RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 DNTTIP2Q5QJE6 756 aaKnown RBP14.8□□□□□ -0.04
USHBP1-201ENST00000252597 FSD2A1L4K1 749 aa14.8□□□□□ -0.04
USHBP1-201ENST00000252597 KIAA1211Q6ZU35 1233 aa14.8□□□□□ -0.04
USHBP1-201ENST00000252597 LAMC1P11047 1609 aa14.8□□□□□ -0.04
USHBP1-201ENST00000252597 AAMPQ13685 434 aa14.79□□□□□ -0.04
USHBP1-201ENST00000252597 CDK19Q9BWU1 502 aa14.79□□□□□ -0.04
USHBP1-201ENST00000252597 ZNF428Q96B54 188 aa14.79□□□□□ -0.04
USHBP1-201ENST00000252597 GLI2P10070 1586 aa14.79□□□□□ -0.04
USHBP1-201ENST00000252597 NCKAP5LQ9HCH0 1330 aa14.79□□□□□ -0.04
USHBP1-201ENST00000252597 C8orf58Q8NAV2 365 aa14.78□□□□□ -0.04
USHBP1-201ENST00000252597 ZGPATQ8N5A5 531 aaKnown RBP14.78□□□□□ -0.04
USHBP1-201ENST00000252597 CDC45O75419 566 aa14.77□□□□□ -0.04
USHBP1-201ENST00000252597 TRIM6-TRIM34B2RNG4 842 aa14.77□□□□□ -0.04
USHBP1-201ENST00000252597 RILPL2Q969X0 211 aa14.77□□□□□ -0.04
USHBP1-201ENST00000252597 XPCQ01831 940 aaPredicted RBP14.77□□□□□ -0.05
USHBP1-201ENST00000252597 CCDC27Q2M243 656 aa14.77□□□□□ -0.05
USHBP1-201ENST00000252597 SYNMO15061 1565 aa14.77□□□□□ -0.05
USHBP1-201ENST00000252597 CAMSAP1Q5T5Y3 1602 aa14.76□□□□□ -0.05
USHBP1-201ENST00000252597 A0A1W2PP64 1363 aa14.76□□□□□ -0.05
USHBP1-201ENST00000252597 BAG4O95429 457 aaKnown RBP14.76□□□□□ -0.05
USHBP1-201ENST00000252597 NLRP1Q9C000 1473 aa14.76□□□□□ -0.05
USHBP1-201ENST00000252597 NME9Q86XW9 330 aa14.76□□□□□ -0.05
USHBP1-201ENST00000252597 MBIPQ9NS73 344 aa14.76□□□□□ -0.05
USHBP1-201ENST00000252597 LARP6Q9BRS8 491 aaKnown RBP14.76□□□□□ -0.05
USHBP1-201ENST00000252597 GDPD2Q9HCC8 539 aa14.76□□□□□ -0.05
USHBP1-201ENST00000252597 ADGRB3O60242 1522 aa14.75□□□□□ -0.05
USHBP1-201ENST00000252597 MYOM2P54296 1465 aa14.75□□□□□ -0.05
USHBP1-201ENST00000252597 BMP2KLQ5H9B9 411 aa14.75□□□□□ -0.05
USHBP1-201ENST00000252597 MCM10Q7L590 875 aa14.75□□□□□ -0.05
USHBP1-201ENST00000252597 ZMYND15Q9H091 742 aa14.75□□□□□ -0.05
USHBP1-201ENST00000252597 IQGAP1P46940 1657 aa14.75□□□□□ -0.05
USHBP1-201ENST00000252597 ZBTB7BO15156 539 aaPredicted RBP14.75□□□□□ -0.05
USHBP1-201ENST00000252597 SKOR2Q2VWA4 1001 aaPredicted RBP14.75□□□□□ -0.05
USHBP1-201ENST00000252597 CASC1Q6TDU7 716 aa14.75□□□□□ -0.05
USHBP1-201ENST00000252597 SIGLEC1Q9BZZ2 1709 aa14.75□□□□□ -0.05
USHBP1-201ENST00000252597 RAB3GAP1Q15042 981 aa14.74□□□□□ -0.05
USHBP1-201ENST00000252597 PHF23Q9BUL5 403 aaPredicted RBP14.74□□□□□ -0.05
USHBP1-201ENST00000252597 F6X3S4 739 aa14.74□□□□□ -0.05
USHBP1-201ENST00000252597 NEK4P51957 841 aa14.74□□□□□ -0.05
USHBP1-201ENST00000252597 PLEKHF1Q96S99 279 aa14.74□□□□□ -0.05
USHBP1-201ENST00000252597 SYCE3A1L190 88 aa14.74□□□□□ -0.05
USHBP1-201ENST00000252597 PKNOX2Q96KN3 472 aa14.74□□□□□ -0.05
USHBP1-201ENST00000252597 BCL11BQ9C0K0 894 aaPredicted RBP14.74□□□□□ -0.05
USHBP1-201ENST00000252597 VAMP4O75379 141 aa14.73□□□□□ -0.05
USHBP1-201ENST00000252597 ZNF692Q9BU19 519 aaPredicted RBP14.73□□□□□ -0.05
USHBP1-201ENST00000252597 SIRT2Q8IXJ6 389 aa14.73□□□□□ -0.05
USHBP1-201ENST00000252597 GCC1Q96CN9 775 aa14.73□□□□□ -0.05
USHBP1-201ENST00000252597 RBM25P49756 843 aaKnown RBP14.72□□□□□ -0.05
USHBP1-201ENST00000252597 EXOC6BQ9Y2D4 811 aa14.72□□□□□ -0.05
USHBP1-201ENST00000252597 KDM5AP29375 1690 aaKnown RBP14.72□□□□□ -0.05
USHBP1-201ENST00000252597 SLC52A1Q9NWF4 448 aa14.72□□□□□ -0.05
USHBP1-201ENST00000252597 RPGRIP1LQ68CZ1 1315 aa14.72□□□□□ -0.05
USHBP1-201ENST00000252597 GNAI1P63096 354 aa14.72□□□□□ -0.05
USHBP1-201ENST00000252597 UPF3BQ9BZI7 483 aaKnown RBP14.72□□□□□ -0.05
USHBP1-201ENST00000252597 ST18O60284 1047 aa14.71□□□□□ -0.05
USHBP1-201ENST00000252597 MAP4K4O95819 1239 aaPredicted RBP14.71□□□□□ -0.05
USHBP1-201ENST00000252597 GSPT1P15170 499 aaKnown RBP14.71□□□□□ -0.05
USHBP1-201ENST00000252597 ANO2Q9NQ90 1003 aa14.71□□□□□ -0.05
USHBP1-201ENST00000252597 AEBP1Q8IUX7 1158 aa14.71□□□□□ -0.05
USHBP1-201ENST00000252597 ANKRD36BQ8N2N9 1353 aa14.71□□□□□ -0.06
USHBP1-201ENST00000252597 NFE2L2Q16236 605 aa14.71□□□□□ -0.06
USHBP1-201ENST00000252597 SULT6B1Q6IMI4 303 aa14.71□□□□□ -0.06
USHBP1-201ENST00000252597 MRPL50Q8N5N7 158 aaKnown RBP14.71□□□□□ -0.06
USHBP1-201ENST00000252597 POLKQ9UBT6 870 aa14.71□□□□□ -0.06
USHBP1-201ENST00000252597 CT47B1P0C2W7 299 aaPredicted RBP14.7□□□□□ -0.06
USHBP1-201ENST00000252597 PRIM1P49642 420 aaKnown RBP14.7□□□□□ -0.06
USHBP1-201ENST00000252597 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.7□□□□□ -0.06
USHBP1-201ENST00000252597 KIF2CQ99661 725 aa14.7□□□□□ -0.06
USHBP1-201ENST00000252597 FCHSD2O94868 740 aa14.7□□□□□ -0.06
USHBP1-201ENST00000252597 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
USHBP1-201ENST00000252597 CHMP3Q9Y3E7 222 aa14.69□□□□□ -0.06
USHBP1-201ENST00000252597 MEIS3Q99687 375 aa14.69□□□□□ -0.06
USHBP1-201ENST00000252597 IFT172Q9UG01 1749 aa14.69□□□□□ -0.06
USHBP1-201ENST00000252597 SLC4A2P04920 1241 aa14.69□□□□□ -0.06
USHBP1-201ENST00000252597 SDSP20132 328 aa14.69□□□□□ -0.06
USHBP1-201ENST00000252597 INTS3Q68E01 1043 aaKnown RBP14.69□□□□□ -0.06
USHBP1-201ENST00000252597 SNX21Q969T3 373 aa14.69□□□□□ -0.06
USHBP1-201ENST00000252597 LTV1Q96GA3 475 aaPredicted RBP14.69□□□□□ -0.06
USHBP1-201ENST00000252597 API5Q9BZZ5 524 aaKnown RBP14.69□□□□□ -0.06
USHBP1-201ENST00000252597 CHMP4BQ9H444 224 aaKnown RBP14.69□□□□□ -0.06
USHBP1-201ENST00000252597 NEURL4Q96JN8 1562 aa14.69□□□□□ -0.06
USHBP1-201ENST00000252597 ZSCAN23Q3MJ62 389 aa14.68□□□□□ -0.06
USHBP1-201ENST00000252597 C14orf37Q86TY3 774 aa14.68□□□□□ -0.06
USHBP1-201ENST00000252597 PLEKHM2Q8IWE5 1019 aa14.68□□□□□ -0.06
USHBP1-201ENST00000252597 CCDC173Q0VFZ6 552 aa14.68□□□□□ -0.06
USHBP1-201ENST00000252597 RBSNQ9H1K0 784 aa14.68□□□□□ -0.06
USHBP1-201ENST00000252597 CIZ1Q9ULV3 898 aaPredicted RBP14.68□□□□□ -0.06
USHBP1-201ENST00000252597 ARHGAP31Q2M1Z3 1444 aa14.68□□□□□ -0.06
USHBP1-201ENST00000252597 NRXN1Q9ULB1 1477 aa14.68□□□□□ -0.06
USHBP1-201ENST00000252597 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.67□□□□□ -0.06
USHBP1-201ENST00000252597 ZSCAN30Q86W11 494 aa14.67□□□□□ -0.06
USHBP1-201ENST00000252597 COG3Q96JB2 828 aa14.67□□□□□ -0.06
USHBP1-201ENST00000252597 PPIP5K1Q6PFW1 1433 aa14.67□□□□□ -0.06
USHBP1-201ENST00000252597 PPLO60437 1756 aa14.67□□□□□ -0.06
USHBP1-201ENST00000252597 RABEP1Q15276 862 aa14.67□□□□□ -0.06
USHBP1-201ENST00000252597 ALDH1L2Q3SY69 923 aa14.67□□□□□ -0.06
USHBP1-201ENST00000252597 KIAA1210Q9ULL0 1709 aa14.67□□□□□ -0.06
USHBP1-201ENST00000252597 DDX54Q8TDD1 881 aaKnown RBP14.66□□□□□ -0.06
USHBP1-201ENST00000252597 ZNF830Q96NB3 372 aaPredicted RBP14.66□□□□□ -0.06
USHBP1-201ENST00000252597 NUCB2P80303 420 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms