RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 BMP2KQ9NSY1 1161 aaPredicted RBP17.64■□□□□ 0.41
CCDC6-201ENST00000263102 GBP2P32456 591 aaPredicted RBP17.64■□□□□ 0.41
CCDC6-201ENST00000263102 RNF214Q8ND24 703 aa17.64■□□□□ 0.41
CCDC6-201ENST00000263102 PANK1Q8TE04 598 aa17.64■□□□□ 0.41
CCDC6-201ENST00000263102 ZNF396Q96N95 335 aaPredicted RBP17.64■□□□□ 0.41
CCDC6-201ENST00000263102 CDC45O75419 566 aa17.63■□□□□ 0.41
CCDC6-201ENST00000263102 TRIM5Q9C035 493 aa17.63■□□□□ 0.41
CCDC6-201ENST00000263102 HDGFL1Q5TGJ6 251 aa17.63■□□□□ 0.41
CCDC6-201ENST00000263102 WWC3Q9ULE0 1092 aa17.63■□□□□ 0.41
CCDC6-201ENST00000263102 THEMISQ8N1K5 641 aaPredicted RBP17.63■□□□□ 0.41
CCDC6-201ENST00000263102 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
CCDC6-201ENST00000263102 EZRP15311 586 aaKnown RBP17.63■□□□□ 0.41
CCDC6-201ENST00000263102 NGLY1Q96IV0 654 aa17.63■□□□□ 0.41
CCDC6-201ENST00000263102 SERPINC1P01008 464 aa17.62■□□□□ 0.41
CCDC6-201ENST00000263102 ERCC4Q92889 916 aaPredicted RBP17.62■□□□□ 0.41
CCDC6-201ENST00000263102 GNAI3P08754 354 aa17.62■□□□□ 0.41
CCDC6-201ENST00000263102 NOL7Q9UMY1 257 aaKnown RBP17.62■□□□□ 0.41
CCDC6-201ENST00000263102 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
CCDC6-201ENST00000263102 USP47Q96K76 1375 aa17.62■□□□□ 0.41
CCDC6-201ENST00000263102 HIP1O00291 1037 aa17.61■□□□□ 0.41
CCDC6-201ENST00000263102 IDH1O75874 414 aaKnown RBP17.61■□□□□ 0.41
CCDC6-201ENST00000263102 ANKLE2Q86XL3 938 aa17.61■□□□□ 0.41
CCDC6-201ENST00000263102 CCDC112Q8NEF3 446 aa17.61■□□□□ 0.41
CCDC6-201ENST00000263102 PIP4K2AP48426 406 aaPredicted RBP17.61■□□□□ 0.41
CCDC6-201ENST00000263102 ZSCAN25Q6NSZ9 544 aa17.61■□□□□ 0.41
CCDC6-201ENST00000263102 RPGRQ92834 1020 aaKnown RBP17.61■□□□□ 0.41
CCDC6-201ENST00000263102 PODXL2Q9NZ53 605 aa17.61■□□□□ 0.41
CCDC6-201ENST00000263102 CCDC96Q2M329 555 aa17.61■□□□□ 0.41
CCDC6-201ENST00000263102 UBA5Q9GZZ9 404 aa17.61■□□□□ 0.41
CCDC6-201ENST00000263102 VPS8Q8N3P4 1428 aa17.61■□□□□ 0.41
CCDC6-201ENST00000263102 PRAM1Q96QH2 718 aa17.6■□□□□ 0.41
CCDC6-201ENST00000263102 PRKAR2BP31323 418 aa17.6■□□□□ 0.41
CCDC6-201ENST00000263102 GOLGA6L10A6NI86 522 aa17.59■□□□□ 0.41
CCDC6-201ENST00000263102 NUCB2P80303 420 aa17.59■□□□□ 0.41
CCDC6-201ENST00000263102 POTEJP0CG39 1038 aa17.59■□□□□ 0.41
CCDC6-201ENST00000263102 ZNF622Q969S3 477 aaKnown RBP eCLIP17.59■□□□□ 0.412e-7■□□□□ 9.9
CCDC6-201ENST00000263102 SLC26A8Q96RN1 970 aa17.59■□□□□ 0.41
CCDC6-201ENST00000263102 BTBD11A6QL63 1104 aa17.59■□□□□ 0.41
CCDC6-201ENST00000263102 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
CCDC6-201ENST00000263102 PPFIBP1Q86W92 1011 aa17.59■□□□□ 0.41
CCDC6-201ENST00000263102 DHX8Q14562 1220 aaKnown RBP17.59■□□□□ 0.41
CCDC6-201ENST00000263102 SEC63Q9UGP8 760 aaKnown RBP17.59■□□□□ 0.41
CCDC6-201ENST00000263102 CT47B1P0C2W7 299 aaPredicted RBP17.58■□□□□ 0.4
CCDC6-201ENST00000263102 FAM193AP78312 1265 aa17.58■□□□□ 0.4
CCDC6-201ENST00000263102 PTCD1O75127 700 aaKnown RBP17.57■□□□□ 0.4
CCDC6-201ENST00000263102 SULT6B1Q6IMI4 303 aa17.57■□□□□ 0.4
CCDC6-201ENST00000263102 FIBPO43427 364 aa17.57■□□□□ 0.4
CCDC6-201ENST00000263102 LUC7LQ9NQ29 371 aaKnown RBP17.57■□□□□ 0.4
CCDC6-201ENST00000263102 GNAI2P04899 355 aa17.57■□□□□ 0.4
CCDC6-201ENST00000263102 NFKBIBQ15653 356 aa17.57■□□□□ 0.4
CCDC6-201ENST00000263102 AACSQ86V21 672 aa17.57■□□□□ 0.4
CCDC6-201ENST00000263102 FAM177A1Q8N128 213 aaPredicted RBP17.57■□□□□ 0.4
CCDC6-201ENST00000263102 MKNK2Q9HBH9 465 aa17.57■□□□□ 0.4
CCDC6-201ENST00000263102 C22orf23Q9BZE7 217 aa17.57■□□□□ 0.4
CCDC6-201ENST00000263102 ZNF652Q9Y2D9 606 aa17.57■□□□□ 0.4
CCDC6-201ENST00000263102 MAP3K9P80192 1104 aa17.56■□□□□ 0.4
CCDC6-201ENST00000263102 TMOD3Q9NYL9 352 aa17.56■□□□□ 0.4
CCDC6-201ENST00000263102 STARD3NLO95772 234 aa17.56■□□□□ 0.4
CCDC6-201ENST00000263102 ME1P48163 572 aa17.56■□□□□ 0.4
CCDC6-201ENST00000263102 DZIP1Q86YF9 867 aaKnown RBP17.56■□□□□ 0.4
CCDC6-201ENST00000263102 SPC24Q8NBT2 197 aa17.56■□□□□ 0.4
CCDC6-201ENST00000263102 AIDAQ96BJ3 306 aa17.56■□□□□ 0.4
CCDC6-201ENST00000263102 FEZ1Q99689 392 aa17.56■□□□□ 0.4
CCDC6-201ENST00000263102 MINDY4BA8MYZ0 360 aa17.55■□□□□ 0.4
CCDC6-201ENST00000263102 TWISTNBQ3B726 338 aaPredicted RBP17.55■□□□□ 0.4
CCDC6-201ENST00000263102 NEK4P51957 841 aa17.55■□□□□ 0.4
CCDC6-201ENST00000263102 SLC4A8Q2Y0W8 1093 aa17.55■□□□□ 0.4
CCDC6-201ENST00000263102 METTL24Q5JXM2 366 aa17.55■□□□□ 0.4
CCDC6-201ENST00000263102 GRIPAP1Q4V328 841 aa17.55■□□□□ 0.4
CCDC6-201ENST00000263102 CAVIN4Q5BKX8 364 aa17.55■□□□□ 0.4
CCDC6-201ENST00000263102 JMYQ8N9B5 988 aa17.54■□□□□ 0.4
CCDC6-201ENST00000263102 HOMER2Q9NSB8 354 aa17.54■□□□□ 0.4
CCDC6-201ENST00000263102 CUL5Q93034 780 aa17.54■□□□□ 0.4
CCDC6-201ENST00000263102 RAPGEF2Q9Y4G8 1499 aa17.54■□□□□ 0.4
CCDC6-201ENST00000263102 C6orf229H3BNL8 230 aa17.53■□□□□ 0.4
CCDC6-201ENST00000263102 MPRIPQ6WCQ1 1025 aa17.53■□□□□ 0.4
CCDC6-201ENST00000263102 CEP126Q9P2H0 1117 aa17.53■□□□□ 0.4
CCDC6-201ENST00000263102 TAF3Q5VWG9 929 aa17.53■□□□□ 0.4
CCDC6-201ENST00000263102 CDK19Q9BWU1 502 aa17.53■□□□□ 0.4
CCDC6-201ENST00000263102 DACH1Q9UI36 760 aa17.53■□□□□ 0.4
CCDC6-201ENST00000263102 HSP90AB3PQ58FF7 597 aa17.52■□□□□ 0.4
CCDC6-201ENST00000263102 ZNF354CQ86Y25 554 aa17.52■□□□□ 0.4
CCDC6-201ENST00000263102 CCDC150Q8NCX0 1101 aa17.52■□□□□ 0.4
CCDC6-201ENST00000263102 PABPN1LA6NDY0 278 aaKnown RBP17.52■□□□□ 0.4
CCDC6-201ENST00000263102 FERMT2Q96AC1 680 aa17.52■□□□□ 0.39
CCDC6-201ENST00000263102 CYP46A1Q9Y6A2 500 aa17.52■□□□□ 0.39
CCDC6-201ENST00000263102 CEP57L1Q8IYX8 460 aa17.52■□□□□ 0.39
CCDC6-201ENST00000263102 MRPS9P82933 396 aaKnown RBP17.51■□□□□ 0.39
CCDC6-201ENST00000263102 JAKMIP3Q5VZ66 844 aa17.51■□□□□ 0.39
CCDC6-201ENST00000263102 SRCIN1Q9C0H9 1055 aa17.51■□□□□ 0.39
CCDC6-201ENST00000263102 PRDM2Q13029 1718 aa17.51■□□□□ 0.39
CCDC6-201ENST00000263102 BIN2Q9UBW5 565 aaPredicted RBP17.5■□□□□ 0.39
CCDC6-201ENST00000263102 CTNNBL1Q8WYA6 563 aaPredicted RBP17.5■□□□□ 0.39
CCDC6-201ENST00000263102 MACROD2A1Z1Q3 448 aa17.5■□□□□ 0.39
CCDC6-201ENST00000263102 EPB41L2O43491 1005 aaKnown RBP17.5■□□□□ 0.39
CCDC6-201ENST00000263102 PPP1R12BO60237 982 aaPredicted RBP17.5■□□□□ 0.39
CCDC6-201ENST00000263102 GSE1Q14687 1217 aa17.5■□□□□ 0.39
CCDC6-201ENST00000263102 PNISRQ8TF01 805 aaKnown RBP17.5■□□□□ 0.39
CCDC6-201ENST00000263102 LRRFIP2Q9Y608 721 aaKnown RBP17.5■□□□□ 0.39
CCDC6-201ENST00000263102 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms