RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 SMARCE1Q969G3 411 aa12.16□□□□□ -0.46
LAMA3-201ENST00000269217 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
LAMA3-201ENST00000269217 TTC39AQ5SRH9 613 aa12.16□□□□□ -0.46
LAMA3-201ENST00000269217 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.16□□□□□ -0.46
LAMA3-201ENST00000269217 ANO8Q9HCE9 1232 aaPredicted RBP12.16□□□□□ -0.46
LAMA3-201ENST00000269217 PIP4K2AP48426 406 aaPredicted RBP12.15□□□□□ -0.46
LAMA3-201ENST00000269217 SLC3A2P08195 630 aaKnown RBP12.15□□□□□ -0.46
LAMA3-201ENST00000269217 MCM4P33991 863 aa12.15□□□□□ -0.46
LAMA3-201ENST00000269217 TXLNAP40222 546 aa12.15□□□□□ -0.46
LAMA3-201ENST00000269217 NOM1Q5C9Z4 860 aaKnown RBP12.15□□□□□ -0.46
LAMA3-201ENST00000269217 NSD3Q9BZ95 1437 aa12.15□□□□□ -0.46
LAMA3-201ENST00000269217 EPRSP07814 1512 aaKnown RBP12.15□□□□□ -0.46
LAMA3-201ENST00000269217 CAGE1Q8TC20 777 aa12.15□□□□□ -0.47
LAMA3-201ENST00000269217 FMNL2Q96PY5 1086 aa12.15□□□□□ -0.47
LAMA3-201ENST00000269217 TNMDQ9H2S6 317 aa12.14□□□□□ -0.47
LAMA3-201ENST00000269217 NFE2L2Q16236 605 aa12.14□□□□□ -0.47
LAMA3-201ENST00000269217 CT47A1Q5JQC4 288 aaPredicted RBP12.14□□□□□ -0.47
LAMA3-201ENST00000269217 ZNF530Q6P9A1 599 aaPredicted RBP12.14□□□□□ -0.47
LAMA3-201ENST00000269217 ZSCAN31Q96LW9 406 aaPredicted RBP12.14□□□□□ -0.47
LAMA3-201ENST00000269217 ATP2B1P20020 1258 aa12.14□□□□□ -0.47
LAMA3-201ENST00000269217 TMPOP42166 694 aaKnown RBP12.14□□□□□ -0.47
LAMA3-201ENST00000269217 CEBPZQ03701 1054 aaKnown RBP12.13□□□□□ -0.47
LAMA3-201ENST00000269217 CNNM1Q9NRU3 951 aa12.13□□□□□ -0.47
LAMA3-201ENST00000269217 NESP48681 1621 aa12.13□□□□□ -0.47
LAMA3-201ENST00000269217 CCDC141Q6ZP82 1450 aa12.13□□□□□ -0.47
LAMA3-201ENST00000269217 KDM4AO75164 1064 aa12.13□□□□□ -0.47
LAMA3-201ENST00000269217 LARP1BQ659C4 914 aaKnown RBP12.13□□□□□ -0.47
LAMA3-201ENST00000269217 DNMBPQ6XZF7 1577 aa12.13□□□□□ -0.47
LAMA3-201ENST00000269217 SNAPC4Q5SXM2 1469 aa12.13□□□□□ -0.47
LAMA3-201ENST00000269217 PDIA4P13667 645 aaKnown RBP12.13□□□□□ -0.47
LAMA3-201ENST00000269217 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
LAMA3-201ENST00000269217 BLOC1S2Q6QNY1 142 aa12.13□□□□□ -0.47
LAMA3-201ENST00000269217 RRP12Q5JTH9 1297 aaKnown RBP12.12□□□□□ -0.47
LAMA3-201ENST00000269217 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
LAMA3-201ENST00000269217 SPC24Q8NBT2 197 aa12.12□□□□□ -0.47
LAMA3-201ENST00000269217 CDK13Q14004 1512 aaKnown RBP12.12□□□□□ -0.47
LAMA3-201ENST00000269217 SRGAP3O43295 1099 aa12.12□□□□□ -0.47
LAMA3-201ENST00000269217 STK3Q13188 491 aa12.12□□□□□ -0.47
LAMA3-201ENST00000269217 THEMISQ8N1K5 641 aaPredicted RBP12.12□□□□□ -0.47
LAMA3-201ENST00000269217 PATL2C9JE40 543 aaKnown RBP12.12□□□□□ -0.47
LAMA3-201ENST00000269217 TRIM22Q8IYM9 498 aa12.12□□□□□ -0.47
LAMA3-201ENST00000269217 SIL1Q9H173 461 aa12.12□□□□□ -0.47
LAMA3-201ENST00000269217 GNL3LQ9NVN8 582 aaKnown RBP12.12□□□□□ -0.47
LAMA3-201ENST00000269217 DACH1Q9UI36 760 aa12.12□□□□□ -0.47
LAMA3-201ENST00000269217 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
LAMA3-201ENST00000269217 PCF11O94913 1555 aaKnown RBP12.11□□□□□ -0.47
LAMA3-201ENST00000269217 ME1P48163 572 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
LAMA3-201ENST00000269217 PDRG1Q9NUG6 133 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 CWC15Q9P013 229 aaKnown RBP12.11□□□□□ -0.47
LAMA3-201ENST00000269217 AACSQ86V21 672 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 IL27Q8NEV9 243 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 NACAP1Q9BZK3 213 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 SPG7Q9UQ90 795 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 MTMR7Q9Y216 660 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 MAP4K4O95819 1239 aaPredicted RBP12.11□□□□□ -0.47
LAMA3-201ENST00000269217 CABP4P57796 275 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 KRT32Q14532 448 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 TTLL5Q6EMB2 1281 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 ZSCAN25Q6NSZ9 544 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 PROSER2Q86WR7 435 aaPredicted RBP12.11□□□□□ -0.47
LAMA3-201ENST00000269217 CDK5RAP3Q96JB5 506 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 SERPINC1P01008 464 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 MEX3CQ5U5Q3 659 aaKnown RBP12.11□□□□□ -0.47
LAMA3-201ENST00000269217 PPP6R1Q9UPN7 881 aa12.11□□□□□ -0.47
LAMA3-201ENST00000269217 ABCC11Q96J66 1382 aa12.1□□□□□ -0.47
LAMA3-201ENST00000269217 ODF2Q5BJF6 829 aa12.1□□□□□ -0.47
LAMA3-201ENST00000269217 MYO6Q9UM54 1294 aa12.1□□□□□ -0.47
LAMA3-201ENST00000269217 PTPN23Q9H3S7 1636 aa12.1□□□□□ -0.47
LAMA3-201ENST00000269217 NKTRP30414 1462 aaKnown RBP12.1□□□□□ -0.47
LAMA3-201ENST00000269217 KIAA0586Q9BVV6 1533 aa12.1□□□□□ -0.47
LAMA3-201ENST00000269217 RRS1Q15050 365 aaKnown RBP12.1□□□□□ -0.47
LAMA3-201ENST00000269217 JAKMIP1Q96N16 626 aaKnown RBP12.1□□□□□ -0.47
LAMA3-201ENST00000269217 CFAP45Q9UL16 551 aa12.1□□□□□ -0.47
LAMA3-201ENST00000269217 FAM177BA6PVY3 158 aa12.09□□□□□ -0.47
LAMA3-201ENST00000269217 MAP3K1Q13233 1512 aa12.09□□□□□ -0.47
LAMA3-201ENST00000269217 ALDH1L2Q3SY69 923 aa12.09□□□□□ -0.47
LAMA3-201ENST00000269217 SPATA32Q96LK8 384 aa12.09□□□□□ -0.47
LAMA3-201ENST00000269217 CCDC66A2RUB6 948 aa12.09□□□□□ -0.47
LAMA3-201ENST00000269217 CTNNA3Q9UI47 895 aa12.09□□□□□ -0.47
LAMA3-201ENST00000269217 BRPF1P55201 1214 aaPredicted RBP12.09□□□□□ -0.47
LAMA3-201ENST00000269217 CCDC69A6NI79 296 aa12.08□□□□□ -0.48
LAMA3-201ENST00000269217 CDKL5O76039 1030 aa12.08□□□□□ -0.48
LAMA3-201ENST00000269217 IKQ13123 557 aaPredicted RBP12.08□□□□□ -0.48
LAMA3-201ENST00000269217 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
LAMA3-201ENST00000269217 CWC27Q6UX04 472 aaKnown RBP12.08□□□□□ -0.48
LAMA3-201ENST00000269217 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
LAMA3-201ENST00000269217 ZNHIT6Q9NWK9 470 aaKnown RBP12.08□□□□□ -0.48
LAMA3-201ENST00000269217 CBFA2T2O43439 604 aa12.08□□□□□ -0.48
LAMA3-201ENST00000269217 RARSP54136 660 aaKnown RBP12.08□□□□□ -0.48
LAMA3-201ENST00000269217 CCDC57Q2TAC2 916 aa12.08□□□□□ -0.48
LAMA3-201ENST00000269217 CCDC112Q8NEF3 446 aa12.08□□□□□ -0.48
LAMA3-201ENST00000269217 CCAR1Q8IX12 1150 aaKnown RBP12.08□□□□□ -0.48
LAMA3-201ENST00000269217 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.48
LAMA3-201ENST00000269217 BTBD11A6QL63 1104 aa12.08□□□□□ -0.48
LAMA3-201ENST00000269217 PPFIBP1Q86W92 1011 aa12.08□□□□□ -0.48
LAMA3-201ENST00000269217 IL1RAPL2Q9NP60 686 aa12.08□□□□□ -0.48
LAMA3-201ENST00000269217 IQGAP2Q13576 1575 aa12.07□□□□□ -0.48
LAMA3-201ENST00000269217 ESPNB1AK53 854 aa12.07□□□□□ -0.48
LAMA3-201ENST00000269217 DCTN1Q14203 1278 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms