RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 ARID3AQ99856 593 aa18.36■□□□□ 0.53
MSI1-201ENST00000257552 PTPRMP28827 1452 aa18.35■□□□□ 0.53
MSI1-201ENST00000257552 ZFYVE9O95405 1425 aa18.35■□□□□ 0.53
MSI1-201ENST00000257552 TERF2IPQ9NYB0 399 aa18.35■□□□□ 0.53
MSI1-201ENST00000257552 GAS2L2Q8NHY3 880 aa18.35■□□□□ 0.53
MSI1-201ENST00000257552 FAM13BQ9NYF5 915 aa18.35■□□□□ 0.53
MSI1-201ENST00000257552 A2ML1A8K2U0 1454 aa18.35■□□□□ 0.53
MSI1-201ENST00000257552 GOLGA6L22H0YM25 854 aa18.34■□□□□ 0.53
MSI1-201ENST00000257552 NUCB1Q02818 461 aa18.34■□□□□ 0.53
MSI1-201ENST00000257552 ANKRD45Q5TZF3 282 aa18.34■□□□□ 0.53
MSI1-201ENST00000257552 CHD1LQ86WJ1 897 aa18.34■□□□□ 0.53
MSI1-201ENST00000257552 R3HCC1Q9Y3T6 440 aaKnown RBP18.34■□□□□ 0.53
MSI1-201ENST00000257552 K7ELQ4 463 aaPredicted RBP18.33■□□□□ 0.53
MSI1-201ENST00000257552 ZBTB40Q9NUA8 1239 aa18.33■□□□□ 0.53
MSI1-201ENST00000257552 ALKQ9UM73 1620 aa18.33■□□□□ 0.52
MSI1-201ENST00000257552 OFD1O75665 1012 aa18.32■□□□□ 0.52
MSI1-201ENST00000257552 HDGFL2Q7Z4V5 671 aaPredicted RBP18.32■□□□□ 0.52
MSI1-201ENST00000257552 PPP1R9BQ96SB3 815 aa18.32■□□□□ 0.52
MSI1-201ENST00000257552 METP08581 1390 aa18.32■□□□□ 0.52
MSI1-201ENST00000257552 IQSEC2Q5JU85 1478 aa18.32■□□□□ 0.52
MSI1-201ENST00000257552 C1orf115Q9H7X2 142 aa18.32■□□□□ 0.52
MSI1-201ENST00000257552 RIPK4P57078 832 aa18.31■□□□□ 0.52
MSI1-201ENST00000257552 TRHP20396 242 aaPredicted RBP18.31■□□□□ 0.52
MSI1-201ENST00000257552 PPP6R1Q9UPN7 881 aa18.31■□□□□ 0.52
MSI1-201ENST00000257552 BAG4O95429 457 aaKnown RBP18.3■□□□□ 0.52
MSI1-201ENST00000257552 MCTP1Q6DN14 999 aa18.3■□□□□ 0.52
MSI1-201ENST00000257552 CAVIN1Q6NZI2 390 aaKnown RBP18.3■□□□□ 0.52
MSI1-201ENST00000257552 TBC1D9Q6ZT07 1266 aa18.3■□□□□ 0.52
MSI1-201ENST00000257552 ZRANB1Q9UGI0 708 aa18.3■□□□□ 0.52
MSI1-201ENST00000257552 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
MSI1-201ENST00000257552 SLC26A8Q96RN1 970 aa18.29■□□□□ 0.52
MSI1-201ENST00000257552 PTMSP20962 102 aa18.29■□□□□ 0.52
MSI1-201ENST00000257552 XPCQ01831 940 aaPredicted RBP18.29■□□□□ 0.52
MSI1-201ENST00000257552 KLHL40Q2TBA0 621 aa18.28■□□□□ 0.52
MSI1-201ENST00000257552 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.28■□□□□ 0.52
MSI1-201ENST00000257552 BMP2KLQ5H9B9 411 aa18.28■□□□□ 0.52
MSI1-201ENST00000257552 ABCC11Q96J66 1382 aa18.28■□□□□ 0.52
MSI1-201ENST00000257552 TMPOP42166 694 aaKnown RBP18.27■□□□□ 0.52
MSI1-201ENST00000257552 PUS7Q96PZ0 661 aaKnown RBP18.27■□□□□ 0.52
MSI1-201ENST00000257552 AGLP35573 1532 aa18.27■□□□□ 0.52
MSI1-201ENST00000257552 TRIM35Q9UPQ4 493 aa18.27■□□□□ 0.52
MSI1-201ENST00000257552 KIF13AQ9H1H9 1805 aa18.27■□□□□ 0.51
MSI1-201ENST00000257552 CT47B1P0C2W7 299 aaPredicted RBP18.26■□□□□ 0.51
MSI1-201ENST00000257552 CALD1Q05682 793 aaKnown RBP18.26■□□□□ 0.51
MSI1-201ENST00000257552 IPO8O15397 1037 aaKnown RBP18.25■□□□□ 0.51
MSI1-201ENST00000257552 CD163L1Q9NR16 1453 aa18.25■□□□□ 0.51
MSI1-201ENST00000257552 TNRQ92752 1358 aa18.24■□□□□ 0.51
MSI1-201ENST00000257552 ZBTB7CA1YPR0 619 aa18.24■□□□□ 0.51
MSI1-201ENST00000257552 LTKP29376 864 aa18.24■□□□□ 0.51
MSI1-201ENST00000257552 PKP1Q13835 747 aa18.24■□□□□ 0.51
MSI1-201ENST00000257552 NME9Q86XW9 330 aa18.24■□□□□ 0.51
MSI1-201ENST00000257552 RBSNQ9H1K0 784 aa18.24■□□□□ 0.51
MSI1-201ENST00000257552 ZSCAN23Q3MJ62 389 aa18.24■□□□□ 0.51
MSI1-201ENST00000257552 WASLO00401 505 aaPredicted RBP18.23■□□□□ 0.51
MSI1-201ENST00000257552 SOX12O15370 315 aa18.23■□□□□ 0.51
MSI1-201ENST00000257552 RBM27Q9P2N5 1060 aaKnown RBP18.23■□□□□ 0.51
MSI1-201ENST00000257552 ARHGEF40Q8TER5 1519 aa18.23■□□□□ 0.51
MSI1-201ENST00000257552 SHPRHQ149N8 1683 aa18.23■□□□□ 0.51
MSI1-201ENST00000257552 SPATA31D1Q6ZQQ2 1576 aa18.23■□□□□ 0.51
MSI1-201ENST00000257552 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.23■□□□□ 0.51
MSI1-201ENST00000257552 HMOX1P09601 288 aa18.22■□□□□ 0.51
MSI1-201ENST00000257552 PRIM1P49642 420 aaKnown RBP18.22■□□□□ 0.51
MSI1-201ENST00000257552 CHAMP1Q96JM3 812 aa18.22■□□□□ 0.51
MSI1-201ENST00000257552 UQCRHLA0A096LP55 91 aa18.22■□□□□ 0.51
MSI1-201ENST00000257552 UQCRHP07919 91 aa18.22■□□□□ 0.51
MSI1-201ENST00000257552 NUDT16Q96DE0 195 aaKnown RBP18.21■□□□□ 0.51
MSI1-201ENST00000257552 EMILIN1Q9Y6C2 1016 aa18.21■□□□□ 0.51
MSI1-201ENST00000257552 NSD2O96028 1365 aa18.21■□□□□ 0.51
MSI1-201ENST00000257552 KIF16BQ96L93 1317 aa18.21■□□□□ 0.51
MSI1-201ENST00000257552 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.5
MSI1-201ENST00000257552 PRPF40AO75400 957 aaKnown RBP18.21■□□□□ 0.5
MSI1-201ENST00000257552 RRS1Q15050 365 aaKnown RBP18.2■□□□□ 0.5
MSI1-201ENST00000257552 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
MSI1-201ENST00000257552 ELL2O00472 640 aaPredicted RBP18.2■□□□□ 0.5
MSI1-201ENST00000257552 FOXD4L5Q5VV16 416 aaPredicted RBP18.2■□□□□ 0.5
MSI1-201ENST00000257552 FOXD4L4Q8WXT5 416 aaPredicted RBP18.2■□□□□ 0.5
MSI1-201ENST00000257552 REREQ9P2R6 1566 aa18.19■□□□□ 0.5
MSI1-201ENST00000257552 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.19■□□□□ 0.5
MSI1-201ENST00000257552 NOL7Q9UMY1 257 aaKnown RBP18.19■□□□□ 0.5
MSI1-201ENST00000257552 ZNF445P59923 1031 aa18.19■□□□□ 0.5
MSI1-201ENST00000257552 LMBRD1Q9NUN5 540 aa18.19■□□□□ 0.5
MSI1-201ENST00000257552 HDGFP51858 240 aaKnown RBP18.18■□□□□ 0.5
MSI1-201ENST00000257552 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
MSI1-201ENST00000257552 PPIP5K1Q6PFW1 1433 aa18.18■□□□□ 0.5
MSI1-201ENST00000257552 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
MSI1-201ENST00000257552 CDC45O75419 566 aa18.17■□□□□ 0.5
MSI1-201ENST00000257552 TMEM2Q9UHN6 1383 aa18.17■□□□□ 0.5
MSI1-201ENST00000257552 CLEC17AQ6ZS10 378 aa18.17■□□□□ 0.5
MSI1-201ENST00000257552 RNF214Q8ND24 703 aa18.17■□□□□ 0.5
MSI1-201ENST00000257552 GCC1Q96CN9 775 aa18.16■□□□□ 0.5
MSI1-201ENST00000257552 SIRT2Q8IXJ6 389 aa18.16■□□□□ 0.5
MSI1-201ENST00000257552 ZGPATQ8N5A5 531 aaKnown RBP18.16■□□□□ 0.5
MSI1-201ENST00000257552 NUCB2P80303 420 aa18.15■□□□□ 0.5
MSI1-201ENST00000257552 CCDC61Q9Y6R9 512 aa18.15■□□□□ 0.5
MSI1-201ENST00000257552 ROBO2Q9HCK4 1378 aa18.15■□□□□ 0.5
MSI1-201ENST00000257552 IBTKQ9P2D0 1353 aaPredicted RBP18.15■□□□□ 0.5
MSI1-201ENST00000257552 PRKAR2BP31323 418 aa18.15■□□□□ 0.5
MSI1-201ENST00000257552 THUMPD2Q9BTF0 503 aaKnown RBP18.15■□□□□ 0.5
MSI1-201ENST00000257552 PRDM4Q9UKN5 801 aa18.15■□□□□ 0.5
MSI1-201ENST00000257552 GSPT1P15170 499 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms