RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 FRMPD1Q5SYB0 1578 aa10.21□□□□□ -0.77
LDB3-201ENST00000263066 INO80Q9ULG1 1556 aaPredicted RBP10.21□□□□□ -0.77
LDB3-201ENST00000263066 BANK1Q8NDB2 785 aa10.21□□□□□ -0.78
LDB3-201ENST00000263066 ZRANB1Q9UGI0 708 aa10.21□□□□□ -0.78
LDB3-201ENST00000263066 FOXD4L5Q5VV16 416 aaPredicted RBP10.21□□□□□ -0.78
LDB3-201ENST00000263066 FOXD4L4Q8WXT5 416 aaPredicted RBP10.21□□□□□ -0.78
LDB3-201ENST00000263066 ABCC1P33527 1531 aa10.21□□□□□ -0.78
LDB3-201ENST00000263066 NPHP1O15259 732 aa10.2□□□□□ -0.78
LDB3-201ENST00000263066 GOLGA6L1Q8N7Z2 621 aa10.2□□□□□ -0.78
LDB3-201ENST00000263066 BCL2L13Q9BXK5 485 aa10.2□□□□□ -0.78
LDB3-201ENST00000263066 TSPYL1Q9H0U9 437 aa10.2□□□□□ -0.78
LDB3-201ENST00000263066 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
LDB3-201ENST00000263066 DIAPH3Q9NSV4 1193 aa10.2□□□□□ -0.78
LDB3-201ENST00000263066 E9PCH4 1651 aa10.2□□□□□ -0.78
LDB3-201ENST00000263066 MTHFSP49914 203 aa10.2□□□□□ -0.78
LDB3-201ENST00000263066 NME9Q86XW9 330 aa10.2□□□□□ -0.78
LDB3-201ENST00000263066 ZNF592Q92610 1267 aa10.2□□□□□ -0.78
LDB3-201ENST00000263066 MCTP1Q6DN14 999 aa10.19□□□□□ -0.78
LDB3-201ENST00000263066 ORAI2Q96SN7 254 aa10.19□□□□□ -0.78
LDB3-201ENST00000263066 VWDEQ8N2E2 1590 aa10.19□□□□□ -0.78
LDB3-201ENST00000263066 C20orf194Q5TEA3 1177 aa10.19□□□□□ -0.78
LDB3-201ENST00000263066 USHBP1Q8N6Y0 703 aa10.19□□□□□ -0.78
LDB3-201ENST00000263066 ATP10AO60312 1499 aa10.19□□□□□ -0.78
LDB3-201ENST00000263066 GAS2L3Q86XJ1 694 aa10.18□□□□□ -0.78
LDB3-201ENST00000263066 JARID2Q92833 1246 aaPredicted RBP10.18□□□□□ -0.78
LDB3-201ENST00000263066 IFT172Q9UG01 1749 aa10.18□□□□□ -0.78
LDB3-201ENST00000263066 PRDM11Q9NQV5 511 aa10.18□□□□□ -0.78
LDB3-201ENST00000263066 PDE3BQ13370 1112 aa10.18□□□□□ -0.78
LDB3-201ENST00000263066 DRC7Q8IY82 874 aa10.18□□□□□ -0.78
LDB3-201ENST00000263066 C22orf23Q9BZE7 217 aa10.18□□□□□ -0.78
LDB3-201ENST00000263066 RTEL1-TNFRSF6BF6WH68 1400 aa10.17□□□□□ -0.78
LDB3-201ENST00000263066 DDX54Q8TDD1 881 aaKnown RBP10.17□□□□□ -0.78
LDB3-201ENST00000263066 RTF1Q92541 710 aaKnown RBP10.17□□□□□ -0.78
LDB3-201ENST00000263066 ZKSCAN5Q9Y2L8 839 aa10.17□□□□□ -0.78
LDB3-201ENST00000263066 COL17A1Q9UMD9 1497 aaPredicted RBP10.17□□□□□ -0.78
LDB3-201ENST00000263066 CGNL1Q0VF96 1302 aa10.17□□□□□ -0.78
LDB3-201ENST00000263066 IQGAP3Q86VI3 1631 aa10.17□□□□□ -0.78
LDB3-201ENST00000263066 SHANK2Q9UPX8 1470 aa10.17□□□□□ -0.78
LDB3-201ENST00000263066 CCDC61Q9Y6R9 512 aa10.17□□□□□ -0.78
LDB3-201ENST00000263066 SPATA31E1Q6ZUB1 1445 aa10.17□□□□□ -0.78
LDB3-201ENST00000263066 GTF2F1P35269 517 aaKnown RBP eCLIP10.17□□□□□ -0.78
LDB3-201ENST00000263066 CNTLNQ9NXG0 1405 aa10.17□□□□□ -0.78
LDB3-201ENST00000263066 ATP7AQ04656 1500 aa10.16□□□□□ -0.78
LDB3-201ENST00000263066 ZFYVE16Q7Z3T8 1539 aa10.16□□□□□ -0.78
LDB3-201ENST00000263066 APAF1O14727 1248 aa10.16□□□□□ -0.78
LDB3-201ENST00000263066 HSP90B1P14625 803 aaKnown RBP10.16□□□□□ -0.78
LDB3-201ENST00000263066 LOC102724159A0A0B4J2E5 919 aa10.16□□□□□ -0.78
LDB3-201ENST00000263066 PWP2Q15269 919 aaKnown RBP10.16□□□□□ -0.78
LDB3-201ENST00000263066 RALBP1Q15311 655 aa10.16□□□□□ -0.78
LDB3-201ENST00000263066 ATP2B3Q16720 1220 aa10.16□□□□□ -0.78
LDB3-201ENST00000263066 CLUAP1Q96AJ1 413 aa10.16□□□□□ -0.78
LDB3-201ENST00000263066 KIF13AQ9H1H9 1805 aa10.16□□□□□ -0.78
LDB3-201ENST00000263066 SEC24BO95487 1268 aa10.16□□□□□ -0.78
LDB3-201ENST00000263066 MROH2AA6NES4 1674 aa10.16□□□□□ -0.78
LDB3-201ENST00000263066 AXDND1Q5T1B0 1012 aaPredicted RBP10.15□□□□□ -0.78
LDB3-201ENST00000263066 ZNF335Q9H4Z2 1342 aaPredicted RBP10.15□□□□□ -0.78
LDB3-201ENST00000263066 MAP3K4Q9Y6R4 1608 aa10.15□□□□□ -0.78
LDB3-201ENST00000263066 RICTORQ6R327 1708 aa10.15□□□□□ -0.78
LDB3-201ENST00000263066 FOXD4L6Q3SYB3 417 aaPredicted RBP10.15□□□□□ -0.78
LDB3-201ENST00000263066 FOXD4L3Q6VB84 417 aaPredicted RBP10.15□□□□□ -0.78
LDB3-201ENST00000263066 TNPO1Q92973 898 aaKnown RBP10.15□□□□□ -0.78
LDB3-201ENST00000263066 RSPH14Q9UHP6 348 aa10.15□□□□□ -0.78
LDB3-201ENST00000263066 NOL7Q9UMY1 257 aaKnown RBP10.15□□□□□ -0.79
LDB3-201ENST00000263066 PHF8Q9UPP1 1060 aa10.15□□□□□ -0.79
LDB3-201ENST00000263066 UGGT1Q9NYU2 1555 aa10.15□□□□□ -0.79
LDB3-201ENST00000263066 DEF6Q9H4E7 631 aa10.14□□□□□ -0.79
LDB3-201ENST00000263066 C14orf93Q9H972 538 aaKnown RBP10.14□□□□□ -0.79
LDB3-201ENST00000263066 APBB1O00213 710 aa10.14□□□□□ -0.79
LDB3-201ENST00000263066 TOM1L2Q6ZVM7 507 aa10.14□□□□□ -0.79
LDB3-201ENST00000263066 RIMS2Q9UQ26 1411 aa10.14□□□□□ -0.79
LDB3-201ENST00000263066 GPRASP1Q5JY77 1395 aa10.14□□□□□ -0.79
LDB3-201ENST00000263066 CCDC7Q96M83 1385 aa10.14□□□□□ -0.79
LDB3-201ENST00000263066 TEX35Q5T0J7 233 aa10.13□□□□□ -0.79
LDB3-201ENST00000263066 ZNF622Q969S3 477 aaKnown RBP eCLIP10.13□□□□□ -0.79
LDB3-201ENST00000263066 FAM135AQ9P2D6 1515 aa10.13□□□□□ -0.79
LDB3-201ENST00000263066 C10orf67Q8IYJ2 551 aa10.13□□□□□ -0.79
LDB3-201ENST00000263066 MYRIPQ8NFW9 859 aa10.13□□□□□ -0.79
LDB3-201ENST00000263066 NGLY1Q96IV0 654 aa10.13□□□□□ -0.79
LDB3-201ENST00000263066 PRIMPOLQ96LW4 560 aa10.13□□□□□ -0.79
LDB3-201ENST00000263066 EMILIN1Q9Y6C2 1016 aa10.13□□□□□ -0.79
LDB3-201ENST00000263066 KDM5CP41229 1560 aa10.13□□□□□ -0.79
LDB3-201ENST00000263066 WASLO00401 505 aaPredicted RBP10.13□□□□□ -0.79
LDB3-201ENST00000263066 NPATQ14207 1427 aa10.13□□□□□ -0.79
LDB3-201ENST00000263066 TRPM1Q7Z4N2 1603 aa10.12□□□□□ -0.79
LDB3-201ENST00000263066 EIF2S2P20042 333 aaKnown RBP10.12□□□□□ -0.79
LDB3-201ENST00000263066 DUOX2Q9NRD8 1548 aa10.12□□□□□ -0.79
LDB3-201ENST00000263066 KRT28Q7Z3Y7 464 aa10.12□□□□□ -0.79
LDB3-201ENST00000263066 NLRP13Q86W25 1043 aa10.12□□□□□ -0.79
LDB3-201ENST00000263066 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
LDB3-201ENST00000263066 PNISRQ8TF01 805 aaKnown RBP10.11□□□□□ -0.79
LDB3-201ENST00000263066 RPRD2Q5VT52 1461 aaKnown RBP10.11□□□□□ -0.79
LDB3-201ENST00000263066 PRPF40AO75400 957 aaKnown RBP10.11□□□□□ -0.79
LDB3-201ENST00000263066 C8orf37Q96NL8 207 aa10.11□□□□□ -0.79
LDB3-201ENST00000263066 NEO1Q92859 1461 aa10.11□□□□□ -0.79
LDB3-201ENST00000263066 OS9Q13438 667 aaPredicted RBP10.11□□□□□ -0.79
LDB3-201ENST00000263066 ACEP12821 1306 aa10.11□□□□□ -0.79
LDB3-201ENST00000263066 RPGRIP1LQ68CZ1 1315 aa10.11□□□□□ -0.79
LDB3-201ENST00000263066 DIAPH1O60610 1272 aaKnown RBP10.1□□□□□ -0.79
LDB3-201ENST00000263066 MCM5P33992 734 aa10.1□□□□□ -0.79
LDB3-201ENST00000263066 TDO2P48775 406 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms