RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 DDX17Q92841 729 aaKnown RBP12.51□□□□□ -0.41
NIP7-202ENST00000254941 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
NIP7-202ENST00000254941 USP19O94966 1318 aa12.5□□□□□ -0.41
NIP7-202ENST00000254941 ZNF521Q96K83 1311 aa12.5□□□□□ -0.41
NIP7-202ENST00000254941 FCHSD2O94868 740 aa12.5□□□□□ -0.41
NIP7-202ENST00000254941 HSP90AB2PQ58FF8 381 aa12.5□□□□□ -0.41
NIP7-202ENST00000254941 PNNQ9H307 717 aaKnown RBP12.5□□□□□ -0.41
NIP7-202ENST00000254941 AMPHP49418 695 aa12.49□□□□□ -0.41
NIP7-202ENST00000254941 EIF4A2Q14240 407 aaKnown RBP12.49□□□□□ -0.41
NIP7-202ENST00000254941 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
NIP7-202ENST00000254941 TNS3Q68CZ2 1445 aa12.49□□□□□ -0.41
NIP7-202ENST00000254941 CRYBG1Q9Y4K1 1723 aa12.49□□□□□ -0.41
NIP7-202ENST00000254941 RTL1A6NKG5 1358 aa12.48□□□□□ -0.41
NIP7-202ENST00000254941 GCP02774 474 aa12.48□□□□□ -0.41
NIP7-202ENST00000254941 LMOD2Q6P5Q4 547 aa12.48□□□□□ -0.41
NIP7-202ENST00000254941 TCP11L2Q8N4U5 519 aa12.48□□□□□ -0.41
NIP7-202ENST00000254941 RSPH6AQ9H0K4 717 aa12.48□□□□□ -0.41
NIP7-202ENST00000254941 MED1Q15648 1581 aaPredicted RBP12.48□□□□□ -0.41
NIP7-202ENST00000254941 SOS2Q07890 1332 aaPredicted RBP12.48□□□□□ -0.41
NIP7-202ENST00000254941 SPATA31A3Q5VYP0 1347 aa12.48□□□□□ -0.41
NIP7-202ENST00000254941 HOXC9P31274 260 aa12.47□□□□□ -0.41
NIP7-202ENST00000254941 ARHGEF10O15013 1369 aa12.47□□□□□ -0.41
NIP7-202ENST00000254941 DLG5Q8TDM6 1919 aa12.46□□□□□ -0.42
NIP7-202ENST00000254941 CCDC27Q2M243 656 aa12.46□□□□□ -0.42
NIP7-202ENST00000254941 ROBO1Q9Y6N7 1651 aa12.45□□□□□ -0.42
NIP7-202ENST00000254941 MAPK8IP3Q9UPT6 1336 aa12.45□□□□□ -0.42
NIP7-202ENST00000254941 HMOX1P09601 288 aa12.45□□□□□ -0.42
NIP7-202ENST00000254941 PRKAR2BP31323 418 aa12.45□□□□□ -0.42
NIP7-202ENST00000254941 ARHGEF25Q86VW2 580 aa12.45□□□□□ -0.42
NIP7-202ENST00000254941 WWC1Q8IX03 1113 aa12.45□□□□□ -0.42
NIP7-202ENST00000254941 IP6K1Q92551 441 aa12.45□□□□□ -0.42
NIP7-202ENST00000254941 CDCA7LQ96GN5 454 aa12.45□□□□□ -0.42
NIP7-202ENST00000254941 RGPD5Q99666 1765 aa12.45□□□□□ -0.42
NIP7-202ENST00000254941 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
NIP7-202ENST00000254941 GTF3C3Q9Y5Q9 886 aa12.44□□□□□ -0.42
NIP7-202ENST00000254941 TMPOP42166 694 aaKnown RBP12.44□□□□□ -0.42
NIP7-202ENST00000254941 RRP7AQ9Y3A4 280 aaKnown RBP12.44□□□□□ -0.42
NIP7-202ENST00000254941 RGPD2P0DJD1 1756 aa12.43□□□□□ -0.42
NIP7-202ENST00000254941 NEFMP07197 916 aa12.43□□□□□ -0.42
NIP7-202ENST00000254941 NEUROD2Q15784 382 aa12.43□□□□□ -0.42
NIP7-202ENST00000254941 KDRP35968 1356 aa12.43□□□□□ -0.42
NIP7-202ENST00000254941 IGSF1Q8N6C5 1336 aa12.43□□□□□ -0.42
NIP7-202ENST00000254941 SULT6B1Q6IMI4 303 aa12.42□□□□□ -0.42
NIP7-202ENST00000254941 COL18A1P39060 1754 aa12.42□□□□□ -0.42
NIP7-202ENST00000254941 AHDC1Q5TGY3 1603 aaPredicted RBP12.42□□□□□ -0.42
NIP7-202ENST00000254941 ABCA3Q99758 1704 aa12.42□□□□□ -0.42
NIP7-202ENST00000254941 SLFN5Q08AF3 891 aa12.42□□□□□ -0.42
NIP7-202ENST00000254941 TRMT2AQ8IZ69 625 aaKnown RBP12.42□□□□□ -0.42
NIP7-202ENST00000254941 PHACTR3Q96KR7 559 aa12.42□□□□□ -0.42
NIP7-202ENST00000254941 EYA1Q99502 592 aa12.42□□□□□ -0.42
NIP7-202ENST00000254941 DUSP27Q5VZP5 1158 aa12.41□□□□□ -0.42
NIP7-202ENST00000254941 AEBP1Q8IUX7 1158 aa12.41□□□□□ -0.42
NIP7-202ENST00000254941 WDR63Q8IWG1 891 aa12.41□□□□□ -0.42
NIP7-202ENST00000254941 ABCC6O95255 1503 aa12.41□□□□□ -0.42
NIP7-202ENST00000254941 E9PSI1 815 aa12.4□□□□□ -0.42
NIP7-202ENST00000254941 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
NIP7-202ENST00000254941 TRIM35Q9UPQ4 493 aa12.4□□□□□ -0.42
NIP7-202ENST00000254941 SUPT16HQ9Y5B9 1047 aaKnown RBP12.4□□□□□ -0.42
NIP7-202ENST00000254941 CPDO75976 1380 aa12.4□□□□□ -0.42
NIP7-202ENST00000254941 RIPK4P57078 832 aa12.4□□□□□ -0.42
NIP7-202ENST00000254941 NFE2L2Q16236 605 aa12.4□□□□□ -0.42
NIP7-202ENST00000254941 CABLES1Q8TDN4 633 aa12.4□□□□□ -0.42
NIP7-202ENST00000254941 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.42
NIP7-202ENST00000254941 ZC3H6P61129 1189 aaKnown RBP12.39□□□□□ -0.43
NIP7-202ENST00000254941 CAMTA1Q9Y6Y1 1673 aa12.39□□□□□ -0.43
NIP7-202ENST00000254941 ZBTB7CA1YPR0 619 aa12.38□□□□□ -0.43
NIP7-202ENST00000254941 LTV1Q96GA3 475 aaPredicted RBP12.38□□□□□ -0.43
NIP7-202ENST00000254941 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
NIP7-202ENST00000254941 FAM208AQ9UK61 1670 aaKnown RBP12.38□□□□□ -0.43
NIP7-202ENST00000254941 TOM1O60784 492 aa12.37□□□□□ -0.43
NIP7-202ENST00000254941 PHLPP1O60346 1717 aa12.36□□□□□ -0.43
NIP7-202ENST00000254941 NCAPD2Q15021 1401 aa12.36□□□□□ -0.43
NIP7-202ENST00000254941 NBPF6Q5VWK0 638 aa12.36□□□□□ -0.43
NIP7-202ENST00000254941 LRRC59Q96AG4 307 aaKnown RBP12.36□□□□□ -0.43
NIP7-202ENST00000254941 NBPF4Q96M43 638 aa12.36□□□□□ -0.43
NIP7-202ENST00000254941 ERBB3P21860 1342 aa12.36□□□□□ -0.43
NIP7-202ENST00000254941 IL16Q14005 1332 aa12.36□□□□□ -0.43
NIP7-202ENST00000254941 KIAA0232Q92628 1395 aa12.36□□□□□ -0.43
NIP7-202ENST00000254941 COL22A1Q8NFW1 1626 aaPredicted RBP12.36□□□□□ -0.43
NIP7-202ENST00000254941 ANKRD24Q8TF21 1146 aa12.36□□□□□ -0.43
NIP7-202ENST00000254941 RCAN3Q9UKA8 241 aa12.36□□□□□ -0.43
NIP7-202ENST00000254941 LMO7Q8WWI1 1683 aa12.36□□□□□ -0.43
NIP7-202ENST00000254941 RNF123Q5XPI4 1314 aa12.35□□□□□ -0.43
NIP7-202ENST00000254941 COL16A1Q07092 1604 aaPredicted RBP12.35□□□□□ -0.43
NIP7-202ENST00000254941 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
NIP7-202ENST00000254941 NEFLP07196 543 aa12.34□□□□□ -0.43
NIP7-202ENST00000254941 MYH16Q9H6N6 1097 aa12.34□□□□□ -0.43
NIP7-202ENST00000254941 CALD1Q05682 793 aaKnown RBP12.33□□□□□ -0.44
NIP7-202ENST00000254941 CHRNA2Q15822 529 aa12.33□□□□□ -0.44
NIP7-202ENST00000254941 USHBP1Q8N6Y0 703 aa12.33□□□□□ -0.44
NIP7-202ENST00000254941 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
NIP7-202ENST00000254941 MTHFSDQ2M296 383 aaKnown RBP12.32□□□□□ -0.44
NIP7-202ENST00000254941 GAS2L2Q8NHY3 880 aa12.32□□□□□ -0.44
NIP7-202ENST00000254941 FKBP8Q14318 412 aa12.31□□□□□ -0.44
NIP7-202ENST00000254941 PRDM11Q9NQV5 511 aa12.31□□□□□ -0.44
NIP7-202ENST00000254941 VIRMAQ69YN4 1812 aaKnown RBP12.31□□□□□ -0.44
NIP7-202ENST00000254941 FANCIQ9NVI1 1328 aa12.3□□□□□ -0.44
NIP7-202ENST00000254941 UBAP1LF5GYI3 381 aa12.3□□□□□ -0.44
NIP7-202ENST00000254941 PIP4K2BP78356 416 aa12.3□□□□□ -0.44
NIP7-202ENST00000254941 FAM83GA6ND36 823 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms