RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TIGD1Q96MW7 591 aa13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 SH2B1Q9NRF2 756 aaPredicted RBP13.91□□□□□ -0.18
DNMT3A-201ENST00000264709 IFT140Q96RY7 1462 aa13.9□□□□□ -0.18
DNMT3A-201ENST00000264709 PIP4K2AP48426 406 aaPredicted RBP13.9□□□□□ -0.18
DNMT3A-201ENST00000264709 SLC4A10Q6U841 1118 aa13.9□□□□□ -0.18
DNMT3A-201ENST00000264709 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
DNMT3A-201ENST00000264709 SPATA31E1Q6ZUB1 1445 aa13.9□□□□□ -0.18
DNMT3A-201ENST00000264709 DCTN1Q14203 1278 aa13.9□□□□□ -0.18
DNMT3A-201ENST00000264709 IQCEQ6IPM2 695 aa13.9□□□□□ -0.18
DNMT3A-201ENST00000264709 MTHFSP49914 203 aa13.9□□□□□ -0.18
DNMT3A-201ENST00000264709 MAP3K11Q16584 847 aa13.9□□□□□ -0.18
DNMT3A-201ENST00000264709 BAG4O95429 457 aaKnown RBP13.9□□□□□ -0.18
DNMT3A-201ENST00000264709 KRT222Q8N1A0 295 aa13.9□□□□□ -0.18
DNMT3A-201ENST00000264709 RUFY1Q96T51 708 aa13.89□□□□□ -0.19
DNMT3A-201ENST00000264709 TNMDQ9H2S6 317 aa13.89□□□□□ -0.19
DNMT3A-201ENST00000264709 GSDMDP57764 484 aa13.89□□□□□ -0.19
DNMT3A-201ENST00000264709 LRSAM1Q6UWE0 723 aa13.89□□□□□ -0.19
DNMT3A-201ENST00000264709 AK9Q5TCS8 1911 aa13.89□□□□□ -0.19
DNMT3A-201ENST00000264709 FILIP1Q7Z7B0 1213 aa13.89□□□□□ -0.19
DNMT3A-201ENST00000264709 ABCC2Q92887 1545 aa13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 GBP3Q9H0R5 595 aa13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 CCAR2Q8N163 923 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 CBFA2T2O43439 604 aa13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 C20orf194Q5TEA3 1177 aa13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 CTAGE5O15320 804 aa13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 PRM3Q9NNZ6 103 aa13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 RDXP35241 583 aaKnown RBP13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 ERC1Q8IUD2 1116 aa13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 ARHGAP45Q92619 1136 aa13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 SDF4Q9BRK5 362 aa13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 RPGRIP1LQ68CZ1 1315 aa13.88□□□□□ -0.19
DNMT3A-201ENST00000264709 GOLGA6L9A6NEM1 432 aa13.87□□□□□ -0.19
DNMT3A-201ENST00000264709 ANAPC15P60006 121 aa13.87□□□□□ -0.19
DNMT3A-201ENST00000264709 MCM3P25205 808 aa13.87□□□□□ -0.19
DNMT3A-201ENST00000264709 OLFM4Q6UX06 510 aa13.87□□□□□ -0.19
DNMT3A-201ENST00000264709 TXLNBQ8N3L3 684 aa13.87□□□□□ -0.19
DNMT3A-201ENST00000264709 FIBPO43427 364 aa13.87□□□□□ -0.19
DNMT3A-201ENST00000264709 FCHSD2O94868 740 aa13.87□□□□□ -0.19
DNMT3A-201ENST00000264709 NUP62CLQ9H1M0 184 aa13.87□□□□□ -0.19
DNMT3A-201ENST00000264709 APPP05067 770 aa13.87□□□□□ -0.19
DNMT3A-201ENST00000264709 CCDC171Q6TFL3 1326 aa13.86□□□□□ -0.19
DNMT3A-201ENST00000264709 WDR62O43379 1518 aa13.86□□□□□ -0.19
DNMT3A-201ENST00000264709 UBXN4Q92575 508 aa13.86□□□□□ -0.19
DNMT3A-201ENST00000264709 NOB1Q9ULX3 412 aaKnown RBP13.86□□□□□ -0.19
DNMT3A-201ENST00000264709 POTEB2H3BUK9 544 aa13.86□□□□□ -0.19
DNMT3A-201ENST00000264709 IFIT2P09913 472 aaKnown RBP13.86□□□□□ -0.19
DNMT3A-201ENST00000264709 POLR3AO14802 1390 aaPredicted RBP13.86□□□□□ -0.19
DNMT3A-201ENST00000264709 GABPB1Q06547 395 aaPredicted RBP13.86□□□□□ -0.19
DNMT3A-201ENST00000264709 SFPQP23246 707 aaKnown RBP eCLIP13.86□□□□□ -0.19
DNMT3A-201ENST00000264709 XPCQ01831 940 aaPredicted RBP13.86□□□□□ -0.19
DNMT3A-201ENST00000264709 SYNE3Q6ZMZ3 975 aa13.86□□□□□ -0.19
DNMT3A-201ENST00000264709 CPLX1O14810 134 aa13.85□□□□□ -0.19
DNMT3A-201ENST00000264709 UBE2HP62256 183 aa13.85□□□□□ -0.19
DNMT3A-201ENST00000264709 TMCO3Q6UWJ1 677 aa13.85□□□□□ -0.19
DNMT3A-201ENST00000264709 ZSCAN23Q3MJ62 389 aa13.85□□□□□ -0.19
DNMT3A-201ENST00000264709 CYP46A1Q9Y6A2 500 aa13.85□□□□□ -0.19
DNMT3A-201ENST00000264709 ADGRL2O95490 1459 aa13.85□□□□□ -0.19
DNMT3A-201ENST00000264709 PTPN14Q15678 1187 aa13.85□□□□□ -0.19
DNMT3A-201ENST00000264709 H0YHG0 523 aa13.85□□□□□ -0.19
DNMT3A-201ENST00000264709 GNAI2P04899 355 aa13.84□□□□□ -0.19
DNMT3A-201ENST00000264709 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
DNMT3A-201ENST00000264709 NEXNQ0ZGT2 675 aa13.84□□□□□ -0.19
DNMT3A-201ENST00000264709 ZSCAN12O43309 604 aa13.84□□□□□ -0.19
DNMT3A-201ENST00000264709 KRT32Q14532 448 aa13.84□□□□□ -0.19
DNMT3A-201ENST00000264709 TAOK2Q9UL54 1235 aa13.84□□□□□ -0.19
DNMT3A-201ENST00000264709 NSD3Q9BZ95 1437 aa13.84□□□□□ -0.19
DNMT3A-201ENST00000264709 SRRTQ9BXP5 876 aaKnown RBP13.84□□□□□ -0.19
DNMT3A-201ENST00000264709 PPP4R3BQ5MIZ7 849 aa13.84□□□□□ -0.19
DNMT3A-201ENST00000264709 USP25Q9UHP3 1055 aa13.84□□□□□ -0.19
DNMT3A-201ENST00000264709 V9GYY5 206 aaPredicted RBP13.83□□□□□ -0.2
DNMT3A-201ENST00000264709 PTPRKQ15262 1439 aa13.83□□□□□ -0.2
DNMT3A-201ENST00000264709 DDX19AQ9NUU7 478 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-201ENST00000264709 EXOSC9Q06265 439 aaKnown RBP13.83□□□□□ -0.2
DNMT3A-201ENST00000264709 FSD2A1L4K1 749 aa13.83□□□□□ -0.2
DNMT3A-201ENST00000264709 ZNF445P59923 1031 aa13.83□□□□□ -0.2
DNMT3A-201ENST00000264709 LRRCC1Q9C099 1032 aa13.83□□□□□ -0.2
DNMT3A-201ENST00000264709 SYNMO15061 1565 aa13.83□□□□□ -0.2
DNMT3A-201ENST00000264709 INTS4Q96HW7 963 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 NUCB1Q02818 461 aa13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 TRIM29Q14134 588 aa13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 DDX11Q96FC9 970 aa13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 DUOX2Q9NRD8 1548 aa13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 IVLP07476 585 aa13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 SMARCE1Q969G3 411 aa13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 MRC2Q9UBG0 1479 aa13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 SAFB2Q14151 953 aaKnown RBP eCLIP13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 CEP89Q96ST8 783 aa13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 BMS1Q14692 1282 aaKnown RBP13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 JAKMIP3Q5VZ66 844 aa13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 UBTFL1P0CB47 393 aaPredicted RBP13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 MAP9Q49MG5 647 aa13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 DACH1Q9UI36 760 aa13.82□□□□□ -0.2
DNMT3A-201ENST00000264709 TWISTNBQ3B726 338 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-201ENST00000264709 CLASRPQ8N2M8 674 aaKnown RBP13.81□□□□□ -0.2
DNMT3A-201ENST00000264709 KIAA0754O94854 1291 aa13.81□□□□□ -0.2
DNMT3A-201ENST00000264709 TUBBP07437 444 aa13.81□□□□□ -0.2
DNMT3A-201ENST00000264709 ZNF500O60304 480 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-201ENST00000264709 FKBP5Q13451 457 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-201ENST00000264709 FOXD4L6Q3SYB3 417 aaPredicted RBP13.81□□□□□ -0.2
DNMT3A-201ENST00000264709 FOXD4L3Q6VB84 417 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms