RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 GCC2Q8IWJ2 1684 aa19.59■□□□□ 0.73
GPC1-201ENST00000264039 API5Q9BZZ5 524 aaKnown RBP19.58■□□□□ 0.73
GPC1-201ENST00000264039 TRMT1Q9NXH9 659 aaKnown RBP19.58■□□□□ 0.73
GPC1-201ENST00000264039 CNPY2Q9Y2B0 182 aa19.58■□□□□ 0.73
GPC1-201ENST00000264039 FILIP1Q7Z7B0 1213 aa19.58■□□□□ 0.72
GPC1-201ENST00000264039 CCAR2Q8N163 923 aaKnown RBP19.58■□□□□ 0.72
GPC1-201ENST00000264039 GOLGA6L19H0YKK7 550 aa19.57■□□□□ 0.72
GPC1-201ENST00000264039 PIBF1Q8WXW3 757 aa19.57■□□□□ 0.72
GPC1-201ENST00000264039 BICD2Q8TD16 824 aa19.57■□□□□ 0.72
GPC1-201ENST00000264039 BECN2A8MW95 431 aa19.56■□□□□ 0.72
GPC1-201ENST00000264039 FAM184AQ8NB25 1140 aa19.56■□□□□ 0.72
GPC1-201ENST00000264039 TSPYL6Q8N831 410 aa19.56■□□□□ 0.72
GPC1-201ENST00000264039 ASXL1Q8IXJ9 1541 aa19.56■□□□□ 0.72
GPC1-201ENST00000264039 USP26Q9BXU7 913 aa19.55■□□□□ 0.72
GPC1-201ENST00000264039 PLB1Q6P1J6 1458 aa19.55■□□□□ 0.72
GPC1-201ENST00000264039 RSPH4AQ5TD94 716 aa19.55■□□□□ 0.72
GPC1-201ENST00000264039 AFAP1Q8N556 730 aa19.55■□□□□ 0.72
GPC1-201ENST00000264039 KIF2CQ99661 725 aa19.55■□□□□ 0.72
GPC1-201ENST00000264039 ARHGEF11O15085 1522 aa19.55■□□□□ 0.72
GPC1-201ENST00000264039 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
GPC1-201ENST00000264039 INSRP06213 1382 aa19.55■□□□□ 0.72
GPC1-201ENST00000264039 WDR33Q9C0J8 1336 aaKnown RBP19.55■□□□□ 0.72
GPC1-201ENST00000264039 PTGS1P23219 599 aa19.55■□□□□ 0.72
GPC1-201ENST00000264039 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.55■□□□□ 0.72
GPC1-201ENST00000264039 CEBPZQ03701 1054 aaKnown RBP19.54■□□□□ 0.72
GPC1-201ENST00000264039 GNL2Q13823 731 aaKnown RBP19.54■□□□□ 0.72
GPC1-201ENST00000264039 TTC22Q5TAA0 569 aa19.54■□□□□ 0.72
GPC1-201ENST00000264039 CCDC186Q7Z3E2 898 aa19.54■□□□□ 0.72
GPC1-201ENST00000264039 ATP6V1DQ9Y5K8 247 aa19.54■□□□□ 0.72
GPC1-201ENST00000264039 GPATCH8Q9UKJ3 1502 aaKnown RBP19.54■□□□□ 0.72
GPC1-201ENST00000264039 MBD5Q9P267 1494 aa19.54■□□□□ 0.72
GPC1-201ENST00000264039 SKIDA1Q1XH10 827 aa19.54■□□□□ 0.72
GPC1-201ENST00000264039 CERS3Q8IU89 383 aa19.54■□□□□ 0.72
GPC1-201ENST00000264039 ADGRF5Q8IZF2 1346 aa19.53■□□□□ 0.72
GPC1-201ENST00000264039 CCDC183Q5T5S1 534 aa19.53■□□□□ 0.72
GPC1-201ENST00000264039 PLEKHM2Q8IWE5 1019 aa19.53■□□□□ 0.72
GPC1-201ENST00000264039 POLR3GO15318 223 aaPredicted RBP19.53■□□□□ 0.72
GPC1-201ENST00000264039 SPAG9O60271 1321 aaKnown RBP19.53■□□□□ 0.72
GPC1-201ENST00000264039 CT47B1P0C2W7 299 aaPredicted RBP19.53■□□□□ 0.72
GPC1-201ENST00000264039 GTF2F1P35269 517 aaKnown RBP eCLIP19.53■□□□□ 0.72
GPC1-201ENST00000264039 HOMER1Q86YM7 354 aa19.53■□□□□ 0.72
GPC1-201ENST00000264039 PIK3C2GO75747 1445 aa19.53■□□□□ 0.72
GPC1-201ENST00000264039 GSPT1P15170 499 aaKnown RBP19.52■□□□□ 0.72
GPC1-201ENST00000264039 DNMBPQ6XZF7 1577 aa19.52■□□□□ 0.72
GPC1-201ENST00000264039 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.72
GPC1-201ENST00000264039 CCDC192P0DO97 292 aa19.52■□□□□ 0.72
GPC1-201ENST00000264039 NAA30Q147X3 362 aaPredicted RBP19.52■□□□□ 0.72
GPC1-201ENST00000264039 IL1RAPL2Q9NP60 686 aa19.52■□□□□ 0.71
GPC1-201ENST00000264039 PDLIM2Q96JY6 352 aa19.51■□□□□ 0.71
GPC1-201ENST00000264039 HDGFL2Q7Z4V5 671 aaPredicted RBP19.51■□□□□ 0.71
GPC1-201ENST00000264039 FMNL2Q96PY5 1086 aa19.5■□□□□ 0.71
GPC1-201ENST00000264039 PYCARDQ9ULZ3 195 aa19.5■□□□□ 0.71
GPC1-201ENST00000264039 CARMIL2Q6F5E8 1435 aa19.5■□□□□ 0.71
GPC1-201ENST00000264039 NLRP1Q9C000 1473 aa19.5■□□□□ 0.71
GPC1-201ENST00000264039 ZNF428Q96B54 188 aa19.5■□□□□ 0.71
GPC1-201ENST00000264039 GNAI1P63096 354 aa19.5■□□□□ 0.71
GPC1-201ENST00000264039 UTP14CQ5TAP6 766 aaKnown RBP19.5■□□□□ 0.71
GPC1-201ENST00000264039 TERF2IPQ9NYB0 399 aa19.49■□□□□ 0.71
GPC1-201ENST00000264039 A2MP01023 1474 aa19.49■□□□□ 0.71
GPC1-201ENST00000264039 EVC2Q86UK5 1308 aa19.49■□□□□ 0.71
GPC1-201ENST00000264039 ZBTB7BO15156 539 aaPredicted RBP19.49■□□□□ 0.71
GPC1-201ENST00000264039 EFCAB2Q5VUJ9 269 aa19.49■□□□□ 0.71
GPC1-201ENST00000264039 KANK1Q14678 1352 aa19.48■□□□□ 0.71
GPC1-201ENST00000264039 HTATSF1O43719 755 aaKnown RBP19.48■□□□□ 0.71
GPC1-201ENST00000264039 NRDCO43847 1150 aa19.48■□□□□ 0.71
GPC1-201ENST00000264039 TAF3Q5VWG9 929 aa19.48■□□□□ 0.71
GPC1-201ENST00000264039 FAM83GA6ND36 823 aa19.47■□□□□ 0.71
GPC1-201ENST00000264039 LRMPQ12912 555 aa19.47■□□□□ 0.71
GPC1-201ENST00000264039 CCDC83Q8IWF9 413 aa19.47■□□□□ 0.71
GPC1-201ENST00000264039 FAM177A1Q8N128 213 aaPredicted RBP19.47■□□□□ 0.71
GPC1-201ENST00000264039 TIGD1Q96MW7 591 aa19.47■□□□□ 0.71
GPC1-201ENST00000264039 TRIM34Q9BYJ4 488 aa19.47■□□□□ 0.71
GPC1-201ENST00000264039 TFIP11Q9UBB9 837 aaKnown RBP19.47■□□□□ 0.71
GPC1-201ENST00000264039 STAC3Q96MF2 364 aa19.47■□□□□ 0.71
GPC1-201ENST00000264039 MCM2P49736 904 aa19.47■□□□□ 0.71
GPC1-201ENST00000264039 ZNF710Q8N1W2 664 aa19.47■□□□□ 0.71
GPC1-201ENST00000264039 SYTL4Q96C24 671 aaPredicted RBP19.47■□□□□ 0.71
GPC1-201ENST00000264039 TNMDQ9H2S6 317 aa19.47■□□□□ 0.71
GPC1-201ENST00000264039 F6X3S4 739 aa19.46■□□□□ 0.71
GPC1-201ENST00000264039 KDM4AO75164 1064 aa19.46■□□□□ 0.71
GPC1-201ENST00000264039 NUTM2FA1L443 756 aa19.46■□□□□ 0.71
GPC1-201ENST00000264039 LUZP1Q86V48 1076 aa19.46■□□□□ 0.71
GPC1-201ENST00000264039 MIS18AQ9NYP9 233 aa19.46■□□□□ 0.71
GPC1-201ENST00000264039 ARHGEF12Q9NZN5 1544 aa19.46■□□□□ 0.71
GPC1-201ENST00000264039 HSP90B1P14625 803 aaKnown RBP19.46■□□□□ 0.71
GPC1-201ENST00000264039 AK9Q5TCS8 1911 aa19.45■□□□□ 0.7
GPC1-201ENST00000264039 PDIA4P13667 645 aaKnown RBP19.45■□□□□ 0.7
GPC1-201ENST00000264039 DDIT3P35638 169 aa19.45■□□□□ 0.7
GPC1-201ENST00000264039 STK3Q13188 491 aa19.45■□□□□ 0.7
GPC1-201ENST00000264039 KRT24Q2M2I5 525 aa19.45■□□□□ 0.7
GPC1-201ENST00000264039 GTF2E1P29083 439 aaPredicted RBP19.44■□□□□ 0.7
GPC1-201ENST00000264039 PAXIP1Q6ZW49 1069 aaPredicted RBP19.44■□□□□ 0.7
GPC1-201ENST00000264039 ZDHHC9Q9Y397 364 aa19.44■□□□□ 0.7
GPC1-201ENST00000264039 DNMT1P26358 1616 aaKnown RBP19.44■□□□□ 0.7
GPC1-201ENST00000264039 SLC4A2P04920 1241 aa19.44■□□□□ 0.7
GPC1-201ENST00000264039 TPM3P06753 285 aa19.44■□□□□ 0.7
GPC1-201ENST00000264039 MX1P20591 662 aa19.44■□□□□ 0.7
GPC1-201ENST00000264039 DNM1Q05193 864 aaKnown RBP19.44■□□□□ 0.7
GPC1-201ENST00000264039 TMX1Q9H3N1 280 aa19.44■□□□□ 0.7
GPC1-201ENST00000264039 OGFRQ9NZT2 677 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms