RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 TRAK1Q9UPV9 953 aa20.24■□□□□ 0.83
VSX2-201ENST00000261980 NUCB2P80303 420 aa20.24■□□□□ 0.83
VSX2-201ENST00000261980 INO80Q9ULG1 1556 aaPredicted RBP20.23■□□□□ 0.83
VSX2-201ENST00000261980 STAC3Q96MF2 364 aa20.23■□□□□ 0.83
VSX2-201ENST00000261980 CHGAP10645 457 aaKnown RBP20.22■□□□□ 0.83
VSX2-201ENST00000261980 SAFB2Q14151 953 aaKnown RBP eCLIP20.22■□□□□ 0.83
VSX2-201ENST00000261980 OTUD7AQ8TE49 926 aaPredicted RBP20.22■□□□□ 0.83
VSX2-201ENST00000261980 ZMYM3Q14202 1370 aa20.22■□□□□ 0.83
VSX2-201ENST00000261980 POGZQ7Z3K3 1410 aa20.22■□□□□ 0.83
VSX2-201ENST00000261980 KIF13AQ9H1H9 1805 aa20.22■□□□□ 0.83
VSX2-201ENST00000261980 GSPT1P15170 499 aaKnown RBP20.22■□□□□ 0.83
VSX2-201ENST00000261980 NOLC1Q14978 699 aaKnown RBP eCLIP20.21■□□□□ 0.83
VSX2-201ENST00000261980 BCL2L12Q9HB09 334 aa20.21■□□□□ 0.83
VSX2-201ENST00000261980 NGEFQ8N5V2 710 aa20.21■□□□□ 0.83
VSX2-201ENST00000261980 THUMPD2Q9BTF0 503 aaKnown RBP20.21■□□□□ 0.83
VSX2-201ENST00000261980 IQGAP3Q86VI3 1631 aa20.21■□□□□ 0.83
VSX2-201ENST00000261980 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
VSX2-201ENST00000261980 ZNF771Q7L3S4 317 aaPredicted RBP20.2■□□□□ 0.82
VSX2-201ENST00000261980 KIDINS220Q9ULH0 1771 aa20.2■□□□□ 0.82
VSX2-201ENST00000261980 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
VSX2-201ENST00000261980 KIF3AQ9Y496 699 aa20.2■□□□□ 0.82
VSX2-201ENST00000261980 KANK1Q14678 1352 aa20.19■□□□□ 0.82
VSX2-201ENST00000261980 IBTKQ9P2D0 1353 aaPredicted RBP20.19■□□□□ 0.82
VSX2-201ENST00000261980 CDC45O75419 566 aa20.19■□□□□ 0.82
VSX2-201ENST00000261980 UTP14CQ5TAP6 766 aaKnown RBP20.19■□□□□ 0.82
VSX2-201ENST00000261980 PDCL2Q8N4E4 241 aa20.19■□□□□ 0.82
VSX2-201ENST00000261980 GADD45BO75293 160 aaPredicted RBP20.18■□□□□ 0.82
VSX2-201ENST00000261980 SPC24Q8NBT2 197 aa20.18■□□□□ 0.82
VSX2-201ENST00000261980 SMARCA5O60264 1052 aaPredicted RBP20.18■□□□□ 0.82
VSX2-201ENST00000261980 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
VSX2-201ENST00000261980 TSPY26PQ9H489 355 aa20.18■□□□□ 0.82
VSX2-201ENST00000261980 POLR3AO14802 1390 aaPredicted RBP20.17■□□□□ 0.82
VSX2-201ENST00000261980 SIRT2Q8IXJ6 389 aa20.16■□□□□ 0.82
VSX2-201ENST00000261980 NAP1L2Q9ULW6 460 aaPredicted RBP20.16■□□□□ 0.82
VSX2-201ENST00000261980 RABEP1Q15276 862 aa20.16■□□□□ 0.82
VSX2-201ENST00000261980 CYP2E1P05181 493 aaPredicted RBP20.15■□□□□ 0.82
VSX2-201ENST00000261980 TMPOP42166 694 aaKnown RBP20.15■□□□□ 0.82
VSX2-201ENST00000261980 TMEM132EQ6IEE7 984 aa20.15■□□□□ 0.82
VSX2-201ENST00000261980 HCLS1P14317 486 aaPredicted RBP20.14■□□□□ 0.82
VSX2-201ENST00000261980 MCM5P33992 734 aa20.14■□□□□ 0.82
VSX2-201ENST00000261980 CLEC17AQ6ZS10 378 aa20.14■□□□□ 0.82
VSX2-201ENST00000261980 ADCY5O95622 1261 aa20.14■□□□□ 0.81
VSX2-201ENST00000261980 NUTM2DQ5VT03 806 aaPredicted RBP20.14■□□□□ 0.81
VSX2-201ENST00000261980 TRIM35Q9UPQ4 493 aa20.14■□□□□ 0.81
VSX2-201ENST00000261980 SCAF11Q99590 1463 aaKnown RBP20.13■□□□□ 0.81
VSX2-201ENST00000261980 ADGRF5Q8IZF2 1346 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 NEO1Q92859 1461 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 IPO8O15397 1037 aaKnown RBP20.13■□□□□ 0.81
VSX2-201ENST00000261980 FBLN1P23142 703 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 NEK4P51957 841 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 NAA30Q147X3 362 aaPredicted RBP20.13■□□□□ 0.81
VSX2-201ENST00000261980 YEATS2Q9ULM3 1422 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 TSHZ3Q63HK5 1081 aa20.13■□□□□ 0.81
VSX2-201ENST00000261980 CFAP74Q9C0B2 1584 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 RIOK3O14730 519 aaKnown RBP20.12■□□□□ 0.81
VSX2-201ENST00000261980 ST18O60284 1047 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 TRERF1Q96PN7 1200 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 USP26Q9BXU7 913 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 GGNBP2Q9H3C7 697 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 PPIP5K1Q6PFW1 1433 aa20.12■□□□□ 0.81
VSX2-201ENST00000261980 CFAP65Q6ZU64 1925 aaKnown RBP20.11■□□□□ 0.81
VSX2-201ENST00000261980 LARP6Q9BRS8 491 aaKnown RBP20.11■□□□□ 0.81
VSX2-201ENST00000261980 TMEM51Q9NW97 253 aa20.11■□□□□ 0.81
VSX2-201ENST00000261980 TSPYL6Q8N831 410 aa20.11■□□□□ 0.81
VSX2-201ENST00000261980 PIBF1Q8WXW3 757 aa20.1■□□□□ 0.81
VSX2-201ENST00000261980 MLH3Q9UHC1 1453 aa20.1■□□□□ 0.81
VSX2-201ENST00000261980 GTPBP4Q9BZE4 634 aaKnown RBP20.1■□□□□ 0.81
VSX2-201ENST00000261980 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
VSX2-201ENST00000261980 ZBTB7BO15156 539 aaPredicted RBP20.1■□□□□ 0.81
VSX2-201ENST00000261980 ATP10AO60312 1499 aa20.09■□□□□ 0.81
VSX2-201ENST00000261980 SYNMO15061 1565 aa20.09■□□□□ 0.81
VSX2-201ENST00000261980 MAP3K4Q9Y6R4 1608 aa20.09■□□□□ 0.81
VSX2-201ENST00000261980 HECW2Q9P2P5 1572 aa20.09■□□□□ 0.81
VSX2-201ENST00000261980 PLEKHM2Q8IWE5 1019 aa20.09■□□□□ 0.81
VSX2-201ENST00000261980 PYCARDQ9ULZ3 195 aa20.08■□□□□ 0.81
VSX2-201ENST00000261980 CDK11BP21127 795 aaKnown RBP20.08■□□□□ 0.8
VSX2-201ENST00000261980 KIF20AO95235 890 aa20.07■□□□□ 0.8
VSX2-201ENST00000261980 CHMP3Q9Y3E7 222 aa20.07■□□□□ 0.8
VSX2-201ENST00000261980 LETM1O95202 739 aaPredicted RBP20.07■□□□□ 0.8
VSX2-201ENST00000261980 HMGN5P82970 282 aaKnown RBP20.07■□□□□ 0.8
VSX2-201ENST00000261980 UPF3BQ9BZI7 483 aaKnown RBP20.07■□□□□ 0.8
VSX2-201ENST00000261980 PPRC1Q5VV67 1664 aaKnown RBP20.07■□□□□ 0.8
VSX2-201ENST00000261980 ERICH4A6NGS2 130 aa20.07■□□□□ 0.8
VSX2-201ENST00000261980 CCDC27Q2M243 656 aa20.07■□□□□ 0.8
VSX2-201ENST00000261980 PRIMPOLQ96LW4 560 aa20.07■□□□□ 0.8
VSX2-201ENST00000261980 ABCA6Q8N139 1617 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 GCC1Q96CN9 775 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 MROH1Q8NDA8 1641 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 SDSP20132 328 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
VSX2-201ENST00000261980 TMX3Q96JJ7 454 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 CHMP4AQ9BY43 222 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 FRMPD1Q5SYB0 1578 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 UGGT1Q9NYU2 1555 aa20.06■□□□□ 0.8
VSX2-201ENST00000261980 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
VSX2-201ENST00000261980 KCNJ4P48050 445 aa20.04■□□□□ 0.8
VSX2-201ENST00000261980 USP48Q86UV5 1035 aa20.04■□□□□ 0.8
VSX2-201ENST00000261980 ERVK-7P63135 1459 aa20.04■□□□□ 0.8
VSX2-201ENST00000261980 CWC22Q9HCG8 908 aaKnown RBP20.04■□□□□ 0.8
VSX2-201ENST00000261980 CABP2Q9NPB3 220 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms