RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 EIF4A2Q14240 407 aaKnown RBP10.49□□□□□ -0.73
GTF3C3-201ENST00000263956 MSH5O43196 834 aa10.49□□□□□ -0.73
GTF3C3-201ENST00000263956 HOXC9P31274 260 aa10.49□□□□□ -0.73
GTF3C3-201ENST00000263956 PPP4R2Q9NY27 417 aa10.49□□□□□ -0.73
GTF3C3-201ENST00000263956 NEXNQ0ZGT2 675 aa10.48□□□□□ -0.73
GTF3C3-201ENST00000263956 ZKSCAN2Q63HK3 967 aa10.48□□□□□ -0.73
GTF3C3-201ENST00000263956 POLR3AO14802 1390 aaPredicted RBP10.48□□□□□ -0.73
GTF3C3-201ENST00000263956 BRINP3Q76B58 766 aa10.48□□□□□ -0.73
GTF3C3-201ENST00000263956 API5Q9BZZ5 524 aaKnown RBP10.48□□□□□ -0.73
GTF3C3-201ENST00000263956 SETBP1Q9Y6X0 1596 aa10.48□□□□□ -0.73
GTF3C3-201ENST00000263956 ATP7BP35670 1465 aa10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 TCERG1O14776 1098 aaKnown RBP10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 IFNL2Q8IZJ0 200 aa10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 PTCH1Q13635 1447 aa10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 LAMC1P11047 1609 aa10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 BTG4Q9NY30 223 aa10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 BCORL1Q5H9F3 1711 aa10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 KDM5AP29375 1690 aaKnown RBP10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 TRPM1Q7Z4N2 1603 aa10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 SBNO1A3KN83 1393 aa10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 CCDC30Q5VVM6 783 aa10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 UPF2Q9HAU5 1272 aaKnown RBP10.47□□□□□ -0.73
GTF3C3-201ENST00000263956 BTBD11A6QL63 1104 aa10.46□□□□□ -0.73
GTF3C3-201ENST00000263956 HMGB2P26583 209 aaKnown RBP10.46□□□□□ -0.73
GTF3C3-201ENST00000263956 CERKQ8TCT0 537 aa10.46□□□□□ -0.73
GTF3C3-201ENST00000263956 EXOSC9Q06265 439 aaKnown RBP10.46□□□□□ -0.74
GTF3C3-201ENST00000263956 FKBP5Q13451 457 aaPredicted RBP10.46□□□□□ -0.74
GTF3C3-201ENST00000263956 ZCRB1Q8TBF4 217 aaKnown RBP10.46□□□□□ -0.74
GTF3C3-201ENST00000263956 TMOD3Q9NYL9 352 aa10.46□□□□□ -0.74
GTF3C3-201ENST00000263956 USP6P35125 1406 aa10.46□□□□□ -0.74
GTF3C3-201ENST00000263956 TWISTNBQ3B726 338 aaPredicted RBP10.45□□□□□ -0.74
GTF3C3-201ENST00000263956 WWC1Q8IX03 1113 aa10.45□□□□□ -0.74
GTF3C3-201ENST00000263956 CDCA7LQ96GN5 454 aa10.45□□□□□ -0.74
GTF3C3-201ENST00000263956 TMEM131LA2VDJ0 1609 aa10.45□□□□□ -0.74
GTF3C3-201ENST00000263956 KIF16BQ96L93 1317 aa10.45□□□□□ -0.74
GTF3C3-201ENST00000263956 MCM10Q7L590 875 aa10.45□□□□□ -0.74
GTF3C3-201ENST00000263956 IL2RBP14784 551 aa10.45□□□□□ -0.74
GTF3C3-201ENST00000263956 EYA1Q99502 592 aa10.45□□□□□ -0.74
GTF3C3-201ENST00000263956 TAF7Q15545 349 aaPredicted RBP10.44□□□□□ -0.74
GTF3C3-201ENST00000263956 MPRIPQ6WCQ1 1025 aa10.44□□□□□ -0.74
GTF3C3-201ENST00000263956 TSR2Q969E8 191 aaKnown RBP10.44□□□□□ -0.74
GTF3C3-201ENST00000263956 NEURL4Q96JN8 1562 aa10.44□□□□□ -0.74
GTF3C3-201ENST00000263956 HMMRO75330 724 aa10.44□□□□□ -0.74
GTF3C3-201ENST00000263956 HDGFL1Q5TGJ6 251 aa10.44□□□□□ -0.74
GTF3C3-201ENST00000263956 ERICH6BQ5W0A0 696 aa10.44□□□□□ -0.74
GTF3C3-201ENST00000263956 CHMP3Q9Y3E7 222 aa10.44□□□□□ -0.74
GTF3C3-201ENST00000263956 DLC1Q96QB1 1528 aa10.44□□□□□ -0.74
GTF3C3-201ENST00000263956 TAF7LQ5H9L4 462 aa10.44□□□□□ -0.74
GTF3C3-201ENST00000263956 TMX4Q9H1E5 349 aaPredicted RBP10.44□□□□□ -0.74
GTF3C3-201ENST00000263956 NRXN1Q9ULB1 1477 aa10.43□□□□□ -0.74
GTF3C3-201ENST00000263956 SLIT1O75093 1534 aa10.43□□□□□ -0.74
GTF3C3-201ENST00000263956 DCTN1Q14203 1278 aa10.43□□□□□ -0.74
GTF3C3-201ENST00000263956 DDB1Q16531 1140 aa10.43□□□□□ -0.74
GTF3C3-201ENST00000263956 THUMPD2Q9BTF0 503 aaKnown RBP10.43□□□□□ -0.74
GTF3C3-201ENST00000263956 RWDD1Q9H446 243 aaPredicted RBP10.43□□□□□ -0.74
GTF3C3-201ENST00000263956 ARHGAP23Q9P227 1491 aa10.43□□□□□ -0.74
GTF3C3-201ENST00000263956 CT47B1P0C2W7 299 aaPredicted RBP10.43□□□□□ -0.74
GTF3C3-201ENST00000263956 AEBP1Q8IUX7 1158 aa10.43□□□□□ -0.74
GTF3C3-201ENST00000263956 RIC3Q7Z5B4 369 aa10.43□□□□□ -0.74
GTF3C3-201ENST00000263956 CDCA7Q9BWT1 371 aaPredicted RBP10.43□□□□□ -0.74
GTF3C3-201ENST00000263956 AIMP1Q12904 312 aaKnown RBP10.42□□□□□ -0.74
GTF3C3-201ENST00000263956 RRP1P56182 461 aaKnown RBP10.42□□□□□ -0.74
GTF3C3-201ENST00000263956 DZIP1LQ8IYY4 767 aaKnown RBP10.42□□□□□ -0.74
GTF3C3-201ENST00000263956 IFT57Q9NWB7 429 aa10.42□□□□□ -0.74
GTF3C3-201ENST00000263956 C9orf78Q9NZ63 289 aaPredicted RBP10.42□□□□□ -0.74
GTF3C3-201ENST00000263956 DIP2AQ14689 1571 aa10.42□□□□□ -0.74
GTF3C3-201ENST00000263956 PTPRUQ92729 1446 aa10.42□□□□□ -0.74
GTF3C3-201ENST00000263956 SPATA31A3Q5VYP0 1347 aa10.41□□□□□ -0.74
GTF3C3-201ENST00000263956 TULP4Q9NRJ4 1543 aa10.41□□□□□ -0.74
GTF3C3-201ENST00000263956 IL13P35225 146 aa10.41□□□□□ -0.74
GTF3C3-201ENST00000263956 TECPR2O15040 1411 aa10.41□□□□□ -0.74
GTF3C3-201ENST00000263956 PLIN1O60240 522 aa10.41□□□□□ -0.74
GTF3C3-201ENST00000263956 AKAP4Q5JQC9 854 aa10.41□□□□□ -0.74
GTF3C3-201ENST00000263956 ZNF428Q96B54 188 aa10.41□□□□□ -0.74
GTF3C3-201ENST00000263956 MROH2AA6NES4 1674 aa10.4□□□□□ -0.74
GTF3C3-201ENST00000263956 PTCD1O75127 700 aaKnown RBP10.4□□□□□ -0.74
GTF3C3-201ENST00000263956 USP21Q9UK80 565 aa10.4□□□□□ -0.74
GTF3C3-201ENST00000263956 NKTRP30414 1462 aaKnown RBP10.4□□□□□ -0.74
GTF3C3-201ENST00000263956 C1orf167Q5SNV9 1468 aa10.4□□□□□ -0.74
GTF3C3-201ENST00000263956 NCOA3Q9Y6Q9 1424 aa10.4□□□□□ -0.74
GTF3C3-201ENST00000263956 HTATSF1O43719 755 aaKnown RBP10.4□□□□□ -0.74
GTF3C3-201ENST00000263956 STARD3NLO95772 234 aa10.4□□□□□ -0.74
GTF3C3-201ENST00000263956 B4GALNT3Q6L9W6 998 aa10.4□□□□□ -0.74
GTF3C3-201ENST00000263956 ARHGEF25Q86VW2 580 aa10.4□□□□□ -0.74
GTF3C3-201ENST00000263956 SLFN5Q08AF3 891 aa10.4□□□□□ -0.75
GTF3C3-201ENST00000263956 KIF6Q6ZMV9 814 aa10.4□□□□□ -0.75
GTF3C3-201ENST00000263956 MIS18AQ9NYP9 233 aa10.4□□□□□ -0.75
GTF3C3-201ENST00000263956 C3P01024 1663 aa10.4□□□□□ -0.75
GTF3C3-201ENST00000263956 AATKQ6ZMQ8 1374 aa10.39□□□□□ -0.75
GTF3C3-201ENST00000263956 SLC4A2P04920 1241 aa10.39□□□□□ -0.75
GTF3C3-201ENST00000263956 DDX19BQ9UMR2 479 aa10.39□□□□□ -0.75
GTF3C3-201ENST00000263956 COG6Q9Y2V7 657 aa10.39□□□□□ -0.75
GTF3C3-201ENST00000263956 APBB1O00213 710 aa10.39□□□□□ -0.75
GTF3C3-201ENST00000263956 RGS3P49796 1198 aa10.38□□□□□ -0.75
GTF3C3-201ENST00000263956 MTHFSDQ2M296 383 aaKnown RBP10.38□□□□□ -0.75
GTF3C3-201ENST00000263956 CFAP44Q96MT7 982 aa10.38□□□□□ -0.75
GTF3C3-201ENST00000263956 KIAA0232Q92628 1395 aa10.38□□□□□ -0.75
GTF3C3-201ENST00000263956 DUSP27Q5VZP5 1158 aa10.38□□□□□ -0.75
GTF3C3-201ENST00000263956 CASC1Q6TDU7 716 aa10.38□□□□□ -0.75
GTF3C3-201ENST00000263956 FMNL2Q96PY5 1086 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms