RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 GAS2L3Q86XJ1 694 aa21.31■■□□□ 1
SPG7-201ENST00000268704 POLKQ9UBT6 870 aa21.31■■□□□ 1
SPG7-201ENST00000268704 MRPL50Q8N5N7 158 aaKnown RBP21.31■■□□□ 1
SPG7-201ENST00000268704 FAM135BQ49AJ0 1406 aa21.31■■□□□ 1
SPG7-201ENST00000268704 KIF20BQ96Q89 1820 aa21.3■■□□□ 1
SPG7-201ENST00000268704 NAP1L5Q96NT1 182 aaPredicted RBP21.29■■□□□ 1
SPG7-201ENST00000268704 EMILIN1Q9Y6C2 1016 aa21.29■■□□□ 1
SPG7-201ENST00000268704 PNNQ9H307 717 aaKnown RBP21.28■■□□□ 1
SPG7-201ENST00000268704 RAB3GAP1Q15042 981 aa21.28■■□□□ 1
SPG7-201ENST00000268704 FBXO31Q5XUX0 539 aaPredicted RBP21.27■■□□□ 1
SPG7-201ENST00000268704 MBIPQ9NS73 344 aa21.27■■□□□ 1
SPG7-201ENST00000268704 DIP2CQ9Y2E4 1556 aa21.27■■□□□ 1
SPG7-201ENST00000268704 ERBB4Q15303 1308 aa21.27■■□□□ 1
SPG7-201ENST00000268704 AK9Q5TCS8 1911 aa21.27■■□□□ 1
SPG7-201ENST00000268704 NFE2L2Q16236 605 aa21.27■□□□□ 0.99
SPG7-201ENST00000268704 WAPLQ7Z5K2 1190 aa21.27■□□□□ 0.99
SPG7-201ENST00000268704 CLTCQ00610 1675 aaKnown RBP21.27■□□□□ 0.99
SPG7-201ENST00000268704 GCC1Q96CN9 775 aa21.26■□□□□ 0.99
SPG7-201ENST00000268704 GAS2L2Q8NHY3 880 aa21.26■□□□□ 0.99
SPG7-201ENST00000268704 ZRANB1Q9UGI0 708 aa21.26■□□□□ 0.99
SPG7-201ENST00000268704 MAP2P11137 1827 aaKnown RBP21.26■□□□□ 0.99
SPG7-201ENST00000268704 FAM83GA6ND36 823 aa21.25■□□□□ 0.99
SPG7-201ENST00000268704 SSFA2P28290 1259 aa21.25■□□□□ 0.99
SPG7-201ENST00000268704 ZFYVE9O95405 1425 aa21.25■□□□□ 0.99
SPG7-201ENST00000268704 TSPOAP1O95153 1857 aa21.25■□□□□ 0.99
SPG7-201ENST00000268704 CLCN1P35523 988 aa21.25■□□□□ 0.99
SPG7-201ENST00000268704 TMEM131LA2VDJ0 1609 aa21.25■□□□□ 0.99
SPG7-201ENST00000268704 K7ELQ4 463 aaPredicted RBP21.25■□□□□ 0.99
SPG7-201ENST00000268704 C8orf58Q8NAV2 365 aa21.25■□□□□ 0.99
SPG7-201ENST00000268704 GBP4Q96PP9 640 aa21.25■□□□□ 0.99
SPG7-201ENST00000268704 ZMYND15Q9H091 742 aa21.25■□□□□ 0.99
SPG7-201ENST00000268704 SLC52A1Q9NWF4 448 aa21.25■□□□□ 0.99
SPG7-201ENST00000268704 PTCH1Q13635 1447 aa21.24■□□□□ 0.99
SPG7-201ENST00000268704 ARHGEF40Q8TER5 1519 aa21.24■□□□□ 0.99
SPG7-201ENST00000268704 DCTN1Q14203 1278 aa21.24■□□□□ 0.99
SPG7-201ENST00000268704 YEATS2Q9ULM3 1422 aa21.24■□□□□ 0.99
SPG7-201ENST00000268704 CDC42BPGQ6DT37 1551 aa21.23■□□□□ 0.99
SPG7-201ENST00000268704 GSPT1P15170 499 aaKnown RBP21.23■□□□□ 0.99
SPG7-201ENST00000268704 BRPF1P55201 1214 aaPredicted RBP21.23■□□□□ 0.99
SPG7-201ENST00000268704 TWISTNBQ3B726 338 aaPredicted RBP21.23■□□□□ 0.99
SPG7-201ENST00000268704 CIZ1Q9ULV3 898 aaPredicted RBP21.23■□□□□ 0.99
SPG7-201ENST00000268704 ABCC4O15439 1325 aa21.22■□□□□ 0.99
SPG7-201ENST00000268704 ARHGAP31Q2M1Z3 1444 aa21.21■□□□□ 0.99
SPG7-201ENST00000268704 NME9Q86XW9 330 aa21.21■□□□□ 0.99
SPG7-201ENST00000268704 PIK3R4Q99570 1358 aa21.21■□□□□ 0.99
SPG7-201ENST00000268704 PREX1Q8TCU6 1659 aa21.21■□□□□ 0.99
SPG7-201ENST00000268704 ALKQ9UM73 1620 aa21.2■□□□□ 0.99
SPG7-201ENST00000268704 C16orf71Q8IYS4 520 aaPredicted RBP21.2■□□□□ 0.99
SPG7-201ENST00000268704 KNDC1Q76NI1 1749 aa21.2■□□□□ 0.98
SPG7-201ENST00000268704 GNAI1P63096 354 aa21.2■□□□□ 0.98
SPG7-201ENST00000268704 ARHGAP45Q92619 1136 aa21.2■□□□□ 0.98
SPG7-201ENST00000268704 ZNF428Q96B54 188 aa21.2■□□□□ 0.98
SPG7-201ENST00000268704 IFT57Q9NWB7 429 aa21.19■□□□□ 0.98
SPG7-201ENST00000268704 RRS1Q15050 365 aaKnown RBP21.19■□□□□ 0.98
SPG7-201ENST00000268704 DLG5Q8TDM6 1919 aa21.18■□□□□ 0.98
SPG7-201ENST00000268704 ESPNB1AK53 854 aa21.18■□□□□ 0.98
SPG7-201ENST00000268704 CDC45O75419 566 aa21.18■□□□□ 0.98
SPG7-201ENST00000268704 IL13P35225 146 aa21.18■□□□□ 0.98
SPG7-201ENST00000268704 STAG3Q9UJ98 1225 aa21.18■□□□□ 0.98
SPG7-201ENST00000268704 NCKAP5LQ9HCH0 1330 aa21.18■□□□□ 0.98
SPG7-201ENST00000268704 OTUD7AQ8TE49 926 aaPredicted RBP21.18■□□□□ 0.98
SPG7-201ENST00000268704 APBB1O00213 710 aa21.18■□□□□ 0.98
SPG7-201ENST00000268704 ZNF853P0CG23 659 aa21.18■□□□□ 0.98
SPG7-201ENST00000268704 KRT24Q2M2I5 525 aa21.18■□□□□ 0.98
SPG7-201ENST00000268704 PLEKHM2Q8IWE5 1019 aa21.17■□□□□ 0.98
SPG7-201ENST00000268704 TRIM44Q96DX7 344 aaPredicted RBP21.15■□□□□ 0.98
SPG7-201ENST00000268704 CALD1Q05682 793 aaKnown RBP21.14■□□□□ 0.98
SPG7-201ENST00000268704 CHMP4BQ9H444 224 aaKnown RBP21.14■□□□□ 0.98
SPG7-201ENST00000268704 PKP1Q13835 747 aa21.14■□□□□ 0.97
SPG7-201ENST00000268704 CFAP44Q96MT7 982 aa21.14■□□□□ 0.97
SPG7-201ENST00000268704 SKOR2Q2VWA4 1001 aaPredicted RBP21.13■□□□□ 0.97
SPG7-201ENST00000268704 ISY1Q9ULR0 285 aaKnown RBP21.13■□□□□ 0.97
SPG7-201ENST00000268704 RIMS2Q9UQ26 1411 aa21.13■□□□□ 0.97
SPG7-201ENST00000268704 SMARCA5O60264 1052 aaPredicted RBP21.13■□□□□ 0.97
SPG7-201ENST00000268704 BAG4O95429 457 aaKnown RBP21.13■□□□□ 0.97
SPG7-201ENST00000268704 DDX49Q9Y6V7 483 aaKnown RBP21.12■□□□□ 0.97
SPG7-201ENST00000268704 RICTORQ6R327 1708 aa21.12■□□□□ 0.97
SPG7-201ENST00000268704 API5Q9BZZ5 524 aaKnown RBP21.11■□□□□ 0.97
SPG7-201ENST00000268704 TTC22Q5TAA0 569 aa21.11■□□□□ 0.97
SPG7-201ENST00000268704 NEO1Q92859 1461 aa21.11■□□□□ 0.97
SPG7-201ENST00000268704 ATP7BP35670 1465 aa21.1■□□□□ 0.97
SPG7-201ENST00000268704 AEBP1Q8IUX7 1158 aa21.1■□□□□ 0.97
SPG7-201ENST00000268704 DCTPP1Q9H773 170 aa21.1■□□□□ 0.97
SPG7-201ENST00000268704 MCTP1Q6DN14 999 aa21.1■□□□□ 0.97
SPG7-201ENST00000268704 HSP90AA2PQ14568 343 aaPredicted RBP21.08■□□□□ 0.97
SPG7-201ENST00000268704 NCLP19338 710 aaKnown RBP21.08■□□□□ 0.97
SPG7-201ENST00000268704 CHAMP1Q96JM3 812 aa21.08■□□□□ 0.97
SPG7-201ENST00000268704 GOLGA6L22H0YM25 854 aa21.08■□□□□ 0.96
SPG7-201ENST00000268704 NASPP49321 788 aaPredicted RBP21.08■□□□□ 0.96
SPG7-201ENST00000268704 USP26Q9BXU7 913 aa21.08■□□□□ 0.96
SPG7-201ENST00000268704 CDK12Q9NYV4 1490 aaPredicted RBP21.07■□□□□ 0.96
SPG7-201ENST00000268704 ATP10DQ9P241 1426 aa21.07■□□□□ 0.96
SPG7-201ENST00000268704 GLIPR1L2Q4G1C9 344 aa21.07■□□□□ 0.96
SPG7-201ENST00000268704 SDSP20132 328 aa21.06■□□□□ 0.96
SPG7-201ENST00000268704 RABEP1Q15276 862 aa21.06■□□□□ 0.96
SPG7-201ENST00000268704 ZGPATQ8N5A5 531 aaKnown RBP21.06■□□□□ 0.96
SPG7-201ENST00000268704 CPS1P31327 1500 aa21.06■□□□□ 0.96
SPG7-201ENST00000268704 MSH6P52701 1360 aa21.06■□□□□ 0.96
SPG7-201ENST00000268704 KLHL40Q2TBA0 621 aa21.06■□□□□ 0.96
SPG7-201ENST00000268704 MCM10Q7L590 875 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms