RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 LTBP4Q8N2S1 1624 aa15.82■□□□□ 0.12
BEST3-201ENST00000266661 KCNA6P17658 529 aa15.82■□□□□ 0.12
BEST3-201ENST00000266661 FTSJ3Q8IY81 847 aaKnown RBP15.82■□□□□ 0.12
BEST3-201ENST00000266661 POLKQ9UBT6 870 aa15.82■□□□□ 0.12
BEST3-201ENST00000266661 NOB1Q9ULX3 412 aaKnown RBP15.82■□□□□ 0.12
BEST3-201ENST00000266661 XIRP1Q702N8 1843 aaKnown RBP15.82■□□□□ 0.12
BEST3-201ENST00000266661 ALDH1L2Q3SY69 923 aa15.82■□□□□ 0.12
BEST3-201ENST00000266661 AMOTL2Q9Y2J4 779 aa15.82■□□□□ 0.12
BEST3-201ENST00000266661 CPSF1Q10570 1443 aaKnown RBP15.81■□□□□ 0.12
BEST3-201ENST00000266661 BECN1Q14457 450 aa15.81■□□□□ 0.12
BEST3-201ENST00000266661 IL27Q8NEV9 243 aa15.81■□□□□ 0.12
BEST3-201ENST00000266661 TMEM57Q8N5G2 664 aa15.8■□□□□ 0.12
BEST3-201ENST00000266661 DIP2AQ14689 1571 aa15.8■□□□□ 0.12
BEST3-201ENST00000266661 ZNF428Q96B54 188 aa15.79■□□□□ 0.12
BEST3-201ENST00000266661 TBC1D2Q9BYX2 928 aa15.79■□□□□ 0.12
BEST3-201ENST00000266661 KIF16BQ96L93 1317 aa15.79■□□□□ 0.12
BEST3-201ENST00000266661 PIK3R4Q99570 1358 aa15.78■□□□□ 0.12
BEST3-201ENST00000266661 WAPLQ7Z5K2 1190 aa15.78■□□□□ 0.12
BEST3-201ENST00000266661 XRN1Q8IZH2 1706 aaKnown RBP15.77■□□□□ 0.12
BEST3-201ENST00000266661 IPO8O15397 1037 aaKnown RBP15.77■□□□□ 0.11
BEST3-201ENST00000266661 ITPRIPQ8IWB1 547 aa15.77■□□□□ 0.11
BEST3-201ENST00000266661 EDC4Q6P2E9 1401 aaKnown RBP15.76■□□□□ 0.11
BEST3-201ENST00000266661 AATKQ6ZMQ8 1374 aa15.76■□□□□ 0.11
BEST3-201ENST00000266661 ZNF853P0CG23 659 aa15.76■□□□□ 0.11
BEST3-201ENST00000266661 PRKAR2BP31323 418 aa15.76■□□□□ 0.11
BEST3-201ENST00000266661 UPF2Q9HAU5 1272 aaKnown RBP15.76■□□□□ 0.11
BEST3-201ENST00000266661 FBLN1P23142 703 aa15.76■□□□□ 0.11
BEST3-201ENST00000266661 IL13P35225 146 aa15.76■□□□□ 0.11
BEST3-201ENST00000266661 NFE2L2Q16236 605 aa15.76■□□□□ 0.11
BEST3-201ENST00000266661 PROSER2Q86WR7 435 aaPredicted RBP15.76■□□□□ 0.11
BEST3-201ENST00000266661 PHACTR3Q96KR7 559 aa15.76■□□□□ 0.11
BEST3-201ENST00000266661 NWD1Q149M9 1564 aa15.75■□□□□ 0.11
BEST3-201ENST00000266661 CDK12Q9NYV4 1490 aaPredicted RBP15.75■□□□□ 0.11
BEST3-201ENST00000266661 ROBO2Q9HCK4 1378 aa15.75■□□□□ 0.11
BEST3-201ENST00000266661 VAMP4O75379 141 aa15.75■□□□□ 0.11
BEST3-201ENST00000266661 NUCB1Q02818 461 aa15.75■□□□□ 0.11
BEST3-201ENST00000266661 PTCH1Q13635 1447 aa15.75■□□□□ 0.11
BEST3-201ENST00000266661 ARHGAP45Q92619 1136 aa15.74■□□□□ 0.11
BEST3-201ENST00000266661 MRPL50Q8N5N7 158 aaKnown RBP15.74■□□□□ 0.11
BEST3-201ENST00000266661 SIRT1Q96EB6 747 aa15.74■□□□□ 0.11
BEST3-201ENST00000266661 MAP2P11137 1827 aaKnown RBP15.73■□□□□ 0.11
BEST3-201ENST00000266661 TMEM94Q12767 1356 aa15.73■□□□□ 0.11
BEST3-201ENST00000266661 WASLO00401 505 aaPredicted RBP15.73■□□□□ 0.11
BEST3-201ENST00000266661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.73■□□□□ 0.11
BEST3-201ENST00000266661 TECPR2O15040 1411 aa15.73■□□□□ 0.11
BEST3-201ENST00000266661 ZBTB7BO15156 539 aaPredicted RBP15.72■□□□□ 0.11
BEST3-201ENST00000266661 CERKQ8TCT0 537 aa15.71■□□□□ 0.11
BEST3-201ENST00000266661 C22orf23Q9BZE7 217 aa15.71■□□□□ 0.11
BEST3-201ENST00000266661 IFT57Q9NWB7 429 aa15.71■□□□□ 0.11
BEST3-201ENST00000266661 BRPF3Q9ULD4 1205 aa15.71■□□□□ 0.11
BEST3-201ENST00000266661 EMILIN1Q9Y6C2 1016 aa15.71■□□□□ 0.11
BEST3-201ENST00000266661 CPS1P31327 1500 aa15.71■□□□□ 0.11
BEST3-201ENST00000266661 KNDC1Q76NI1 1749 aa15.71■□□□□ 0.11
BEST3-201ENST00000266661 MON2Q7Z3U7 1717 aa15.71■□□□□ 0.1
BEST3-201ENST00000266661 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.7■□□□□ 0.1
BEST3-201ENST00000266661 SLKQ9H2G2 1235 aaPredicted RBP15.7■□□□□ 0.1
BEST3-201ENST00000266661 NALCNQ8IZF0 1738 aa15.7■□□□□ 0.1
BEST3-201ENST00000266661 CALD1Q05682 793 aaKnown RBP15.69■□□□□ 0.1
BEST3-201ENST00000266661 NME9Q86XW9 330 aa15.69■□□□□ 0.1
BEST3-201ENST00000266661 TSPYL6Q8N831 410 aa15.69■□□□□ 0.1
BEST3-201ENST00000266661 ABCC4O15439 1325 aa15.69■□□□□ 0.1
BEST3-201ENST00000266661 GNAI1P63096 354 aa15.69■□□□□ 0.1
BEST3-201ENST00000266661 C14orf37Q86TY3 774 aa15.69■□□□□ 0.1
BEST3-201ENST00000266661 THUMPD2Q9BTF0 503 aaKnown RBP15.69■□□□□ 0.1
BEST3-201ENST00000266661 ZRANB1Q9UGI0 708 aa15.69■□□□□ 0.1
BEST3-201ENST00000266661 HMOX1P09601 288 aa15.68■□□□□ 0.1
BEST3-201ENST00000266661 RBM25P49756 843 aaKnown RBP15.68■□□□□ 0.1
BEST3-201ENST00000266661 CHD1LQ86WJ1 897 aa15.68■□□□□ 0.1
BEST3-201ENST00000266661 AKAP12Q02952 1782 aa15.67■□□□□ 0.1
BEST3-201ENST00000266661 MBIPQ9NS73 344 aa15.67■□□□□ 0.1
BEST3-201ENST00000266661 NCOA3Q9Y6Q9 1424 aa15.67■□□□□ 0.1
BEST3-201ENST00000266661 MFAP1P55081 439 aaKnown RBP15.67■□□□□ 0.1
BEST3-201ENST00000266661 SIRT2Q8IXJ6 389 aa15.67■□□□□ 0.1
BEST3-201ENST00000266661 NUDT16Q96DE0 195 aaKnown RBP15.67■□□□□ 0.1
BEST3-201ENST00000266661 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
BEST3-201ENST00000266661 DDIT3P35638 169 aa15.66■□□□□ 0.1
BEST3-201ENST00000266661 NRKQ7Z2Y5 1582 aa15.66■□□□□ 0.1
BEST3-201ENST00000266661 NUTM2FA1L443 756 aa15.65■□□□□ 0.1
BEST3-201ENST00000266661 BMP2KLQ5H9B9 411 aa15.65■□□□□ 0.1
BEST3-201ENST00000266661 GCC1Q96CN9 775 aa15.65■□□□□ 0.1
BEST3-201ENST00000266661 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
BEST3-201ENST00000266661 CCDC61Q9Y6R9 512 aa15.65■□□□□ 0.1
BEST3-201ENST00000266661 RGPD8O14715 1765 aaPredicted RBP15.65■□□□□ 0.1
BEST3-201ENST00000266661 DLG5Q8TDM6 1919 aa15.65■□□□□ 0.1
BEST3-201ENST00000266661 KIF24Q5T7B8 1368 aa15.64■□□□□ 0.09
BEST3-201ENST00000266661 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
BEST3-201ENST00000266661 SNX21Q969T3 373 aa15.64■□□□□ 0.09
BEST3-201ENST00000266661 LNPKQ9C0E8 428 aa15.64■□□□□ 0.09
BEST3-201ENST00000266661 CHMP4BQ9H444 224 aaKnown RBP15.64■□□□□ 0.09
BEST3-201ENST00000266661 PRR36Q9H6K5 1346 aa15.64■□□□□ 0.09
BEST3-201ENST00000266661 LMOD3Q0VAK6 560 aa15.63■□□□□ 0.09
BEST3-201ENST00000266661 CHMP5Q9NZZ3 219 aa15.63■□□□□ 0.09
BEST3-201ENST00000266661 MCM4P33991 863 aa15.62■□□□□ 0.09
BEST3-201ENST00000266661 TWISTNBQ3B726 338 aaPredicted RBP15.62■□□□□ 0.09
BEST3-201ENST00000266661 COG3Q96JB2 828 aa15.62■□□□□ 0.09
BEST3-201ENST00000266661 KIF2CQ99661 725 aa15.61■□□□□ 0.09
BEST3-201ENST00000266661 UBAP1LF5GYI3 381 aa15.61■□□□□ 0.09
BEST3-201ENST00000266661 PIP4K2BP78356 416 aa15.61■□□□□ 0.09
BEST3-201ENST00000266661 RRS1Q15050 365 aaKnown RBP15.61■□□□□ 0.09
BEST3-201ENST00000266661 C19orf44Q9H6X5 657 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms