RNA–Protein interactions for RNA: ENST00000253408.10

GFAP-201, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 3,135 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-201ENST00000253408 SKOR2Q2VWA4 1001 aaPredicted RBP17.14■□□□□ 0.33
GFAP-201ENST00000253408 TPRNQ4KMQ1 711 aa17.14■□□□□ 0.33
GFAP-201ENST00000253408 NME9Q86XW9 330 aa17.14■□□□□ 0.33
GFAP-201ENST00000253408 CIZ1Q9ULV3 898 aaPredicted RBP17.14■□□□□ 0.33
GFAP-201ENST00000253408 NASPP49321 788 aaPredicted RBP17.14■□□□□ 0.33
GFAP-201ENST00000253408 HSP90AA2PQ14568 343 aaPredicted RBP17.14■□□□□ 0.33
GFAP-201ENST00000253408 KRT24Q2M2I5 525 aa17.14■□□□□ 0.33
GFAP-201ENST00000253408 ADGRB2O60241 1585 aa17.13■□□□□ 0.33
GFAP-201ENST00000253408 CAVIN1Q6NZI2 390 aaKnown RBP17.13■□□□□ 0.33
GFAP-201ENST00000253408 OTUD7AQ8TE49 926 aaPredicted RBP17.13■□□□□ 0.33
GFAP-201ENST00000253408 PUS7Q96PZ0 661 aaKnown RBP17.13■□□□□ 0.33
GFAP-201ENST00000253408 ZC3H13Q5T200 1668 aaKnown RBP17.12■□□□□ 0.33
GFAP-201ENST00000253408 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
GFAP-201ENST00000253408 NOL8Q76FK4 1167 aaKnown RBP17.12■□□□□ 0.33
GFAP-201ENST00000253408 NEURL4Q96JN8 1562 aa17.12■□□□□ 0.33
GFAP-201ENST00000253408 GSPT1P15170 499 aaKnown RBP17.12■□□□□ 0.33
GFAP-201ENST00000253408 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
GFAP-201ENST00000253408 CAMSAP1Q5T5Y3 1602 aa17.12■□□□□ 0.33
GFAP-201ENST00000253408 DDIT3P35638 169 aa17.12■□□□□ 0.33
GFAP-201ENST00000253408 NUTM2FA1L443 756 aa17.11■□□□□ 0.33
GFAP-201ENST00000253408 BAG4O95429 457 aaKnown RBP17.11■□□□□ 0.33
GFAP-201ENST00000253408 MLECQ14165 292 aa17.11■□□□□ 0.33
GFAP-201ENST00000253408 NCKAP5LQ9HCH0 1330 aa17.11■□□□□ 0.33
GFAP-201ENST00000253408 CHAMP1Q96JM3 812 aa17.1■□□□□ 0.33
GFAP-201ENST00000253408 ZBTB7CA1YPR0 619 aa17.1■□□□□ 0.33
GFAP-201ENST00000253408 SLC4A10Q6U841 1118 aa17.1■□□□□ 0.33
GFAP-201ENST00000253408 API5Q9BZZ5 524 aaKnown RBP17.1■□□□□ 0.33
GFAP-201ENST00000253408 PKP1Q13835 747 aa17.1■□□□□ 0.33
GFAP-201ENST00000253408 FOXD4L6Q3SYB3 417 aaPredicted RBP17.1■□□□□ 0.33
GFAP-201ENST00000253408 FOXD4L3Q6VB84 417 aaPredicted RBP17.1■□□□□ 0.33
GFAP-201ENST00000253408 PLEKHM2Q8IWE5 1019 aa17.09■□□□□ 0.33
GFAP-201ENST00000253408 COL3A1P02461 1466 aaPredicted RBP17.08■□□□□ 0.33
GFAP-201ENST00000253408 ARHGEF28Q8N1W1 1705 aaKnown RBP17.08■□□□□ 0.33
GFAP-201ENST00000253408 ABCC3O15438 1527 aa17.08■□□□□ 0.32
GFAP-201ENST00000253408 LMTK2Q8IWU2 1503 aa17.08■□□□□ 0.32
GFAP-201ENST00000253408 IFT57Q9NWB7 429 aa17.08■□□□□ 0.32
GFAP-201ENST00000253408 AK9Q5TCS8 1911 aa17.08■□□□□ 0.32
GFAP-201ENST00000253408 USP32Q8NFA0 1604 aa17.08■□□□□ 0.32
GFAP-201ENST00000253408 VSIG10Q8N0Z9 540 aa17.07■□□□□ 0.32
GFAP-201ENST00000253408 SLC52A1Q9NWF4 448 aa17.07■□□□□ 0.32
GFAP-201ENST00000253408 LRRC7Q96NW7 1537 aa17.07■□□□□ 0.32
GFAP-201ENST00000253408 PRPF40AO75400 957 aaKnown RBP17.07■□□□□ 0.32
GFAP-201ENST00000253408 MSNP26038 577 aaKnown RBP17.07■□□□□ 0.32
GFAP-201ENST00000253408 GLIPR1L2Q4G1C9 344 aa17.07■□□□□ 0.32
GFAP-201ENST00000253408 POGZQ7Z3K3 1410 aa17.07■□□□□ 0.32
GFAP-201ENST00000253408 NCOA3Q9Y6Q9 1424 aa17.07■□□□□ 0.32
GFAP-201ENST00000253408 CASC1Q6TDU7 716 aa17.07■□□□□ 0.32
GFAP-201ENST00000253408 RBM27Q9P2N5 1060 aaKnown RBP17.07■□□□□ 0.32
GFAP-201ENST00000253408 YTHDC2Q9H6S0 1430 aaKnown RBP17.07■□□□□ 0.32
GFAP-201ENST00000253408 MCM10Q7L590 875 aa17.06■□□□□ 0.32
GFAP-201ENST00000253408 ZGPATQ8N5A5 531 aaKnown RBP17.06■□□□□ 0.32
GFAP-201ENST00000253408 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
GFAP-201ENST00000253408 PTMSP20962 102 aa17.06■□□□□ 0.32
GFAP-201ENST00000253408 COG3Q96JB2 828 aa17.06■□□□□ 0.32
GFAP-201ENST00000253408 ISY1Q9ULR0 285 aaKnown RBP17.06■□□□□ 0.32
GFAP-201ENST00000253408 RABEP1Q15276 862 aa17.05■□□□□ 0.32
GFAP-201ENST00000253408 TSHZ3Q63HK5 1081 aa17.05■□□□□ 0.32
GFAP-201ENST00000253408 ZNF428Q96B54 188 aa17.05■□□□□ 0.32
GFAP-201ENST00000253408 TTC22Q5TAA0 569 aa17.05■□□□□ 0.32
GFAP-201ENST00000253408 INTS3Q68E01 1043 aaKnown RBP17.05■□□□□ 0.32
GFAP-201ENST00000253408 AEBP1Q8IUX7 1158 aa17.05■□□□□ 0.32
GFAP-201ENST00000253408 ARHGAP45Q92619 1136 aa17.05■□□□□ 0.32
GFAP-201ENST00000253408 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
GFAP-201ENST00000253408 NEXMIFQ5QGS0 1516 aa17.05■□□□□ 0.32
GFAP-201ENST00000253408 ABCC4O15439 1325 aa17.04■□□□□ 0.32
GFAP-201ENST00000253408 SDSP20132 328 aa17.04■□□□□ 0.32
GFAP-201ENST00000253408 SULT6B1Q6IMI4 303 aa17.04■□□□□ 0.32
GFAP-201ENST00000253408 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
GFAP-201ENST00000253408 LMOD3Q0VAK6 560 aa17.03■□□□□ 0.32
GFAP-201ENST00000253408 ARID3AQ99856 593 aa17.03■□□□□ 0.32
GFAP-201ENST00000253408 ST18O60284 1047 aa17.03■□□□□ 0.32
GFAP-201ENST00000253408 IL13P35225 146 aa17.03■□□□□ 0.32
GFAP-201ENST00000253408 CCDC173Q0VFZ6 552 aa17.03■□□□□ 0.32
GFAP-201ENST00000253408 FAM135BQ49AJ0 1406 aa17.03■□□□□ 0.32
GFAP-201ENST00000253408 FRMPD1Q5SYB0 1578 aa17.03■□□□□ 0.32
GFAP-201ENST00000253408 CD163L1Q9NR16 1453 aa17.02■□□□□ 0.32
GFAP-201ENST00000253408 KLHL40Q2TBA0 621 aa17.02■□□□□ 0.32
GFAP-201ENST00000253408 KIAA1211Q6ZU35 1233 aa17.02■□□□□ 0.32
GFAP-201ENST00000253408 NECTIN2Q92692 538 aa17.02■□□□□ 0.32
GFAP-201ENST00000253408 MEIS3Q99687 375 aa17.02■□□□□ 0.32
GFAP-201ENST00000253408 CFAP74Q9C0B2 1584 aa17.02■□□□□ 0.31
GFAP-201ENST00000253408 NUCB2P80303 420 aa17.01■□□□□ 0.31
GFAP-201ENST00000253408 RNF214Q8ND24 703 aa17.01■□□□□ 0.31
GFAP-201ENST00000253408 USP26Q9BXU7 913 aa17.01■□□□□ 0.31
GFAP-201ENST00000253408 DCTPP1Q9H773 170 aa17.01■□□□□ 0.31
GFAP-201ENST00000253408 PNPLA6Q8IY17 1366 aa17.01■□□□□ 0.31
GFAP-201ENST00000253408 F6X3S4 739 aa17.01■□□□□ 0.31
GFAP-201ENST00000253408 ZSCAN23Q3MJ62 389 aa17.01■□□□□ 0.31
GFAP-201ENST00000253408 SIGLEC1Q9BZZ2 1709 aa17■□□□□ 0.31
GFAP-201ENST00000253408 PTPRMP28827 1452 aa17■□□□□ 0.31
GFAP-201ENST00000253408 ZFYVE9O95405 1425 aa16.99■□□□□ 0.31
GFAP-201ENST00000253408 SLC4A2P04920 1241 aa16.99■□□□□ 0.31
GFAP-201ENST00000253408 RBM10P98175 930 aaKnown RBP16.99■□□□□ 0.31
GFAP-201ENST00000253408 HECW2Q9P2P5 1572 aa16.99■□□□□ 0.31
GFAP-201ENST00000253408 NEK4P51957 841 aa16.99■□□□□ 0.31
GFAP-201ENST00000253408 PTCH1Q13635 1447 aa16.99■□□□□ 0.31
GFAP-201ENST00000253408 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.99■□□□□ 0.31
GFAP-201ENST00000253408 RILPL2Q969X0 211 aa16.99■□□□□ 0.31
GFAP-201ENST00000253408 EXOC6BQ9Y2D4 811 aa16.99■□□□□ 0.31
GFAP-201ENST00000253408 MED14O60244 1454 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms