RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 ANKRD36BQ8N2N9 1353 aa23.17■■□□□ 1.3
PPFIA1-201ENST00000253925 PLEKHH1Q9ULM0 1364 aa23.17■■□□□ 1.3
PPFIA1-201ENST00000253925 LETM1O95202 739 aaPredicted RBP23.17■■□□□ 1.3
PPFIA1-201ENST00000253925 WAPLQ7Z5K2 1190 aa23.17■■□□□ 1.3
PPFIA1-201ENST00000253925 AIMP1Q12904 312 aaKnown RBP23.17■■□□□ 1.3
PPFIA1-201ENST00000253925 ERC1Q8IUD2 1116 aa23.17■■□□□ 1.3
PPFIA1-201ENST00000253925 HIP1O00291 1037 aa23.16■■□□□ 1.3
PPFIA1-201ENST00000253925 SASS6Q6UVJ0 657 aa23.15■■□□□ 1.3
PPFIA1-201ENST00000253925 SPATA31E1Q6ZUB1 1445 aa23.15■■□□□ 1.3
PPFIA1-201ENST00000253925 MAGI3Q5TCQ9 1506 aa23.15■■□□□ 1.3
PPFIA1-201ENST00000253925 PDCP20941 246 aa23.15■■□□□ 1.3
PPFIA1-201ENST00000253925 FSD1Q9BTV5 496 aa23.15■■□□□ 1.3
PPFIA1-201ENST00000253925 C8orf34Q49A92 452 aa23.14■■□□□ 1.3
PPFIA1-201ENST00000253925 TSPY26PQ9H489 355 aa23.14■■□□□ 1.3
PPFIA1-201ENST00000253925 CPLX1O14810 134 aa23.14■■□□□ 1.29
PPFIA1-201ENST00000253925 R3HCC1Q9Y3T6 440 aaKnown RBP23.14■■□□□ 1.29
PPFIA1-201ENST00000253925 HDAC1Q13547 482 aaPredicted RBP23.14■■□□□ 1.29
PPFIA1-201ENST00000253925 PCDHB15Q9Y5E8 787 aa23.13■■□□□ 1.29
PPFIA1-201ENST00000253925 WDR33Q9C0J8 1336 aaKnown RBP23.13■■□□□ 1.29
PPFIA1-201ENST00000253925 BMP2KLQ5H9B9 411 aa23.13■■□□□ 1.29
PPFIA1-201ENST00000253925 EMILIN1Q9Y6C2 1016 aa23.13■■□□□ 1.29
PPFIA1-201ENST00000253925 NME9Q86XW9 330 aa23.12■■□□□ 1.29
PPFIA1-201ENST00000253925 TPM2P07951 284 aa23.12■■□□□ 1.29
PPFIA1-201ENST00000253925 INSRP06213 1382 aa23.12■■□□□ 1.29
PPFIA1-201ENST00000253925 CCDC73Q6ZRK6 1079 aa23.11■■□□□ 1.29
PPFIA1-201ENST00000253925 UBE2Q2Q8WVN8 375 aa23.11■■□□□ 1.29
PPFIA1-201ENST00000253925 TRAPPC8Q9Y2L5 1435 aa23.11■■□□□ 1.29
PPFIA1-201ENST00000253925 THEMISQ8N1K5 641 aaPredicted RBP23.11■■□□□ 1.29
PPFIA1-201ENST00000253925 NLRP2Q9NX02 1062 aa23.11■■□□□ 1.29
PPFIA1-201ENST00000253925 SYNE3Q6ZMZ3 975 aa23.1■■□□□ 1.29
PPFIA1-201ENST00000253925 DCTN1Q14203 1278 aa23.1■■□□□ 1.29
PPFIA1-201ENST00000253925 PUS7Q96PZ0 661 aaKnown RBP23.1■■□□□ 1.29
PPFIA1-201ENST00000253925 A2MP01023 1474 aa23.1■■□□□ 1.29
PPFIA1-201ENST00000253925 TRDNQ13061 729 aa23.1■■□□□ 1.29
PPFIA1-201ENST00000253925 MAP7D2Q96T17 732 aa23.09■■□□□ 1.29
PPFIA1-201ENST00000253925 NPC1L1Q9UHC9 1359 aa23.09■■□□□ 1.29
PPFIA1-201ENST00000253925 ESPNB1AK53 854 aa23.09■■□□□ 1.29
PPFIA1-201ENST00000253925 WASLO00401 505 aaPredicted RBP23.09■■□□□ 1.29
PPFIA1-201ENST00000253925 MCM10Q7L590 875 aa23.09■■□□□ 1.29
PPFIA1-201ENST00000253925 TPM3P06753 285 aa23.08■■□□□ 1.29
PPFIA1-201ENST00000253925 SLC26A8Q96RN1 970 aa23.08■■□□□ 1.29
PPFIA1-201ENST00000253925 NEUROD6Q96NK8 337 aa23.08■■□□□ 1.28
PPFIA1-201ENST00000253925 TRIM29Q14134 588 aa23.07■■□□□ 1.28
PPFIA1-201ENST00000253925 CYP46A1Q9Y6A2 500 aa23.07■■□□□ 1.28
PPFIA1-201ENST00000253925 FIBPO43427 364 aa23.07■■□□□ 1.28
PPFIA1-201ENST00000253925 RBM10P98175 930 aaKnown RBP23.06■■□□□ 1.28
PPFIA1-201ENST00000253925 ARHGAP45Q92619 1136 aa23.06■■□□□ 1.28
PPFIA1-201ENST00000253925 EXOC6BQ9Y2D4 811 aa23.06■■□□□ 1.28
PPFIA1-201ENST00000253925 SRGAP3O43295 1099 aa23.06■■□□□ 1.28
PPFIA1-201ENST00000253925 PBRM1Q86U86 1689 aa23.06■■□□□ 1.28
PPFIA1-201ENST00000253925 DENND4BO75064 1496 aaPredicted RBP23.06■■□□□ 1.28
PPFIA1-201ENST00000253925 RRP9O43818 475 aaKnown RBP23.06■■□□□ 1.28
PPFIA1-201ENST00000253925 CARD14Q9BXL6 1004 aa23.06■■□□□ 1.28
PPFIA1-201ENST00000253925 ZNF530Q6P9A1 599 aaPredicted RBP23.05■■□□□ 1.28
PPFIA1-201ENST00000253925 AKAP17AQ02040 695 aaKnown RBP23.05■■□□□ 1.28
PPFIA1-201ENST00000253925 AEBP1Q8IUX7 1158 aa23.05■■□□□ 1.28
PPFIA1-201ENST00000253925 RASSF8Q8NHQ8 419 aa23.05■■□□□ 1.28
PPFIA1-201ENST00000253925 ESCO1Q5FWF5 840 aa23.05■■□□□ 1.28
PPFIA1-201ENST00000253925 GNAT3A8MTJ3 354 aa23.05■■□□□ 1.28
PPFIA1-201ENST00000253925 EVA1CP58658 441 aa23.05■■□□□ 1.28
PPFIA1-201ENST00000253925 FYB1O15117 783 aa23.04■■□□□ 1.28
PPFIA1-201ENST00000253925 FBXO31Q5XUX0 539 aaPredicted RBP23.04■■□□□ 1.28
PPFIA1-201ENST00000253925 APPP05067 770 aa23.04■■□□□ 1.28
PPFIA1-201ENST00000253925 EIF4G3O43432 1585 aaKnown RBP23.03■■□□□ 1.28
PPFIA1-201ENST00000253925 IL1RAPL2Q9NP60 686 aa23.03■■□□□ 1.28
PPFIA1-201ENST00000253925 MTERF4Q7Z6M4 381 aaKnown RBP23.03■■□□□ 1.28
PPFIA1-201ENST00000253925 ZNF592Q92610 1267 aa23.03■■□□□ 1.28
PPFIA1-201ENST00000253925 TNPO1Q92973 898 aaKnown RBP23.03■■□□□ 1.28
PPFIA1-201ENST00000253925 PTPRCP08575 1304 aa23.03■■□□□ 1.28
PPFIA1-201ENST00000253925 MX1P20591 662 aa23.03■■□□□ 1.28
PPFIA1-201ENST00000253925 NUCB1Q02818 461 aa23.03■■□□□ 1.28
PPFIA1-201ENST00000253925 TULP1O00294 542 aaPredicted RBP23.02■■□□□ 1.28
PPFIA1-201ENST00000253925 TBC1D9Q6ZT07 1266 aa23.02■■□□□ 1.28
PPFIA1-201ENST00000253925 RALYLQ86SE5 291 aaKnown RBP23.02■■□□□ 1.28
PPFIA1-201ENST00000253925 ZMYM4Q5VZL5 1548 aa23.02■■□□□ 1.28
PPFIA1-201ENST00000253925 ANKRD1Q15327 319 aa23.02■■□□□ 1.28
PPFIA1-201ENST00000253925 MIS18AQ9NYP9 233 aa23.02■■□□□ 1.28
PPFIA1-201ENST00000253925 GTF2E1P29083 439 aaPredicted RBP23.01■■□□□ 1.27
PPFIA1-201ENST00000253925 MBIPQ9NS73 344 aa23.01■■□□□ 1.27
PPFIA1-201ENST00000253925 SMARCA5O60264 1052 aaPredicted RBP23.01■■□□□ 1.27
PPFIA1-201ENST00000253925 PPP6R1Q9UPN7 881 aa23■■□□□ 1.27
PPFIA1-201ENST00000253925 ATF3P18847 181 aa22.99■■□□□ 1.27
PPFIA1-201ENST00000253925 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
PPFIA1-201ENST00000253925 ZSCAN31Q96LW9 406 aaPredicted RBP22.99■■□□□ 1.27
PPFIA1-201ENST00000253925 WASHC4Q2M389 1173 aa22.98■■□□□ 1.27
PPFIA1-201ENST00000253925 KIF1BPQ96EK5 621 aa22.98■■□□□ 1.27
PPFIA1-201ENST00000253925 HOOK1Q9UJC3 728 aaKnown RBP22.98■■□□□ 1.27
PPFIA1-201ENST00000253925 RAB11FIP3O75154 756 aa22.98■■□□□ 1.27
PPFIA1-201ENST00000253925 MAP4K4O95819 1239 aaPredicted RBP22.98■■□□□ 1.27
PPFIA1-201ENST00000253925 RLBP1P12271 317 aa22.98■■□□□ 1.27
PPFIA1-201ENST00000253925 SPINK5Q9NQ38 1064 aaPredicted RBP22.98■■□□□ 1.27
PPFIA1-201ENST00000253925 NAT10Q9H0A0 1025 aaKnown RBP22.98■■□□□ 1.27
PPFIA1-201ENST00000253925 FOSBP53539 338 aa22.97■■□□□ 1.27
PPFIA1-201ENST00000253925 TPD52L1Q16890 204 aaPredicted RBP22.97■■□□□ 1.27
PPFIA1-201ENST00000253925 CREBRFQ8IUR6 639 aa22.97■■□□□ 1.27
PPFIA1-201ENST00000253925 KRT85P78386 507 aa22.97■■□□□ 1.27
PPFIA1-201ENST00000253925 HMGN5P82970 282 aaKnown RBP22.97■■□□□ 1.27
PPFIA1-201ENST00000253925 DNAJC2Q99543 621 aaKnown RBP22.97■■□□□ 1.27
PPFIA1-201ENST00000253925 SDF4Q9BRK5 362 aa22.97■■□□□ 1.27
PPFIA1-201ENST00000253925 SSFA2P28290 1259 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms