RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 WASHC2AQ641Q2 1341 aa16■□□□□ 0.15
PFDN1-201ENST00000261813 TTC21AQ8NDW8 1320 aa16■□□□□ 0.15
PFDN1-201ENST00000261813 CD44P16070 742 aaKnown RBP16■□□□□ 0.15
PFDN1-201ENST00000261813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.99■□□□□ 0.151e-6■■□□□ 12
PFDN1-201ENST00000261813 CDK12Q9NYV4 1490 aaPredicted RBP15.98■□□□□ 0.15
PFDN1-201ENST00000261813 AFF2P51816 1311 aa15.98■□□□□ 0.15
PFDN1-201ENST00000261813 PHRF1Q9P1Y6 1649 aaKnown RBP15.98■□□□□ 0.15
PFDN1-201ENST00000261813 CARD14Q9BXL6 1004 aa15.98■□□□□ 0.15
PFDN1-201ENST00000261813 USP19O94966 1318 aa15.97■□□□□ 0.15
PFDN1-201ENST00000261813 MARF1Q9Y4F3 1742 aaKnown RBP15.97■□□□□ 0.15
PFDN1-201ENST00000261813 ADAMTS2O95450 1211 aa15.97■□□□□ 0.15
PFDN1-201ENST00000261813 NME9Q86XW9 330 aa15.97■□□□□ 0.15
PFDN1-201ENST00000261813 ZRANB1Q9UGI0 708 aa15.97■□□□□ 0.15
PFDN1-201ENST00000261813 USP31Q70CQ4 1352 aa15.96■□□□□ 0.15
PFDN1-201ENST00000261813 NLRP6P59044 892 aa15.96■□□□□ 0.15
PFDN1-201ENST00000261813 NLRP13Q86W25 1043 aa15.96■□□□□ 0.15
PFDN1-201ENST00000261813 NSD3Q9BZ95 1437 aa15.95■□□□□ 0.14
PFDN1-201ENST00000261813 C8orf37Q96NL8 207 aa15.95■□□□□ 0.14
PFDN1-201ENST00000261813 PANK3Q9H999 370 aa15.95■□□□□ 0.14
PFDN1-201ENST00000261813 SLIT3O75094 1523 aa15.95■□□□□ 0.14
PFDN1-201ENST00000261813 USP54Q70EL1 1684 aa15.94■□□□□ 0.14
PFDN1-201ENST00000261813 HAP1P54257 671 aaPredicted RBP15.94■□□□□ 0.14
PFDN1-201ENST00000261813 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
PFDN1-201ENST00000261813 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
PFDN1-201ENST00000261813 QTRT2Q9H974 415 aaKnown RBP15.93■□□□□ 0.14
PFDN1-201ENST00000261813 RBM6P78332 1123 aaKnown RBP15.92■□□□□ 0.14
PFDN1-201ENST00000261813 FYB1O15117 783 aa15.91■□□□□ 0.14
PFDN1-201ENST00000261813 GCP02774 474 aa15.91■□□□□ 0.14
PFDN1-201ENST00000261813 NGLY1Q96IV0 654 aa15.9■□□□□ 0.14
PFDN1-201ENST00000261813 GGNBP2Q9H3C7 697 aa15.9■□□□□ 0.14
PFDN1-201ENST00000261813 KIAA0232Q92628 1395 aa15.9■□□□□ 0.14
PFDN1-201ENST00000261813 KIF20BQ96Q89 1820 aa15.9■□□□□ 0.14
PFDN1-201ENST00000261813 ZC3H6P61129 1189 aaKnown RBP15.89■□□□□ 0.13
PFDN1-201ENST00000261813 NFAT5O94916 1531 aa15.89■□□□□ 0.13
PFDN1-201ENST00000261813 FAM83GA6ND36 823 aa15.88■□□□□ 0.13
PFDN1-201ENST00000261813 NUBP1P53384 320 aa15.88■□□□□ 0.13
PFDN1-201ENST00000261813 IFNLR1Q8IU57 520 aaPredicted RBP15.88■□□□□ 0.13
PFDN1-201ENST00000261813 CPDO75976 1380 aa15.88■□□□□ 0.13
PFDN1-201ENST00000261813 SLIT2O94813 1529 aa15.88■□□□□ 0.13
PFDN1-201ENST00000261813 SOX12O15370 315 aa15.87■□□□□ 0.13
PFDN1-201ENST00000261813 FNBP4Q8N3X1 1017 aaPredicted RBP15.87■□□□□ 0.13
PFDN1-201ENST00000261813 KCNH5Q8NCM2 988 aa15.87■□□□□ 0.13
PFDN1-201ENST00000261813 COG3Q96JB2 828 aa15.87■□□□□ 0.13
PFDN1-201ENST00000261813 PLCH1Q4KWH8 1693 aa15.87■□□□□ 0.13
PFDN1-201ENST00000261813 COL14A1Q05707 1796 aaKnown RBP15.87■□□□□ 0.13
PFDN1-201ENST00000261813 PER1O15534 1290 aaPredicted RBP15.87■□□□□ 0.13
PFDN1-201ENST00000261813 PRDM11Q9NQV5 511 aa15.87■□□□□ 0.13
PFDN1-201ENST00000261813 CGNL1Q0VF96 1302 aa15.86■□□□□ 0.13
PFDN1-201ENST00000261813 RGS12O14924 1447 aa15.86■□□□□ 0.13
PFDN1-201ENST00000261813 CHRNA2Q15822 529 aa15.86■□□□□ 0.13
PFDN1-201ENST00000261813 ZNF579Q8NAF0 562 aaKnown RBP15.86■□□□□ 0.13
PFDN1-201ENST00000261813 BCL9LQ86UU0 1499 aa15.85■□□□□ 0.13
PFDN1-201ENST00000261813 RASEFQ8IZ41 740 aa15.85■□□□□ 0.13
PFDN1-201ENST00000261813 LMO7Q8WWI1 1683 aa15.84■□□□□ 0.13
PFDN1-201ENST00000261813 AMER1Q5JTC6 1135 aaPredicted RBP15.84■□□□□ 0.13
PFDN1-201ENST00000261813 ARHGEF25Q86VW2 580 aa15.84■□□□□ 0.13
PFDN1-201ENST00000261813 USP21Q9UK80 565 aa15.84■□□□□ 0.13
PFDN1-201ENST00000261813 KNSTRNQ9Y448 316 aa15.84■□□□□ 0.13
PFDN1-201ENST00000261813 NWD2Q9ULI1 1742 aa15.83■□□□□ 0.13
PFDN1-201ENST00000261813 ZBTB7CA1YPR0 619 aa15.83■□□□□ 0.12
PFDN1-201ENST00000261813 FBLN1P23142 703 aa15.83■□□□□ 0.12
PFDN1-201ENST00000261813 BTG4Q9NY30 223 aa15.83■□□□□ 0.12
PFDN1-201ENST00000261813 TRPC5Q9UL62 973 aaPredicted RBP15.83■□□□□ 0.12
PFDN1-201ENST00000261813 NRAPQ86VF7 1730 aa15.83■□□□□ 0.12
PFDN1-201ENST00000261813 ANKRD26Q9UPS8 1709 aa15.83■□□□□ 0.12
PFDN1-201ENST00000261813 NSD2O96028 1365 aa15.82■□□□□ 0.12
PFDN1-201ENST00000261813 COL18A1P39060 1754 aa15.82■□□□□ 0.12
PFDN1-201ENST00000261813 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.82■□□□□ 0.12
PFDN1-201ENST00000261813 CAMTA1Q9Y6Y1 1673 aa15.82■□□□□ 0.12
PFDN1-201ENST00000261813 AATKQ6ZMQ8 1374 aa15.81■□□□□ 0.12
PFDN1-201ENST00000261813 UNC5CLQ8IV45 518 aa15.81■□□□□ 0.12
PFDN1-201ENST00000261813 ATRNO75882 1429 aa15.81■□□□□ 0.12
PFDN1-201ENST00000261813 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
PFDN1-201ENST00000261813 LTN1O94822 1766 aa15.8■□□□□ 0.12
PFDN1-201ENST00000261813 MAP3K19Q56UN5 1328 aa15.79■□□□□ 0.12
PFDN1-201ENST00000261813 ABCC6O95255 1503 aa15.79■□□□□ 0.12
PFDN1-201ENST00000261813 AXIN2Q9Y2T1 843 aa15.79■□□□□ 0.12
PFDN1-201ENST00000261813 COL5A2P05997 1499 aaPredicted RBP15.78■□□□□ 0.12
PFDN1-201ENST00000261813 DDX10Q13206 875 aaKnown RBP15.78■□□□□ 0.12
PFDN1-201ENST00000261813 RRS1Q15050 365 aaKnown RBP15.78■□□□□ 0.12
PFDN1-201ENST00000261813 NPC1L1Q9UHC9 1359 aa15.78■□□□□ 0.12
PFDN1-201ENST00000261813 CLCN6P51797 869 aa15.77■□□□□ 0.12
PFDN1-201ENST00000261813 VPS72Q15906 364 aa15.76■□□□□ 0.11
PFDN1-201ENST00000261813 CC2D1BQ5T0F9 858 aaKnown RBP15.76■□□□□ 0.11
PFDN1-201ENST00000261813 DIEXFQ68CQ4 756 aaKnown RBP15.76■□□□□ 0.11
PFDN1-201ENST00000261813 MORC1Q86VD1 984 aa15.76■□□□□ 0.11
PFDN1-201ENST00000261813 STRN4Q9NRL3 753 aa15.76■□□□□ 0.11
PFDN1-201ENST00000261813 PEAK1Q9H792 1746 aa15.76■□□□□ 0.11
PFDN1-201ENST00000261813 TNNT2P45379 298 aaPredicted RBP15.75■□□□□ 0.11
PFDN1-201ENST00000261813 TSPYL2Q9H2G4 693 aaPredicted RBP15.75■□□□□ 0.11
PFDN1-201ENST00000261813 RGPD5Q99666 1765 aa15.75■□□□□ 0.11
PFDN1-201ENST00000261813 GLI3P10071 1580 aa15.75■□□□□ 0.11
PFDN1-201ENST00000261813 HOXC9P31274 260 aa15.75■□□□□ 0.11
PFDN1-201ENST00000261813 CCDC125Q86Z20 511 aa15.75■□□□□ 0.11
PFDN1-201ENST00000261813 IP6K1Q92551 441 aa15.75■□□□□ 0.11
PFDN1-201ENST00000261813 EMILIN1Q9Y6C2 1016 aa15.75■□□□□ 0.11
PFDN1-201ENST00000261813 RTL1A6NKG5 1358 aa15.74■□□□□ 0.11
PFDN1-201ENST00000261813 GABBR2O75899 941 aa15.74■□□□□ 0.11
PFDN1-201ENST00000261813 AMPHP49418 695 aa15.74■□□□□ 0.11
PFDN1-201ENST00000261813 EVA1CP58658 441 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms