RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 SIRT2Q8IXJ6 389 aa16.23■□□□□ 0.19
TUBGCP4-201ENST00000260383 TAF3Q5VWG9 929 aa16.23■□□□□ 0.19
TUBGCP4-201ENST00000260383 GCC1Q96CN9 775 aa16.23■□□□□ 0.19
TUBGCP4-201ENST00000260383 NSD3Q9BZ95 1437 aa16.22■□□□□ 0.19
TUBGCP4-201ENST00000260383 ADCY5O95622 1261 aa16.22■□□□□ 0.19
TUBGCP4-201ENST00000260383 FOXD4L6Q3SYB3 417 aaPredicted RBP16.22■□□□□ 0.19
TUBGCP4-201ENST00000260383 FOXD4L3Q6VB84 417 aaPredicted RBP16.22■□□□□ 0.19
TUBGCP4-201ENST00000260383 ZBTB7BO15156 539 aaPredicted RBP16.21■□□□□ 0.19
TUBGCP4-201ENST00000260383 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
TUBGCP4-201ENST00000260383 TRIM35Q9UPQ4 493 aa16.21■□□□□ 0.19
TUBGCP4-201ENST00000260383 ZNF518AQ6AHZ1 1483 aa16.21■□□□□ 0.19
TUBGCP4-201ENST00000260383 GADD45BO75293 160 aaPredicted RBP16.21■□□□□ 0.19
TUBGCP4-201ENST00000260383 IQGAP3Q86VI3 1631 aa16.21■□□□□ 0.19
TUBGCP4-201ENST00000260383 ERCC6L2Q5T890 1561 aa16.21■□□□□ 0.19
TUBGCP4-201ENST00000260383 GDPD2Q9HCC8 539 aa16.2■□□□□ 0.18
TUBGCP4-201ENST00000260383 IPO8O15397 1037 aaKnown RBP16.2■□□□□ 0.18
TUBGCP4-201ENST00000260383 CFAP70Q5T0N1 1121 aa16.2■□□□□ 0.18
TUBGCP4-201ENST00000260383 SLC12A5Q9H2X9 1139 aa16.2■□□□□ 0.18
TUBGCP4-201ENST00000260383 IRX5P78411 483 aaPredicted RBP16.19■□□□□ 0.18
TUBGCP4-201ENST00000260383 TTC37Q6PGP7 1564 aa16.19■□□□□ 0.18
TUBGCP4-201ENST00000260383 ATP10BO94823 1461 aa16.19■□□□□ 0.18
TUBGCP4-201ENST00000260383 ST18O60284 1047 aa16.19■□□□□ 0.18
TUBGCP4-201ENST00000260383 PYCARDQ9ULZ3 195 aa16.19■□□□□ 0.18
TUBGCP4-201ENST00000260383 CD109Q6YHK3 1445 aa16.19■□□□□ 0.18
TUBGCP4-201ENST00000260383 SAMD9LQ8IVG5 1584 aa16.19■□□□□ 0.18
TUBGCP4-201ENST00000260383 PLEKHM2Q8IWE5 1019 aa16.18■□□□□ 0.18
TUBGCP4-201ENST00000260383 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
TUBGCP4-201ENST00000260383 CFAP53Q96M91 514 aa16.18■□□□□ 0.18
TUBGCP4-201ENST00000260383 CTIFO43310 598 aaKnown RBP16.18■□□□□ 0.18
TUBGCP4-201ENST00000260383 OGFRQ9NZT2 677 aa16.18■□□□□ 0.18
TUBGCP4-201ENST00000260383 SMARCA5O60264 1052 aaPredicted RBP16.17■□□□□ 0.18
TUBGCP4-201ENST00000260383 SLFN14P0C7P3 912 aa16.17■□□□□ 0.18
TUBGCP4-201ENST00000260383 TMPOP42166 694 aaKnown RBP16.17■□□□□ 0.18
TUBGCP4-201ENST00000260383 KCNJ4P48050 445 aa16.17■□□□□ 0.18
TUBGCP4-201ENST00000260383 FEZ1Q99689 392 aa16.17■□□□□ 0.18
TUBGCP4-201ENST00000260383 KIAA1524Q8TCG1 905 aa16.17■□□□□ 0.18
TUBGCP4-201ENST00000260383 KCNF1Q9H3M0 494 aa16.17■□□□□ 0.18
TUBGCP4-201ENST00000260383 TPRNQ4KMQ1 711 aa16.16■□□□□ 0.18
TUBGCP4-201ENST00000260383 BRD1O95696 1058 aa16.16■□□□□ 0.18
TUBGCP4-201ENST00000260383 HCLS1P14317 486 aaPredicted RBP16.16■□□□□ 0.18
TUBGCP4-201ENST00000260383 CDK11BP21127 795 aaKnown RBP16.16■□□□□ 0.18
TUBGCP4-201ENST00000260383 NCBP1Q09161 790 aaKnown RBP16.16■□□□□ 0.18
TUBGCP4-201ENST00000260383 DIAPH3Q9NSV4 1193 aa16.16■□□□□ 0.18
TUBGCP4-201ENST00000260383 ABCC11Q96J66 1382 aa16.16■□□□□ 0.18
TUBGCP4-201ENST00000260383 UVSSAQ2YD98 709 aa16.15■□□□□ 0.18
TUBGCP4-201ENST00000260383 NCBP3Q53F19 620 aaKnown RBP16.15■□□□□ 0.18
TUBGCP4-201ENST00000260383 PLCB2Q00722 1185 aa16.15■□□□□ 0.18
TUBGCP4-201ENST00000260383 CTNNA3Q9UI47 895 aa16.15■□□□□ 0.18
TUBGCP4-201ENST00000260383 AP5Z1O43299 807 aa16.15■□□□□ 0.18
TUBGCP4-201ENST00000260383 NAA30Q147X3 362 aaPredicted RBP16.15■□□□□ 0.18
TUBGCP4-201ENST00000260383 TTC22Q5TAA0 569 aa16.15■□□□□ 0.18
TUBGCP4-201ENST00000260383 OTUD7AQ8TE49 926 aaPredicted RBP16.15■□□□□ 0.18
TUBGCP4-201ENST00000260383 SYAP1Q96A49 352 aaPredicted RBP16.15■□□□□ 0.18
TUBGCP4-201ENST00000260383 PLEKHF1Q96S99 279 aa16.15■□□□□ 0.18
TUBGCP4-201ENST00000260383 DUOX2Q9NRD8 1548 aa16.14■□□□□ 0.17
TUBGCP4-201ENST00000260383 ADGRB2O60241 1585 aa16.14■□□□□ 0.17
TUBGCP4-201ENST00000260383 TMX3Q96JJ7 454 aa16.14■□□□□ 0.17
TUBGCP4-201ENST00000260383 U2SURPO15042 1029 aaKnown RBP16.14■□□□□ 0.17
TUBGCP4-201ENST00000260383 CHAF1AQ13111 956 aaPredicted RBP16.14■□□□□ 0.17
TUBGCP4-201ENST00000260383 RSPH4AQ5TD94 716 aa16.14■□□□□ 0.17
TUBGCP4-201ENST00000260383 FAM184AQ8NB25 1140 aa16.14■□□□□ 0.17
TUBGCP4-201ENST00000260383 SPHKAPQ2M3C7 1700 aa16.13■□□□□ 0.17
TUBGCP4-201ENST00000260383 PTPRTO14522 1441 aa16.13■□□□□ 0.17
TUBGCP4-201ENST00000260383 USP48Q86UV5 1035 aa16.13■□□□□ 0.17
TUBGCP4-201ENST00000260383 MED14O60244 1454 aa16.13■□□□□ 0.17
TUBGCP4-201ENST00000260383 GABPB1Q06547 395 aaPredicted RBP16.13■□□□□ 0.17
TUBGCP4-201ENST00000260383 INTS3Q68E01 1043 aaKnown RBP16.13■□□□□ 0.17
TUBGCP4-201ENST00000260383 SYCP2Q9BX26 1530 aa16.12■□□□□ 0.17
TUBGCP4-201ENST00000260383 CLTCL1P53675 1640 aa16.12■□□□□ 0.17
TUBGCP4-201ENST00000260383 KDM4AO75164 1064 aa16.12■□□□□ 0.17
TUBGCP4-201ENST00000260383 ATAD2Q6PL18 1390 aa16.11■□□□□ 0.17
TUBGCP4-201ENST00000260383 NEK4P51957 841 aa16.11■□□□□ 0.17
TUBGCP4-201ENST00000260383 NOL8Q76FK4 1167 aaKnown RBP16.11■□□□□ 0.17
TUBGCP4-201ENST00000260383 SPC24Q8NBT2 197 aa16.11■□□□□ 0.17
TUBGCP4-201ENST00000260383 PHF14O94880 888 aa16.11■□□□□ 0.17
TUBGCP4-201ENST00000260383 SDSP20132 328 aa16.11■□□□□ 0.17
TUBGCP4-201ENST00000260383 ALDH1L2Q3SY69 923 aa16.11■□□□□ 0.17
TUBGCP4-201ENST00000260383 DDX41Q9UJV9 622 aaKnown RBP16.11■□□□□ 0.17
TUBGCP4-201ENST00000260383 MAST1Q9Y2H9 1570 aa16.11■□□□□ 0.17
TUBGCP4-201ENST00000260383 ANKRD36BQ8N2N9 1353 aa16.1■□□□□ 0.17
TUBGCP4-201ENST00000260383 CDC42BPBQ9Y5S2 1711 aa16.1■□□□□ 0.17
TUBGCP4-201ENST00000260383 PPRC1Q5VV67 1664 aaKnown RBP16.09■□□□□ 0.17
TUBGCP4-201ENST00000260383 ADGRF5Q8IZF2 1346 aa16.09■□□□□ 0.17
TUBGCP4-201ENST00000260383 TERF2Q15554 542 aa16.09■□□□□ 0.17
TUBGCP4-201ENST00000260383 ADGRL1O94910 1474 aa16.09■□□□□ 0.17
TUBGCP4-201ENST00000260383 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.16
TUBGCP4-201ENST00000260383 IL16Q14005 1332 aa16.07■□□□□ 0.16
TUBGCP4-201ENST00000260383 MORC2Q9Y6X9 1032 aaPredicted RBP16.07■□□□□ 0.16
TUBGCP4-201ENST00000260383 APBB1O00213 710 aa16.06■□□□□ 0.16
TUBGCP4-201ENST00000260383 CAPN2P17655 700 aa16.06■□□□□ 0.16
TUBGCP4-201ENST00000260383 CCDC183Q5T5S1 534 aa16.06■□□□□ 0.16
TUBGCP4-201ENST00000260383 MRPL50Q8N5N7 158 aaKnown RBP16.06■□□□□ 0.16
TUBGCP4-201ENST00000260383 ERICH4A6NGS2 130 aa16.06■□□□□ 0.16
TUBGCP4-201ENST00000260383 REREQ9P2R6 1566 aa16.05■□□□□ 0.16
TUBGCP4-201ENST00000260383 ELL2O00472 640 aaPredicted RBP16.05■□□□□ 0.16
TUBGCP4-201ENST00000260383 CUL4AQ13619 759 aa16.05■□□□□ 0.16
TUBGCP4-201ENST00000260383 TSPYL6Q8N831 410 aa16.05■□□□□ 0.16
TUBGCP4-201ENST00000260383 KIF18AQ8NI77 898 aa16.05■□□□□ 0.16
TUBGCP4-201ENST00000260383 DCTPP1Q9H773 170 aa16.05■□□□□ 0.16
TUBGCP4-201ENST00000260383 MX1P20591 662 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms