RNA–Protein interactions for RNA: ENST00000261427.9

UBE2K-201, Transcript of ubiquitin conjugating enzyme E2 K, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2K, Length 5,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2K-201ENST00000261427 CAVIN1Q6NZI2 390 aaKnown RBP23.66■■□□□ 1.38
UBE2K-201ENST00000261427 RNF214Q8ND24 703 aa23.65■■□□□ 1.38
UBE2K-201ENST00000261427 TSPY26PQ9H489 355 aa23.65■■□□□ 1.38
UBE2K-201ENST00000261427 MVPQ14764 893 aaKnown RBP23.65■■□□□ 1.38
UBE2K-201ENST00000261427 NBPF8Q3BBV2 869 aa23.65■■□□□ 1.38
UBE2K-201ENST00000261427 BCAR3O75815 825 aa23.65■■□□□ 1.38
UBE2K-201ENST00000261427 DDX54Q8TDD1 881 aaKnown RBP23.64■■□□□ 1.38
UBE2K-201ENST00000261427 MPHOSPH8Q99549 860 aa23.64■■□□□ 1.38
UBE2K-201ENST00000261427 HECW1Q76N89 1606 aa23.64■■□□□ 1.38
UBE2K-201ENST00000261427 ERCC4Q92889 916 aaPredicted RBP23.64■■□□□ 1.38
UBE2K-201ENST00000261427 MYO6Q9UM54 1294 aa23.64■■□□□ 1.38
UBE2K-201ENST00000261427 ZFYVE27Q5T4F4 411 aa23.64■■□□□ 1.37
UBE2K-201ENST00000261427 PHF23Q9BUL5 403 aaPredicted RBP23.64■■□□□ 1.37
UBE2K-201ENST00000261427 PRPF40AO75400 957 aaKnown RBP23.63■■□□□ 1.37
UBE2K-201ENST00000261427 CAGE1Q8TC20 777 aa23.63■■□□□ 1.37
UBE2K-201ENST00000261427 HMGB2P26583 209 aaKnown RBP23.63■■□□□ 1.37
UBE2K-201ENST00000261427 PRDM11Q9NQV5 511 aa23.63■■□□□ 1.37
UBE2K-201ENST00000261427 KRT18P05783 430 aaKnown RBP23.62■■□□□ 1.37
UBE2K-201ENST00000261427 FIBPO43427 364 aa23.62■■□□□ 1.37
UBE2K-201ENST00000261427 SMC2O95347 1197 aa23.62■■□□□ 1.37
UBE2K-201ENST00000261427 KDM4AO75164 1064 aa23.62■■□□□ 1.37
UBE2K-201ENST00000261427 HSP90AB2PQ58FF8 381 aa23.62■■□□□ 1.37
UBE2K-201ENST00000261427 WDR33Q9C0J8 1336 aaKnown RBP23.62■■□□□ 1.37
UBE2K-201ENST00000261427 DCAF8L1A6NGE4 600 aa23.61■■□□□ 1.37
UBE2K-201ENST00000261427 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.61■■□□□ 1.379e-7■■■■■ 78.4
UBE2K-201ENST00000261427 WWC2Q6AWC2 1192 aa23.6■■□□□ 1.37
UBE2K-201ENST00000261427 RPAP2Q8IXW5 612 aaPredicted RBP23.6■■□□□ 1.37
UBE2K-201ENST00000261427 SIL1Q9H173 461 aa23.6■■□□□ 1.37
UBE2K-201ENST00000261427 CTNNA3Q9UI47 895 aa23.6■■□□□ 1.37
UBE2K-201ENST00000261427 CEP126Q9P2H0 1117 aa23.6■■□□□ 1.37
UBE2K-201ENST00000261427 DACH1Q9UI36 760 aa23.59■■□□□ 1.37
UBE2K-201ENST00000261427 DAPK1P53355 1430 aa23.59■■□□□ 1.37
UBE2K-201ENST00000261427 CCDC69A6NI79 296 aa23.59■■□□□ 1.37
UBE2K-201ENST00000261427 SLC26A8Q96RN1 970 aa23.58■■□□□ 1.37
UBE2K-201ENST00000261427 SRGAP3O43295 1099 aa23.58■■□□□ 1.37
UBE2K-201ENST00000261427 CHD1LQ86WJ1 897 aa23.58■■□□□ 1.37
UBE2K-201ENST00000261427 BTBD11A6QL63 1104 aa23.58■■□□□ 1.37
UBE2K-201ENST00000261427 PATL2C9JE40 543 aaKnown RBP23.58■■□□□ 1.37
UBE2K-201ENST00000261427 CDKL5O76039 1030 aa23.58■■□□□ 1.37
UBE2K-201ENST00000261427 SF3B2Q13435 895 aaKnown RBP23.58■■□□□ 1.37
UBE2K-201ENST00000261427 KRI1Q8N9T8 703 aaKnown RBP23.58■■□□□ 1.37
UBE2K-201ENST00000261427 FMNL2Q96PY5 1086 aa23.58■■□□□ 1.37
UBE2K-201ENST00000261427 MYL6BP14649 208 aa23.58■■□□□ 1.36
UBE2K-201ENST00000261427 TMEM132AQ24JP5 1023 aa23.58■■□□□ 1.36
UBE2K-201ENST00000261427 PDIA4P13667 645 aaKnown RBP23.57■■□□□ 1.36
UBE2K-201ENST00000261427 CCDC61Q9Y6R9 512 aa23.57■■□□□ 1.36
UBE2K-201ENST00000261427 PRXQ9BXM0 1461 aa23.57■■□□□ 1.36
UBE2K-201ENST00000261427 KRT85P78386 507 aa23.57■■□□□ 1.36
UBE2K-201ENST00000261427 KCNH5Q8NCM2 988 aa23.57■■□□□ 1.36
UBE2K-201ENST00000261427 STIM1Q13586 685 aa23.57■■□□□ 1.36
UBE2K-201ENST00000261427 SYCP1Q15431 976 aa23.57■■□□□ 1.36
UBE2K-201ENST00000261427 AACSQ86V21 672 aa23.57■■□□□ 1.36
UBE2K-201ENST00000261427 KRT32Q14532 448 aa23.57■■□□□ 1.36
UBE2K-201ENST00000261427 NFE2L2Q16236 605 aa23.57■■□□□ 1.36
UBE2K-201ENST00000261427 ZSCAN31Q96LW9 406 aaPredicted RBP23.57■■□□□ 1.36
UBE2K-201ENST00000261427 ZNHIT6Q9NWK9 470 aaKnown RBP23.57■■□□□ 1.36
UBE2K-201ENST00000261427 K7ELQ4 463 aaPredicted RBP23.56■■□□□ 1.36
UBE2K-201ENST00000261427 SOGA3Q5TF21 947 aa23.56■■□□□ 1.36
UBE2K-201ENST00000261427 BLOC1S2Q6QNY1 142 aa23.56■■□□□ 1.36
UBE2K-201ENST00000261427 MTERF4Q7Z6M4 381 aaKnown RBP23.56■■□□□ 1.36
UBE2K-201ENST00000261427 CCDC192P0DO97 292 aa23.56■■□□□ 1.36
UBE2K-201ENST00000261427 NOL7Q9UMY1 257 aaKnown RBP23.56■■□□□ 1.36
UBE2K-201ENST00000261427 RAPGEF3O95398 923 aa23.55■■□□□ 1.36
UBE2K-201ENST00000261427 TOPBP1Q92547 1522 aa23.55■■□□□ 1.36
UBE2K-201ENST00000261427 LUC7LQ9NQ29 371 aaKnown RBP23.55■■□□□ 1.36
UBE2K-201ENST00000261427 SYNJ1O43426 1573 aa23.54■■□□□ 1.36
UBE2K-201ENST00000261427 ATP2B2Q01814 1243 aa23.54■■□□□ 1.36
UBE2K-201ENST00000261427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.54■■□□□ 1.362e-8■□□□□ 11
UBE2K-201ENST00000261427 CEBPZQ03701 1054 aaKnown RBP23.54■■□□□ 1.36
UBE2K-201ENST00000261427 ME1P48163 572 aa23.53■■□□□ 1.36
UBE2K-201ENST00000261427 LARP1BQ659C4 914 aaKnown RBP23.53■■□□□ 1.36
UBE2K-201ENST00000261427 RRS1Q15050 365 aaKnown RBP23.53■■□□□ 1.36
UBE2K-201ENST00000261427 FKBP4Q02790 459 aaKnown RBP eCLIP23.53■■□□□ 1.36
UBE2K-201ENST00000261427 NUDT16Q96DE0 195 aaKnown RBP23.53■■□□□ 1.36
UBE2K-201ENST00000261427 SNAPC4Q5SXM2 1469 aa23.53■■□□□ 1.36
UBE2K-201ENST00000261427 GNAT3A8MTJ3 354 aa23.52■■□□□ 1.36
UBE2K-201ENST00000261427 DCTN1Q14203 1278 aa23.52■■□□□ 1.36
UBE2K-201ENST00000261427 TTLL5Q6EMB2 1281 aa23.52■■□□□ 1.36
UBE2K-201ENST00000261427 TXLNBQ8N3L3 684 aa23.52■■□□□ 1.36
UBE2K-201ENST00000261427 NUTM2BA6NNL0 878 aaPredicted RBP23.51■■□□□ 1.35
UBE2K-201ENST00000261427 NUTM2EB1AL46 878 aaPredicted RBP23.51■■□□□ 1.35
UBE2K-201ENST00000261427 STK3Q13188 491 aa23.51■■□□□ 1.35
UBE2K-201ENST00000261427 NUTM2AQ8IVF1 878 aaPredicted RBP23.51■■□□□ 1.35
UBE2K-201ENST00000261427 BRPF1P55201 1214 aaPredicted RBP23.51■■□□□ 1.35
UBE2K-201ENST00000261427 HMGN5P82970 282 aaKnown RBP23.51■■□□□ 1.35
UBE2K-201ENST00000261427 MAP7D2Q96T17 732 aa23.51■■□□□ 1.35
UBE2K-201ENST00000261427 TNMDQ9H2S6 317 aa23.51■■□□□ 1.35
UBE2K-201ENST00000261427 TIAM1Q13009 1591 aa23.51■■□□□ 1.35
UBE2K-201ENST00000261427 SERPINC1P01008 464 aa23.51■■□□□ 1.35
UBE2K-201ENST00000261427 NOM1Q5C9Z4 860 aaKnown RBP23.5■■□□□ 1.35
UBE2K-201ENST00000261427 UBAC1Q9BSL1 405 aa23.5■■□□□ 1.35
UBE2K-201ENST00000261427 BACH2Q9BYV9 841 aa23.5■■□□□ 1.35
UBE2K-201ENST00000261427 POLA1P09884 1462 aaPredicted RBP23.5■■□□□ 1.35
UBE2K-201ENST00000261427 STARD3NLO95772 234 aa23.5■■□□□ 1.35
UBE2K-201ENST00000261427 TMPOP42166 694 aaKnown RBP23.5■■□□□ 1.35
UBE2K-201ENST00000261427 NUP133Q8WUM0 1156 aa23.5■■□□□ 1.35
UBE2K-201ENST00000261427 PDRG1Q9NUG6 133 aa23.5■■□□□ 1.35
UBE2K-201ENST00000261427 CIZ1Q9ULV3 898 aaPredicted RBP23.5■■□□□ 1.35
UBE2K-201ENST00000261427 CFAP45Q9UL16 551 aa23.49■■□□□ 1.35
UBE2K-201ENST00000261427 NSD3Q9BZ95 1437 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms