RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 RALGAPBQ86X10 1494 aa11.3□□□□□ -0.6
PDE6A-201ENST00000255266 ABCC11Q96J66 1382 aa11.3□□□□□ -0.6
PDE6A-201ENST00000255266 GOLGA6L6A8MZA4 724 aa11.3□□□□□ -0.6
PDE6A-201ENST00000255266 IL2RBP14784 551 aa11.3□□□□□ -0.6
PDE6A-201ENST00000255266 ZNF428Q96B54 188 aa11.3□□□□□ -0.6
PDE6A-201ENST00000255266 ERCC6L2Q5T890 1561 aa11.3□□□□□ -0.6
PDE6A-201ENST00000255266 MPRIPQ6WCQ1 1025 aa11.3□□□□□ -0.6
PDE6A-201ENST00000255266 MPHOSPH8Q99549 860 aa11.3□□□□□ -0.6
PDE6A-201ENST00000255266 PTPRKQ15262 1439 aa11.3□□□□□ -0.6
PDE6A-201ENST00000255266 CLSTN1O94985 981 aa11.29□□□□□ -0.6
PDE6A-201ENST00000255266 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.29□□□□□ -0.6
PDE6A-201ENST00000255266 PIK3C2GO75747 1445 aa11.29□□□□□ -0.6
PDE6A-201ENST00000255266 ST5P78524 1137 aa11.29□□□□□ -0.6
PDE6A-201ENST00000255266 TCEAL9Q9UHQ7 104 aa11.29□□□□□ -0.6
PDE6A-201ENST00000255266 SHROOM2Q13796 1616 aa11.29□□□□□ -0.6
PDE6A-201ENST00000255266 MARCH6O60337 910 aa11.29□□□□□ -0.6
PDE6A-201ENST00000255266 TAF7Q15545 349 aaPredicted RBP11.29□□□□□ -0.6
PDE6A-201ENST00000255266 NPATQ14207 1427 aa11.29□□□□□ -0.6
PDE6A-201ENST00000255266 RFC4P35249 363 aa11.29□□□□□ -0.6
PDE6A-201ENST00000255266 STK32BQ9NY57 414 aa11.29□□□□□ -0.6
PDE6A-201ENST00000255266 ERICH2A1L162 156 aa11.28□□□□□ -0.6
PDE6A-201ENST00000255266 ADCY10Q96PN6 1610 aa11.28□□□□□ -0.6
PDE6A-201ENST00000255266 PIK3R4Q99570 1358 aa11.28□□□□□ -0.6
PDE6A-201ENST00000255266 TRDNQ13061 729 aa11.28□□□□□ -0.6
PDE6A-201ENST00000255266 RPGRQ92834 1020 aaKnown RBP11.28□□□□□ -0.6
PDE6A-201ENST00000255266 CPLX2Q6PUV4 134 aaKnown RBP11.28□□□□□ -0.6
PDE6A-201ENST00000255266 CCDC57Q2TAC2 916 aa11.28□□□□□ -0.6
PDE6A-201ENST00000255266 CCDC158Q5M9N0 1113 aa11.28□□□□□ -0.6
PDE6A-201ENST00000255266 CCDC27Q2M243 656 aa11.27□□□□□ -0.6
PDE6A-201ENST00000255266 NEUROD6Q96NK8 337 aa11.27□□□□□ -0.6
PDE6A-201ENST00000255266 PRAG1Q86YV5 1406 aa11.27□□□□□ -0.6
PDE6A-201ENST00000255266 BAG6P46379 1132 aa11.27□□□□□ -0.6
PDE6A-201ENST00000255266 CHRNA2Q15822 529 aa11.27□□□□□ -0.6
PDE6A-201ENST00000255266 TMOD2Q9NZR1 351 aa11.27□□□□□ -0.6
PDE6A-201ENST00000255266 ABCA9Q8IUA7 1624 aa11.27□□□□□ -0.61
PDE6A-201ENST00000255266 USP21Q9UK80 565 aa11.27□□□□□ -0.61
PDE6A-201ENST00000255266 APPP05067 770 aa11.27□□□□□ -0.61
PDE6A-201ENST00000255266 MYL6BP14649 208 aa11.27□□□□□ -0.61
PDE6A-201ENST00000255266 VPS53Q5VIR6 699 aa11.27□□□□□ -0.61
PDE6A-201ENST00000255266 SRCIN1Q9C0H9 1055 aa11.27□□□□□ -0.61
PDE6A-201ENST00000255266 RNF20Q5VTR2 975 aa11.26□□□□□ -0.61
PDE6A-201ENST00000255266 CCAR1Q8IX12 1150 aaKnown RBP11.26□□□□□ -0.61
PDE6A-201ENST00000255266 BICDL1Q6ZP65 573 aa11.26□□□□□ -0.61
PDE6A-201ENST00000255266 ADAMTS8Q9UP79 889 aa11.26□□□□□ -0.61
PDE6A-201ENST00000255266 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.26□□□□□ -0.61
PDE6A-201ENST00000255266 ERVK-7P63135 1459 aa11.26□□□□□ -0.61
PDE6A-201ENST00000255266 PCDH11XQ9BZA7 1347 aa11.26□□□□□ -0.61
PDE6A-201ENST00000255266 PCDH11YQ9BZA8 1340 aa11.26□□□□□ -0.61
PDE6A-201ENST00000255266 PLIN1O60240 522 aa11.26□□□□□ -0.61
PDE6A-201ENST00000255266 TTC39AQ5SRH9 613 aa11.26□□□□□ -0.61
PDE6A-201ENST00000255266 ANKRD45Q5TZF3 282 aa11.26□□□□□ -0.61
PDE6A-201ENST00000255266 RILPL2Q969X0 211 aa11.26□□□□□ -0.61
PDE6A-201ENST00000255266 BCL2L13Q9BXK5 485 aa11.25□□□□□ -0.61
PDE6A-201ENST00000255266 ZSCAN25Q6NSZ9 544 aa11.25□□□□□ -0.61
PDE6A-201ENST00000255266 PPP1R42Q7Z4L9 355 aa11.25□□□□□ -0.61
PDE6A-201ENST00000255266 GLI2P10070 1586 aa11.25□□□□□ -0.61
PDE6A-201ENST00000255266 LARP1Q6PKG0 1096 aaKnown RBP11.25□□□□□ -0.61
PDE6A-201ENST00000255266 PZPP20742 1482 aa11.25□□□□□ -0.61
PDE6A-201ENST00000255266 ZFYVE9O95405 1425 aa11.25□□□□□ -0.61
PDE6A-201ENST00000255266 HIP1O00291 1037 aa11.25□□□□□ -0.61
PDE6A-201ENST00000255266 PTMSP20962 102 aa11.25□□□□□ -0.61
PDE6A-201ENST00000255266 IFT57Q9NWB7 429 aa11.24□□□□□ -0.61
PDE6A-201ENST00000255266 HYPKQ9NX55 129 aa11.24□□□□□ -0.61
PDE6A-201ENST00000255266 FLT4P35916 1363 aa11.24□□□□□ -0.61
PDE6A-201ENST00000255266 RAD21O60216 631 aa11.24□□□□□ -0.61
PDE6A-201ENST00000255266 A2ML1A8K2U0 1454 aa11.24□□□□□ -0.61
PDE6A-201ENST00000255266 GNAI2P04899 355 aa11.24□□□□□ -0.61
PDE6A-201ENST00000255266 CSPP1Q1MSJ5 1256 aa11.24□□□□□ -0.61
PDE6A-201ENST00000255266 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
PDE6A-201ENST00000255266 CENPQQ7L2Z9 268 aaPredicted RBP11.24□□□□□ -0.61
PDE6A-201ENST00000255266 BTG4Q9NY30 223 aa11.24□□□□□ -0.61
PDE6A-201ENST00000255266 TRPC5Q9UL62 973 aaPredicted RBP11.24□□□□□ -0.61
PDE6A-201ENST00000255266 USHBP1Q8N6Y0 703 aa11.23□□□□□ -0.61
PDE6A-201ENST00000255266 ZKSCAN1P17029 563 aaPredicted RBP11.23□□□□□ -0.61
PDE6A-201ENST00000255266 CLASRPQ8N2M8 674 aaKnown RBP11.23□□□□□ -0.61
PDE6A-201ENST00000255266 PTCD1O75127 700 aaKnown RBP11.23□□□□□ -0.61
PDE6A-201ENST00000255266 GCC2Q8IWJ2 1684 aa11.23□□□□□ -0.61
PDE6A-201ENST00000255266 COL17A1Q9UMD9 1497 aaPredicted RBP11.23□□□□□ -0.61
PDE6A-201ENST00000255266 TCERG1O14776 1098 aaKnown RBP11.22□□□□□ -0.61
PDE6A-201ENST00000255266 TMEM94Q12767 1356 aa11.22□□□□□ -0.61
PDE6A-201ENST00000255266 WASHC4Q2M389 1173 aa11.22□□□□□ -0.61
PDE6A-201ENST00000255266 NRDCO43847 1150 aa11.22□□□□□ -0.61
PDE6A-201ENST00000255266 PARP3Q9Y6F1 533 aa11.22□□□□□ -0.61
PDE6A-201ENST00000255266 SLF2Q8IX21 1173 aa11.22□□□□□ -0.61
PDE6A-201ENST00000255266 EMILIN1Q9Y6C2 1016 aa11.22□□□□□ -0.61
PDE6A-201ENST00000255266 MBD5Q9P267 1494 aa11.22□□□□□ -0.61
PDE6A-201ENST00000255266 DHX16O60231 1041 aaKnown RBP11.22□□□□□ -0.61
PDE6A-201ENST00000255266 GCP02774 474 aa11.22□□□□□ -0.61
PDE6A-201ENST00000255266 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
PDE6A-201ENST00000255266 PLXNC1O60486 1568 aa11.22□□□□□ -0.61
PDE6A-201ENST00000255266 ST18O60284 1047 aa11.21□□□□□ -0.61
PDE6A-201ENST00000255266 RRP1P56182 461 aaKnown RBP11.21□□□□□ -0.61
PDE6A-201ENST00000255266 NYXQ9GZU5 481 aa11.21□□□□□ -0.61
PDE6A-201ENST00000255266 AKAP4Q5JQC9 854 aa11.21□□□□□ -0.61
PDE6A-201ENST00000255266 SNRPA1P09661 255 aaKnown RBP11.21□□□□□ -0.62
PDE6A-201ENST00000255266 ATP6V1AP38606 617 aa11.21□□□□□ -0.62
PDE6A-201ENST00000255266 EXOSC9Q06265 439 aaKnown RBP11.21□□□□□ -0.62
PDE6A-201ENST00000255266 C16orf71Q8IYS4 520 aaPredicted RBP11.21□□□□□ -0.62
PDE6A-201ENST00000255266 RASSF8Q8NHQ8 419 aa11.21□□□□□ -0.62
PDE6A-201ENST00000255266 REC8O95072 547 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms