RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 TRMT1Q9NXH9 659 aaKnown RBP17.97■□□□□ 0.47
CASC3-201ENST00000264645 GIMAP6Q6P9H5 292 aa17.97■□□□□ 0.47
CASC3-201ENST00000264645 RPAP2Q8IXW5 612 aaPredicted RBP17.97■□□□□ 0.47
CASC3-201ENST00000264645 TESK2Q96S53 571 aa17.97■□□□□ 0.47
CASC3-201ENST00000264645 IL1RAPL2Q9NP60 686 aa17.97■□□□□ 0.47
CASC3-201ENST00000264645 PES1O00541 588 aaKnown RBP17.96■□□□□ 0.47
CASC3-201ENST00000264645 PDILTQ8N807 584 aa17.96■□□□□ 0.47
CASC3-201ENST00000264645 C9orf78Q9NZ63 289 aaPredicted RBP17.96■□□□□ 0.47
CASC3-201ENST00000264645 CALCOCO1Q9P1Z2 691 aa17.96■□□□□ 0.47
CASC3-201ENST00000264645 TULP1O00294 542 aaPredicted RBP17.96■□□□□ 0.47
CASC3-201ENST00000264645 STK3Q13188 491 aa17.96■□□□□ 0.47
CASC3-201ENST00000264645 GNAI2P04899 355 aa17.96■□□□□ 0.47
CASC3-201ENST00000264645 RALGAPBQ86X10 1494 aa17.96■□□□□ 0.47
CASC3-201ENST00000264645 TERF1P54274 439 aa17.96■□□□□ 0.46
CASC3-201ENST00000264645 TMX3Q96JJ7 454 aa17.96■□□□□ 0.46
CASC3-201ENST00000264645 A0A0G2JS52 829 aa17.95■□□□□ 0.46
CASC3-201ENST00000264645 C17orf53Q8N3J3 647 aaPredicted RBP17.95■□□□□ 0.46
CASC3-201ENST00000264645 AFAP1Q8N556 730 aa17.95■□□□□ 0.46
CASC3-201ENST00000264645 CCDC34Q96HJ3 373 aa17.95■□□□□ 0.46
CASC3-201ENST00000264645 POLR3GO15318 223 aaPredicted RBP17.95■□□□□ 0.46
CASC3-201ENST00000264645 GNAI3P08754 354 aa17.95■□□□□ 0.46
CASC3-201ENST00000264645 GTF2F1P35269 517 aaKnown RBP eCLIP17.95■□□□□ 0.463e-11■■■□□ 18.8
CASC3-201ENST00000264645 LEKR1Q6ZMV7 388 aa17.95■□□□□ 0.46
CASC3-201ENST00000264645 UBXN4Q92575 508 aa17.95■□□□□ 0.46
CASC3-201ENST00000264645 PTPRGP23470 1445 aa17.95■□□□□ 0.46
CASC3-201ENST00000264645 ZNF428Q96B54 188 aa17.95■□□□□ 0.46
CASC3-201ENST00000264645 SPATA32Q96LK8 384 aa17.95■□□□□ 0.46
CASC3-201ENST00000264645 APPP05067 770 aa17.94■□□□□ 0.46
CASC3-201ENST00000264645 CHMP4AQ9BY43 222 aa17.94■□□□□ 0.46
CASC3-201ENST00000264645 CYP46A1Q9Y6A2 500 aa17.94■□□□□ 0.46
CASC3-201ENST00000264645 CCDC83Q8IWF9 413 aa17.94■□□□□ 0.46
CASC3-201ENST00000264645 DDX54Q8TDD1 881 aaKnown RBP17.94■□□□□ 0.46
CASC3-201ENST00000264645 RBM25P49756 843 aaKnown RBP17.93■□□□□ 0.46
CASC3-201ENST00000264645 UVSSAQ2YD98 709 aa17.93■□□□□ 0.46
CASC3-201ENST00000264645 ERBB4Q15303 1308 aa17.93■□□□□ 0.46
CASC3-201ENST00000264645 POLA1P09884 1462 aaPredicted RBP17.93■□□□□ 0.46
CASC3-201ENST00000264645 ALDH1L2Q3SY69 923 aa17.93■□□□□ 0.46
CASC3-201ENST00000264645 PLCD3Q8N3E9 789 aa17.93■□□□□ 0.46
CASC3-201ENST00000264645 KIF18AQ8NI77 898 aa17.93■□□□□ 0.46
CASC3-201ENST00000264645 AK7Q96M32 723 aa17.93■□□□□ 0.46
CASC3-201ENST00000264645 HECW1Q76N89 1606 aa17.93■□□□□ 0.46
CASC3-201ENST00000264645 TIGD1Q96MW7 591 aa17.92■□□□□ 0.46
CASC3-201ENST00000264645 PPP1R9BQ96SB3 815 aa17.92■□□□□ 0.46
CASC3-201ENST00000264645 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.92■□□□□ 0.46
CASC3-201ENST00000264645 V9GYY5 206 aaPredicted RBP17.92■□□□□ 0.46
CASC3-201ENST00000264645 CWC27Q6UX04 472 aaKnown RBP17.92■□□□□ 0.46
CASC3-201ENST00000264645 SPATA31E1Q6ZUB1 1445 aa17.92■□□□□ 0.46
CASC3-201ENST00000264645 JAKMIP1Q96N16 626 aaKnown RBP17.92■□□□□ 0.46
CASC3-201ENST00000264645 CLIP2Q9UDT6 1046 aa17.92■□□□□ 0.46
CASC3-201ENST00000264645 CLASRPQ8N2M8 674 aaKnown RBP17.91■□□□□ 0.46
CASC3-201ENST00000264645 PSMA5P28066 241 aa17.91■□□□□ 0.46
CASC3-201ENST00000264645 ZNF445P59923 1031 aa17.91■□□□□ 0.46
CASC3-201ENST00000264645 TSHZ3Q63HK5 1081 aa17.91■□□□□ 0.46
CASC3-201ENST00000264645 TTLL5Q6EMB2 1281 aa17.91■□□□□ 0.46
CASC3-201ENST00000264645 CPLX1O14810 134 aa17.91■□□□□ 0.46
CASC3-201ENST00000264645 TMCO3Q6UWJ1 677 aa17.91■□□□□ 0.46
CASC3-201ENST00000264645 ERCC6Q03468 1493 aa17.91■□□□□ 0.46
CASC3-201ENST00000264645 U2AF2P26368 475 aaKnown RBP eCLIP17.91■□□□□ 0.464e-7■■■□□ 14.7
CASC3-201ENST00000264645 TTC22Q5TAA0 569 aa17.91■□□□□ 0.46
CASC3-201ENST00000264645 USP48Q86UV5 1035 aa17.91■□□□□ 0.46
CASC3-201ENST00000264645 KIF20AO95235 890 aa17.9■□□□□ 0.46
CASC3-201ENST00000264645 SDSP20132 328 aa17.9■□□□□ 0.46
CASC3-201ENST00000264645 CCDC186Q7Z3E2 898 aa17.9■□□□□ 0.46
CASC3-201ENST00000264645 TPM1P09493 284 aa17.9■□□□□ 0.46
CASC3-201ENST00000264645 CASTP20810 708 aaKnown RBP17.9■□□□□ 0.46
CASC3-201ENST00000264645 C16orf71Q8IYS4 520 aaPredicted RBP17.9■□□□□ 0.46
CASC3-201ENST00000264645 KRT222Q8N1A0 295 aa17.9■□□□□ 0.46
CASC3-201ENST00000264645 MYRIPQ8NFW9 859 aa17.9■□□□□ 0.46
CASC3-201ENST00000264645 HSP90AB4PQ58FF6 505 aa17.89■□□□□ 0.45
CASC3-201ENST00000264645 SYNE3Q6ZMZ3 975 aa17.89■□□□□ 0.45
CASC3-201ENST00000264645 PDRG1Q9NUG6 133 aa17.89■□□□□ 0.45
CASC3-201ENST00000264645 ME1P48163 572 aa17.88■□□□□ 0.45
CASC3-201ENST00000264645 DCTN1Q14203 1278 aa17.88■□□□□ 0.45
CASC3-201ENST00000264645 VGLL3A8MV65 326 aa17.88■□□□□ 0.45
CASC3-201ENST00000264645 FCHSD2O94868 740 aa17.88■□□□□ 0.45
CASC3-201ENST00000264645 G3BP1Q13283 466 aaKnown RBP eCLIP17.88■□□□□ 0.45
CASC3-201ENST00000264645 CAMSAP2Q08AD1 1489 aa17.88■□□□□ 0.45
CASC3-201ENST00000264645 FSD1Q9BTV5 496 aa17.88■□□□□ 0.45
CASC3-201ENST00000264645 CNPY2Q9Y2B0 182 aa17.88■□□□□ 0.45
CASC3-201ENST00000264645 UBE2HP62256 183 aa17.87■□□□□ 0.45
CASC3-201ENST00000264645 ACBD3Q9H3P7 528 aa17.87■□□□□ 0.45
CASC3-201ENST00000264645 TFIP11Q9UBB9 837 aaKnown RBP17.87■□□□□ 0.45
CASC3-201ENST00000264645 ZBTB40Q9NUA8 1239 aa17.87■□□□□ 0.45
CASC3-201ENST00000264645 TEX14Q8IWB6 1497 aa17.87■□□□□ 0.45
CASC3-201ENST00000264645 STX6O43752 255 aa17.87■□□□□ 0.45
CASC3-201ENST00000264645 MX1P20591 662 aa17.87■□□□□ 0.45
CASC3-201ENST00000264645 NUTM1Q86Y26 1132 aa17.87■□□□□ 0.45
CASC3-201ENST00000264645 NOL10Q9BSC4 688 aaKnown RBP17.87■□□□□ 0.45
CASC3-201ENST00000264645 TOMM22Q9NS69 142 aa17.87■□□□□ 0.45
CASC3-201ENST00000264645 LMBRD1Q9NUN5 540 aa17.86■□□□□ 0.45
CASC3-201ENST00000264645 H0YHG0 523 aa17.86■□□□□ 0.45
CASC3-201ENST00000264645 ZNF500O60304 480 aaPredicted RBP17.86■□□□□ 0.45
CASC3-201ENST00000264645 NFE2L2Q16236 605 aa17.86■□□□□ 0.45
CASC3-201ENST00000264645 TSR1Q2NL82 804 aaKnown RBP17.86■□□□□ 0.45
CASC3-201ENST00000264645 ZNF165P49910 485 aa17.86■□□□□ 0.45
CASC3-201ENST00000264645 SERPINC1P01008 464 aa17.85■□□□□ 0.45
CASC3-201ENST00000264645 CEP135Q66GS9 1140 aa17.85■□□□□ 0.45
CASC3-201ENST00000264645 CEP57L1Q8IYX8 460 aa17.85■□□□□ 0.45
CASC3-201ENST00000264645 NGDNQ8NEJ9 315 aaKnown RBP17.85■□□□□ 0.45
CASC3-201ENST00000264645 TMEM63CQ9P1W3 806 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms