-201ENST00000271971 FAM83GA6ND36 823 aa16.3■□□□□ 0.2
CAPN9-201ENST00000271971 LRRC59Q96AG4 307 aaKnown RBP16.3■□□□□ 0.2
CAPN9-201ENST00000271971 COL18A1P39060 1754 aa16.3■□□□□ 0.2
CAPN9-201ENST00000271971 DCTN1Q14203 1278 aa16.28■□□□□ 0.2
CAPN9-201ENST00000271971 NBPF6Q5VWK0 638 aa16.28■□□□□ 0.2
CAPN9-201ENST00000271971 NBPF4Q96M43 638 aa16.28■□□□□ 0.2
CAPN9-201ENST00000271971 PLIN1O60240 522 aa16.28■□□□□ 0.2
CAPN9-201ENST00000271971 CHRNA2Q15822 529 aa16.27■□□□□ 0.2
CAPN9-201ENST00000271971 ANKRD24Q8TF21 1146 aa16.27■□□□□ 0.2
CAPN9-201ENST00000271971 MYH16Q9H6N6 1097 aa16.27■□□□□ 0.19
CAPN9-201ENST00000271971 KIAA0232Q92628 1395 aa16.26■□□□□ 0.19
CAPN9-201ENST00000271971 MTHFSDQ2M296 383 aaKnown RBP16.26■□□□□ 0.19
CAPN9-201ENST00000271971 CAMTA1Q9Y6Y1 1673 aa16.26■□□□□ 0.19
CAPN9-201ENST00000271971 LAS1LQ9Y4W2 734 aaKnown RBP16.26■□□□□ 0.19
CAPN9-201ENST00000271971 IL16Q14005 1332 aa16.25■□□□□ 0.19
CAPN9-201ENST00000271971 PRKCSHP14314 528 aaPredicted RBP16.24■□□□□ 0.19
CAPN9-201ENST00000271971 ERBB3P21860 1342 aa16.24■□□□□ 0.19
CAPN9-201ENST00000271971 MCM10Q7L590 875 aa16.24■□□□□ 0.19
CAPN9-201ENST00000271971 BCAR3O75815 825 aa16.23■□□□□ 0.19
CAPN9-201ENST00000271971 LMOD3Q0VAK6 560 aa16.23■□□□□ 0.19
CAPN9-201ENST00000271971 AHDC1Q5TGY3 1603 aaPredicted RBP16.23■□□□□ 0.19
CAPN9-201ENST00000271971 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
CAPN9-201ENST00000271971 LMO7Q8WWI1 1683 aa16.22■□□□□ 0.19
CAPN9-201ENST00000271971 CPDO75976 1380 aa16.22■□□□□ 0.19
CAPN9-201ENST00000271971 HAP1P54257 671 aaPredicted RBP16.22■□□□□ 0.19
CAPN9-201ENST00000271971 NCAPD2Q15021 1401 aa16.21■□□□□ 0.19
CAPN9-201ENST00000271971 FAM208AQ9UK61 1670 aaKnown RBP16.21■□□□□ 0.18
CAPN9-201ENST00000271971 ABCC6O95255 1503 aa16.2■□□□□ 0.18
CAPN9-201ENST00000271971 C20orf194Q5TEA3 1177 aa16.2■□□□□ 0.18
CAPN9-201ENST00000271971 AEBP2Q6ZN18 517 aaPredicted RBP16.2■□□□□ 0.18
CAPN9-201ENST00000271971 GAS2L2Q8NHY3 880 aa16.2■□□□□ 0.18
CAPN9-201ENST00000271971 BCL2L13Q9BXK5 485 aa16.2■□□□□ 0.18
CAPN9-201ENST00000271971 PHLPP1O60346 1717 aa16.2■□□□□ 0.18
CAPN9-201ENST00000271971 PRDM11Q9NQV5 511 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms