RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 ARHGEF1Q92888 912 aaKnown RBP9.18□□□□□ -0.94
USP29-201ENST00000254181 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.18□□□□□ -0.94
USP29-201ENST00000254181 V9GYY5 206 aaPredicted RBP9.18□□□□□ -0.94
USP29-201ENST00000254181 TRIM66O15016 1216 aa9.17□□□□□ -0.94
USP29-201ENST00000254181 CREB3O43889 395 aa9.17□□□□□ -0.94
USP29-201ENST00000254181 SYT10Q6XYQ8 523 aa9.17□□□□□ -0.94
USP29-201ENST00000254181 C16orf45Q96MC5 204 aaPredicted RBP9.17□□□□□ -0.94
USP29-201ENST00000254181 USP25Q9UHP3 1055 aa9.17□□□□□ -0.94
USP29-201ENST00000254181 MYO1CO00159 1063 aa9.17□□□□□ -0.94
USP29-201ENST00000254181 LEKR1Q6ZMV7 388 aa9.17□□□□□ -0.94
USP29-201ENST00000254181 CTDP1Q9Y5B0 961 aaPredicted RBP9.17□□□□□ -0.94
USP29-201ENST00000254181 TULP2O00295 520 aa9.17□□□□□ -0.94
USP29-201ENST00000254181 DDX46Q7L014 1031 aaKnown RBP9.17□□□□□ -0.94
USP29-201ENST00000254181 ZC3H15Q8WU90 426 aaKnown RBP9.17□□□□□ -0.94
USP29-201ENST00000254181 USP19O94966 1318 aa9.16□□□□□ -0.94
USP29-201ENST00000254181 BAG4O95429 457 aaKnown RBP9.16□□□□□ -0.94
USP29-201ENST00000254181 CSB-PGBD3P0DP91 1061 aa9.16□□□□□ -0.94
USP29-201ENST00000254181 GIMAP6Q6P9H5 292 aa9.16□□□□□ -0.94
USP29-201ENST00000254181 AK7Q96M32 723 aa9.16□□□□□ -0.94
USP29-201ENST00000254181 SPOCK3Q9BQ16 436 aa9.16□□□□□ -0.94
USP29-201ENST00000254181 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.16□□□□□ -0.94
USP29-201ENST00000254181 COG6Q9Y2V7 657 aa9.16□□□□□ -0.94
USP29-201ENST00000254181 SMARCA2P51531 1590 aa9.16□□□□□ -0.94
USP29-201ENST00000254181 MORC4Q8TE76 937 aa9.16□□□□□ -0.94
USP29-201ENST00000254181 PDE6BP35913 854 aa9.16□□□□□ -0.94
USP29-201ENST00000254181 DDX41Q9UJV9 622 aaKnown RBP9.16□□□□□ -0.94
USP29-201ENST00000254181 TPD52L1Q16890 204 aaPredicted RBP9.15□□□□□ -0.94
USP29-201ENST00000254181 SKIDA1Q1XH10 827 aa9.15□□□□□ -0.94
USP29-201ENST00000254181 SDR16C5Q8N3Y7 309 aa9.15□□□□□ -0.94
USP29-201ENST00000254181 ZCRB1Q8TBF4 217 aaKnown RBP9.15□□□□□ -0.94
USP29-201ENST00000254181 DNAAF4Q8WXU2 420 aa9.15□□□□□ -0.94
USP29-201ENST00000254181 PAIP2Q9BPZ3 127 aaKnown RBP9.15□□□□□ -0.94
USP29-201ENST00000254181 IPO8O15397 1037 aaKnown RBP9.15□□□□□ -0.94
USP29-201ENST00000254181 STK10O94804 968 aaKnown RBP9.15□□□□□ -0.94
USP29-201ENST00000254181 ERCC3P19447 782 aa9.15□□□□□ -0.95
USP29-201ENST00000254181 ZNF445P59923 1031 aa9.15□□□□□ -0.95
USP29-201ENST00000254181 RAB3GAP1Q15042 981 aa9.15□□□□□ -0.95
USP29-201ENST00000254181 ZNF397Q8NF99 534 aaPredicted RBP9.15□□□□□ -0.95
USP29-201ENST00000254181 PMFBP1Q8TBY8 1022 aa9.15□□□□□ -0.95
USP29-201ENST00000254181 DONSONQ9NYP3 566 aa9.15□□□□□ -0.95
USP29-201ENST00000254181 CTNNA3Q9UI47 895 aa9.15□□□□□ -0.95
USP29-201ENST00000254181 KIF1CO43896 1103 aaKnown RBP9.14□□□□□ -0.95
USP29-201ENST00000254181 BMS1Q14692 1282 aaKnown RBP9.14□□□□□ -0.95
USP29-201ENST00000254181 WDHD1O75717 1129 aaPredicted RBP9.14□□□□□ -0.95
USP29-201ENST00000254181 IBSPP21815 317 aaPredicted RBP9.14□□□□□ -0.95
USP29-201ENST00000254181 MSL3Q8N5Y2 521 aaKnown RBP9.14□□□□□ -0.95
USP29-201ENST00000254181 NUCB2P80303 420 aa9.14□□□□□ -0.95
USP29-201ENST00000254181 LRSAM1Q6UWE0 723 aa9.14□□□□□ -0.95
USP29-201ENST00000254181 RUSC2Q8N2Y8 1516 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 CARNS1A5YM72 827 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 LMAN1P49257 510 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 ZSCAN26Q16670 478 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 KIF18AQ8NI77 898 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 RWDD1Q9H446 243 aaPredicted RBP9.13□□□□□ -0.95
USP29-201ENST00000254181 METTL14Q9HCE5 456 aaKnown RBP9.13□□□□□ -0.95
USP29-201ENST00000254181 KIF16BQ96L93 1317 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 NEBLO76041 1014 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 ADCY5O95622 1261 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 IGHDP01880 384 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 KCNA1Q09470 495 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 ZRSR1Q15695 479 aaKnown RBP9.13□□□□□ -0.95
USP29-201ENST00000254181 ZRSR2Q15696 482 aaKnown RBP9.13□□□□□ -0.95
USP29-201ENST00000254181 PDLIM2Q96JY6 352 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 ST7Q9NRC1 585 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 RDXP35241 583 aaKnown RBP9.13□□□□□ -0.95
USP29-201ENST00000254181 HS6ST3Q8IZP7 471 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 PDZRN3Q9UPQ7 1066 aa9.13□□□□□ -0.95
USP29-201ENST00000254181 MYBBP1AQ9BQG0 1328 aaKnown RBP9.12□□□□□ -0.95
USP29-201ENST00000254181 NOP2P46087 812 aaKnown RBP9.12□□□□□ -0.95
USP29-201ENST00000254181 ARGLU1Q9NWB6 273 aaPredicted RBP9.12□□□□□ -0.95
USP29-201ENST00000254181 LIG1P18858 919 aa9.12□□□□□ -0.95
USP29-201ENST00000254181 NCBP1Q09161 790 aaKnown RBP9.12□□□□□ -0.95
USP29-201ENST00000254181 FKBP5Q13451 457 aaPredicted RBP9.12□□□□□ -0.95
USP29-201ENST00000254181 MFSD4BQ5TF39 518 aa9.11□□□□□ -0.95
USP29-201ENST00000254181 TPM1P09493 284 aa9.11□□□□□ -0.95
USP29-201ENST00000254181 USP8P40818 1118 aa9.11□□□□□ -0.95
USP29-201ENST00000254181 ANKRD7Q92527 254 aa9.11□□□□□ -0.95
USP29-201ENST00000254181 MORC2Q9Y6X9 1032 aaPredicted RBP9.11□□□□□ -0.95
USP29-201ENST00000254181 CGNL1Q0VF96 1302 aa9.11□□□□□ -0.95
USP29-201ENST00000254181 GOLGA2Q08379 1002 aa9.11□□□□□ -0.95
USP29-201ENST00000254181 NAA30Q147X3 362 aaPredicted RBP9.11□□□□□ -0.95
USP29-201ENST00000254181 NLRP13Q86W25 1043 aa9.11□□□□□ -0.95
USP29-201ENST00000254181 PRPF38AQ8NAV1 312 aaKnown RBP9.11□□□□□ -0.95
USP29-201ENST00000254181 L3MBTL2Q969R5 705 aa9.11□□□□□ -0.95
USP29-201ENST00000254181 CPSF2Q9P2I0 782 aaKnown RBP9.11□□□□□ -0.95
USP29-201ENST00000254181 RRP15Q9Y3B9 282 aaKnown RBP9.11□□□□□ -0.95
USP29-201ENST00000254181 RRBP1Q9P2E9 1410 aaKnown RBP9.11□□□□□ -0.95
USP29-201ENST00000254181 MBD3O95983 291 aa9.1□□□□□ -0.95
USP29-201ENST00000254181 TPM3P06753 285 aa9.1□□□□□ -0.95
USP29-201ENST00000254181 NAP1L1P55209 391 aaKnown RBP9.1□□□□□ -0.95
USP29-201ENST00000254181 PMM1Q92871 262 aa9.1□□□□□ -0.95
USP29-201ENST00000254181 RAI14Q9P0K7 980 aa9.1□□□□□ -0.95
USP29-201ENST00000254181 KNSTRNQ9Y448 316 aa9.1□□□□□ -0.95
USP29-201ENST00000254181 RPGRIP1LQ68CZ1 1315 aa9.1□□□□□ -0.95
USP29-201ENST00000254181 K7ELQ4 463 aaPredicted RBP9.1□□□□□ -0.95
USP29-201ENST00000254181 NBPF10Q6P3W6 841 aaKnown RBP9.1□□□□□ -0.95
USP29-201ENST00000254181 KCNV2Q8TDN2 545 aa9.1□□□□□ -0.95
USP29-201ENST00000254181 PES1O00541 588 aaKnown RBP9.1□□□□□ -0.95
USP29-201ENST00000254181 IRAK4Q9NWZ3 460 aa9.1□□□□□ -0.95
USP29-201ENST00000254181 REC8O95072 547 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms