RNA–Protein interactions for RNA: ENST00000269468.9

MBD1-201, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene MBD1, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-201ENST00000269468 DEPDC5O75140 1603 aa17.76■□□□□ 0.43
MBD1-201ENST00000269468 PLEKHM2Q8IWE5 1019 aa17.76■□□□□ 0.43
MBD1-201ENST00000269468 OTUD7AQ8TE49 926 aaPredicted RBP17.76■□□□□ 0.43
MBD1-201ENST00000269468 MPNDQ8N594 471 aa17.76■□□□□ 0.43
MBD1-201ENST00000269468 GPT2Q8TD30 523 aa17.76■□□□□ 0.43
MBD1-201ENST00000269468 NOL7Q9UMY1 257 aaKnown RBP17.76■□□□□ 0.43
MBD1-201ENST00000269468 CLEC17AQ6ZS10 378 aa17.75■□□□□ 0.43
MBD1-201ENST00000269468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.75■□□□□ 0.43
MBD1-201ENST00000269468 PHACTR3Q96KR7 559 aa17.75■□□□□ 0.43
MBD1-201ENST00000269468 CHMP4BQ9H444 224 aaKnown RBP17.75■□□□□ 0.43
MBD1-201ENST00000269468 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.75■□□□□ 0.43
MBD1-201ENST00000269468 IBTKQ9P2D0 1353 aaPredicted RBP17.75■□□□□ 0.43
MBD1-201ENST00000269468 FOXD4L6Q3SYB3 417 aaPredicted RBP17.74■□□□□ 0.43
MBD1-201ENST00000269468 FOXD4L3Q6VB84 417 aaPredicted RBP17.74■□□□□ 0.43
MBD1-201ENST00000269468 NRXN1Q9ULB1 1477 aa17.74■□□□□ 0.43
MBD1-201ENST00000269468 TPRNQ4KMQ1 711 aa17.74■□□□□ 0.43
MBD1-201ENST00000269468 NSFL1CQ9UNZ2 370 aaKnown RBP17.74■□□□□ 0.43
MBD1-201ENST00000269468 USP26Q9BXU7 913 aa17.74■□□□□ 0.43
MBD1-201ENST00000269468 ZCCHC11Q5TAX3 1644 aaKnown RBP17.74■□□□□ 0.43
MBD1-201ENST00000269468 SMARCA5O60264 1052 aaPredicted RBP17.73■□□□□ 0.43
MBD1-201ENST00000269468 NOL8Q76FK4 1167 aaKnown RBP17.73■□□□□ 0.43
MBD1-201ENST00000269468 PTMAP06454 111 aaKnown RBP17.72■□□□□ 0.43
MBD1-201ENST00000269468 TMEM63CQ9P1W3 806 aa17.72■□□□□ 0.43
MBD1-201ENST00000269468 FANCAO15360 1455 aa17.72■□□□□ 0.43
MBD1-201ENST00000269468 VWDEQ8N2E2 1590 aa17.72■□□□□ 0.43
MBD1-201ENST00000269468 ST18O60284 1047 aa17.72■□□□□ 0.43
MBD1-201ENST00000269468 TWISTNBQ3B726 338 aaPredicted RBP17.72■□□□□ 0.43
MBD1-201ENST00000269468 TTC22Q5TAA0 569 aa17.72■□□□□ 0.43
MBD1-201ENST00000269468 TERF2IPQ9NYB0 399 aa17.72■□□□□ 0.43
MBD1-201ENST00000269468 TULP4Q9NRJ4 1543 aa17.72■□□□□ 0.43
MBD1-201ENST00000269468 IFT172Q9UG01 1749 aa17.71■□□□□ 0.43
MBD1-201ENST00000269468 INTS3Q68E01 1043 aaKnown RBP17.71■□□□□ 0.43
MBD1-201ENST00000269468 ZKSCAN5Q9Y2L8 839 aa17.71■□□□□ 0.43
MBD1-201ENST00000269468 FCHSD2O94868 740 aa17.71■□□□□ 0.42
MBD1-201ENST00000269468 MBIPQ9NS73 344 aa17.71■□□□□ 0.42
MBD1-201ENST00000269468 ADGRB1O14514 1584 aa17.71■□□□□ 0.42
MBD1-201ENST00000269468 SETBP1Q9Y6X0 1596 aa17.71■□□□□ 0.42
MBD1-201ENST00000269468 EFCAB6Q5THR3 1501 aa17.7■□□□□ 0.42
MBD1-201ENST00000269468 CYP2E1P05181 493 aaPredicted RBP17.7■□□□□ 0.42
MBD1-201ENST00000269468 C8orf58Q8NAV2 365 aa17.7■□□□□ 0.42
MBD1-201ENST00000269468 ZDHHC9Q9Y397 364 aa17.7■□□□□ 0.42
MBD1-201ENST00000269468 ZNF500O60304 480 aaPredicted RBP17.7■□□□□ 0.42
MBD1-201ENST00000269468 PDLIM2Q96JY6 352 aa17.7■□□□□ 0.42
MBD1-201ENST00000269468 USP32Q8NFA0 1604 aa17.7■□□□□ 0.42
MBD1-201ENST00000269468 CHD1O14646 1710 aa17.69■□□□□ 0.42
MBD1-201ENST00000269468 ZC3H13Q5T200 1668 aaKnown RBP17.69■□□□□ 0.42
MBD1-201ENST00000269468 SDSP20132 328 aa17.69■□□□□ 0.42
MBD1-201ENST00000269468 HS1BP3Q53T59 392 aa17.69■□□□□ 0.42
MBD1-201ENST00000269468 DNTTIP2Q5QJE6 756 aaKnown RBP17.69■□□□□ 0.42
MBD1-201ENST00000269468 PPRC1Q5VV67 1664 aaKnown RBP17.69■□□□□ 0.42
MBD1-201ENST00000269468 MED14O60244 1454 aa17.68■□□□□ 0.42
MBD1-201ENST00000269468 PRDM10Q9NQV6 1147 aa17.68■□□□□ 0.42
MBD1-201ENST00000269468 COL3A1P02461 1466 aaPredicted RBP17.68■□□□□ 0.42
MBD1-201ENST00000269468 MROH1Q8NDA8 1641 aa17.68■□□□□ 0.42
MBD1-201ENST00000269468 FAM83GA6ND36 823 aa17.68■□□□□ 0.42
MBD1-201ENST00000269468 VGFO15240 615 aaPredicted RBP17.68■□□□□ 0.42
MBD1-201ENST00000269468 DCTN1Q14203 1278 aa17.68■□□□□ 0.42
MBD1-201ENST00000269468 CASC1Q6TDU7 716 aa17.68■□□□□ 0.42
MBD1-201ENST00000269468 LRSAM1Q6UWE0 723 aa17.68■□□□□ 0.42
MBD1-201ENST00000269468 ARHGAP45Q92619 1136 aa17.68■□□□□ 0.42
MBD1-201ENST00000269468 GNAI1P63096 354 aa17.67■□□□□ 0.42
MBD1-201ENST00000269468 NFE2L2Q16236 605 aa17.67■□□□□ 0.42
MBD1-201ENST00000269468 CWC22Q9HCG8 908 aaKnown RBP17.67■□□□□ 0.42
MBD1-201ENST00000269468 ADGRB3O60242 1522 aa17.67■□□□□ 0.42
MBD1-201ENST00000269468 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
MBD1-201ENST00000269468 NEURL4Q96JN8 1562 aa17.67■□□□□ 0.42
MBD1-201ENST00000269468 ABCC4O15439 1325 aa17.67■□□□□ 0.42
MBD1-201ENST00000269468 TERF1P54274 439 aa17.67■□□□□ 0.42
MBD1-201ENST00000269468 HDGFL2Q7Z4V5 671 aaPredicted RBP17.67■□□□□ 0.42
MBD1-201ENST00000269468 PRAM1Q96QH2 718 aa17.67■□□□□ 0.42
MBD1-201ENST00000269468 CABP1Q9NZU7 370 aa17.67■□□□□ 0.42
MBD1-201ENST00000269468 DCTPP1Q9H773 170 aa17.66■□□□□ 0.42
MBD1-201ENST00000269468 API5Q9BZZ5 524 aaKnown RBP17.66■□□□□ 0.42
MBD1-201ENST00000269468 CCDC39Q9UFE4 941 aa17.66■□□□□ 0.42
MBD1-201ENST00000269468 NEK4P51957 841 aa17.66■□□□□ 0.42
MBD1-201ENST00000269468 JARID2Q92833 1246 aaPredicted RBP17.66■□□□□ 0.42
MBD1-201ENST00000269468 NPATQ14207 1427 aa17.65■□□□□ 0.42
MBD1-201ENST00000269468 CSPP1Q1MSJ5 1256 aa17.65■□□□□ 0.42
MBD1-201ENST00000269468 MAP7D2Q96T17 732 aa17.65■□□□□ 0.42
MBD1-201ENST00000269468 BRPF1P55201 1214 aaPredicted RBP17.65■□□□□ 0.42
MBD1-201ENST00000269468 PUS7Q96PZ0 661 aaKnown RBP17.64■□□□□ 0.42
MBD1-201ENST00000269468 GLI2P10070 1586 aa17.64■□□□□ 0.41
MBD1-201ENST00000269468 INO80Q9ULG1 1556 aaPredicted RBP17.64■□□□□ 0.41
MBD1-201ENST00000269468 GDPD2Q9HCC8 539 aa17.64■□□□□ 0.41
MBD1-201ENST00000269468 POLKQ9UBT6 870 aa17.64■□□□□ 0.41
MBD1-201ENST00000269468 PTCH1Q13635 1447 aa17.63■□□□□ 0.41
MBD1-201ENST00000269468 KRT24Q2M2I5 525 aa17.63■□□□□ 0.41
MBD1-201ENST00000269468 TSC1Q92574 1164 aa17.63■□□□□ 0.41
MBD1-201ENST00000269468 ZNF830Q96NB3 372 aaPredicted RBP17.63■□□□□ 0.41
MBD1-201ENST00000269468 EMILIN1Q9Y6C2 1016 aa17.63■□□□□ 0.41
MBD1-201ENST00000269468 RPGRIP1LQ68CZ1 1315 aa17.63■□□□□ 0.41
MBD1-201ENST00000269468 LRRC7Q96NW7 1537 aa17.63■□□□□ 0.41
MBD1-201ENST00000269468 IFT57Q9NWB7 429 aa17.62■□□□□ 0.41
MBD1-201ENST00000269468 TSHZ3Q63HK5 1081 aa17.62■□□□□ 0.41
MBD1-201ENST00000269468 SASS6Q6UVJ0 657 aa17.62■□□□□ 0.41
MBD1-201ENST00000269468 REC8O95072 547 aa17.62■□□□□ 0.41
MBD1-201ENST00000269468 PPLO60437 1756 aa17.62■□□□□ 0.41
MBD1-201ENST00000269468 CFAP44Q96MT7 982 aa17.61■□□□□ 0.41
MBD1-201ENST00000269468 PIK3R4Q99570 1358 aa17.61■□□□□ 0.41
MBD1-201ENST00000269468 DYNC1I1O14576 645 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms