RNA–Protein interactions for RNA: ENST00000260359.10

NUSAP1-201, Transcript of nucleolar and spindle associated protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUSAP1, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUSAP1-201ENST00000260359 TMPOP42166 694 aaKnown RBP13.21□□□□□ -0.29
NUSAP1-201ENST00000260359 RIPK4P57078 832 aa13.21□□□□□ -0.29
NUSAP1-201ENST00000260359 NCOA3Q9Y6Q9 1424 aa13.21□□□□□ -0.29
NUSAP1-201ENST00000260359 PEAK1Q9H792 1746 aa13.21□□□□□ -0.29
NUSAP1-201ENST00000260359 GCP02774 474 aa13.21□□□□□ -0.3
NUSAP1-201ENST00000260359 HOXC9P31274 260 aa13.21□□□□□ -0.3
NUSAP1-201ENST00000260359 ZC3H6P61129 1189 aaKnown RBP13.21□□□□□ -0.3
NUSAP1-201ENST00000260359 NEFMP07197 916 aa13.2□□□□□ -0.3
NUSAP1-201ENST00000260359 SLFN5Q08AF3 891 aa13.2□□□□□ -0.3
NUSAP1-201ENST00000260359 DUSP27Q5VZP5 1158 aa13.2□□□□□ -0.3
NUSAP1-201ENST00000260359 DCCP43146 1447 aa13.2□□□□□ -0.3
NUSAP1-201ENST00000260359 SBNO1A3KN83 1393 aa13.19□□□□□ -0.3
NUSAP1-201ENST00000260359 FLT4P35916 1363 aa13.19□□□□□ -0.3
NUSAP1-201ENST00000260359 USHBP1Q8N6Y0 703 aa13.19□□□□□ -0.3
NUSAP1-201ENST00000260359 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
NUSAP1-201ENST00000260359 NPHP3Q7Z494 1330 aa13.19□□□□□ -0.3
NUSAP1-201ENST00000260359 EYA1Q99502 592 aa13.18□□□□□ -0.3
NUSAP1-201ENST00000260359 THUMPD2Q9BTF0 503 aaKnown RBP13.18□□□□□ -0.3
NUSAP1-201ENST00000260359 IQSEC2Q5JU85 1478 aa13.18□□□□□ -0.3
NUSAP1-201ENST00000260359 PNNQ9H307 717 aaKnown RBP13.18□□□□□ -0.3
NUSAP1-201ENST00000260359 TRIM35Q9UPQ4 493 aa13.18□□□□□ -0.3
NUSAP1-201ENST00000260359 MARF1Q9Y4F3 1742 aaKnown RBP13.17□□□□□ -0.3
NUSAP1-201ENST00000260359 KCNH5Q8NCM2 988 aa13.17□□□□□ -0.3
NUSAP1-201ENST00000260359 PLIN1O60240 522 aa13.17□□□□□ -0.3
NUSAP1-201ENST00000260359 LAS1LQ9Y4W2 734 aaKnown RBP13.17□□□□□ -0.3
NUSAP1-201ENST00000260359 FAM83GA6ND36 823 aa13.15□□□□□ -0.3
NUSAP1-201ENST00000260359 E9PSI1 815 aa13.15□□□□□ -0.3
NUSAP1-201ENST00000260359 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
NUSAP1-201ENST00000260359 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
NUSAP1-201ENST00000260359 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.3
NUSAP1-201ENST00000260359 AXIN2Q9Y2T1 843 aa13.15□□□□□ -0.3
NUSAP1-201ENST00000260359 KIF1AQ12756 1690 aa13.15□□□□□ -0.3
NUSAP1-201ENST00000260359 CHRNA2Q15822 529 aa13.14□□□□□ -0.31
NUSAP1-201ENST00000260359 IP6K1Q92551 441 aa13.14□□□□□ -0.31
NUSAP1-201ENST00000260359 NFE2L2Q16236 605 aa13.14□□□□□ -0.31
NUSAP1-201ENST00000260359 ARHGEF25Q86VW2 580 aa13.14□□□□□ -0.31
NUSAP1-201ENST00000260359 TRPM3Q9HCF6 1732 aaPredicted RBP13.14□□□□□ -0.31
NUSAP1-201ENST00000260359 SPATA31A3Q5VYP0 1347 aa13.13□□□□□ -0.31
NUSAP1-201ENST00000260359 CCDC27Q2M243 656 aa13.13□□□□□ -0.31
NUSAP1-201ENST00000260359 TRMT2AQ8IZ69 625 aaKnown RBP13.13□□□□□ -0.31
NUSAP1-201ENST00000260359 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
NUSAP1-201ENST00000260359 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
NUSAP1-201ENST00000260359 WDR63Q8IWG1 891 aa13.12□□□□□ -0.31
NUSAP1-201ENST00000260359 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
NUSAP1-201ENST00000260359 NFAT5O94916 1531 aa13.12□□□□□ -0.31
NUSAP1-201ENST00000260359 USP19O94966 1318 aa13.12□□□□□ -0.31
NUSAP1-201ENST00000260359 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
NUSAP1-201ENST00000260359 LTN1O94822 1766 aa13.11□□□□□ -0.31
NUSAP1-201ENST00000260359 PXDNQ92626 1479 aa13.11□□□□□ -0.31
NUSAP1-201ENST00000260359 TNS3Q68CZ2 1445 aa13.11□□□□□ -0.31
NUSAP1-201ENST00000260359 BCAR3O75815 825 aa13.11□□□□□ -0.31
NUSAP1-201ENST00000260359 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
NUSAP1-201ENST00000260359 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
NUSAP1-201ENST00000260359 IGSF1Q8N6C5 1336 aa13.1□□□□□ -0.31
NUSAP1-201ENST00000260359 MTHFSDQ2M296 383 aaKnown RBP13.1□□□□□ -0.31
NUSAP1-201ENST00000260359 MCM10Q7L590 875 aa13.1□□□□□ -0.31
NUSAP1-201ENST00000260359 ANKRD24Q8TF21 1146 aa13.1□□□□□ -0.31
NUSAP1-201ENST00000260359 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
NUSAP1-201ENST00000260359 MED1Q15648 1581 aaPredicted RBP13.1□□□□□ -0.31
NUSAP1-201ENST00000260359 ARHGEF10O15013 1369 aa13.09□□□□□ -0.31
NUSAP1-201ENST00000260359 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
NUSAP1-201ENST00000260359 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
NUSAP1-201ENST00000260359 ALS2Q96Q42 1657 aa13.08□□□□□ -0.32
NUSAP1-201ENST00000260359 EXOSC9Q06265 439 aaKnown RBP13.08□□□□□ -0.32
NUSAP1-201ENST00000260359 MYH16Q9H6N6 1097 aa13.08□□□□□ -0.32
NUSAP1-201ENST00000260359 CSB-PGBD3P0DP91 1061 aa13.08□□□□□ -0.32
NUSAP1-201ENST00000260359 KIAA0232Q92628 1395 aa13.08□□□□□ -0.32
NUSAP1-201ENST00000260359 USP54Q70EL1 1684 aa13.08□□□□□ -0.32
NUSAP1-201ENST00000260359 RNF123Q5XPI4 1314 aa13.07□□□□□ -0.32
NUSAP1-201ENST00000260359 SLIT3O75094 1523 aa13.07□□□□□ -0.32
NUSAP1-201ENST00000260359 RTL1A6NKG5 1358 aa13.07□□□□□ -0.32
NUSAP1-201ENST00000260359 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
NUSAP1-201ENST00000260359 ELL2O00472 640 aaPredicted RBP13.07□□□□□ -0.32
NUSAP1-201ENST00000260359 C20orf194Q5TEA3 1177 aa13.07□□□□□ -0.32
NUSAP1-201ENST00000260359 NLRP2Q9NX02 1062 aa13.07□□□□□ -0.32
NUSAP1-201ENST00000260359 LTBP4Q8N2S1 1624 aa13.06□□□□□ -0.32
NUSAP1-201ENST00000260359 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
NUSAP1-201ENST00000260359 RGPD1P0DJD0 1748 aa13.06□□□□□ -0.32
NUSAP1-201ENST00000260359 PRDM11Q9NQV5 511 aa13.05□□□□□ -0.32
NUSAP1-201ENST00000260359 B4GALNT3Q6L9W6 998 aa13.05□□□□□ -0.32
NUSAP1-201ENST00000260359 EXOC6Q8TAG9 804 aa13.05□□□□□ -0.32
NUSAP1-201ENST00000260359 FRAT1Q92837 279 aaPredicted RBP13.05□□□□□ -0.32
NUSAP1-201ENST00000260359 KDRP35968 1356 aa13.05□□□□□ -0.32
NUSAP1-201ENST00000260359 RTF1Q92541 710 aaKnown RBP13.04□□□□□ -0.32
NUSAP1-201ENST00000260359 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
NUSAP1-201ENST00000260359 TCERG1O14776 1098 aaKnown RBP13.03□□□□□ -0.32
NUSAP1-201ENST00000260359 LMOD3Q0VAK6 560 aa13.03□□□□□ -0.32
NUSAP1-201ENST00000260359 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
NUSAP1-201ENST00000260359 MBIPQ9NS73 344 aa13.03□□□□□ -0.32
NUSAP1-201ENST00000260359 ERBB3P21860 1342 aa13.03□□□□□ -0.32
NUSAP1-201ENST00000260359 DLG5Q8TDM6 1919 aa13.03□□□□□ -0.32
NUSAP1-201ENST00000260359 RGPD5Q99666 1765 aa13.03□□□□□ -0.32
NUSAP1-201ENST00000260359 CANXP27824 592 aaKnown RBP13.02□□□□□ -0.32
NUSAP1-201ENST00000260359 RARSP54136 660 aaKnown RBP13.02□□□□□ -0.32
NUSAP1-201ENST00000260359 GAS2L2Q8NHY3 880 aa13.02□□□□□ -0.32
NUSAP1-201ENST00000260359 STRN4Q9NRL3 753 aa13.02□□□□□ -0.32
NUSAP1-201ENST00000260359 KRT24Q2M2I5 525 aa13.02□□□□□ -0.33
NUSAP1-201ENST00000260359 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
NUSAP1-201ENST00000260359 CRBNQ96SW2 442 aa13.02□□□□□ -0.33
NUSAP1-201ENST00000260359 UBAP1LF5GYI3 381 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms