RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 NFAT5O94916 1531 aa22.6■■□□□ 1.21
PCCB-201ENST00000251654 LTN1O94822 1766 aa22.6■■□□□ 1.21
PCCB-201ENST00000251654 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
PCCB-201ENST00000251654 FOXO3O43524 673 aa22.6■■□□□ 1.21
PCCB-201ENST00000251654 ATF3P18847 181 aa22.59■■□□□ 1.21
PCCB-201ENST00000251654 PHACTR3Q96KR7 559 aa22.59■■□□□ 1.21
PCCB-201ENST00000251654 DLG5Q8TDM6 1919 aa22.57■■□□□ 1.2
PCCB-201ENST00000251654 RIPK4P57078 832 aa22.57■■□□□ 1.2
PCCB-201ENST00000251654 PPP4R2Q9NY27 417 aa22.57■■□□□ 1.2
PCCB-201ENST00000251654 PHRF1Q9P1Y6 1649 aaKnown RBP22.56■■□□□ 1.2
PCCB-201ENST00000251654 MSH6P52701 1360 aa22.56■■□□□ 1.2
PCCB-201ENST00000251654 ALS2Q96Q42 1657 aa22.55■■□□□ 1.2
PCCB-201ENST00000251654 SLIT3O75094 1523 aa22.55■■□□□ 1.2
PCCB-201ENST00000251654 NEFMP07197 916 aa22.54■■□□□ 1.2
PCCB-201ENST00000251654 XPCQ01831 940 aaPredicted RBP22.54■■□□□ 1.2
PCCB-201ENST00000251654 CADPS2Q86UW7 1296 aa22.54■■□□□ 1.2
PCCB-201ENST00000251654 ZNF335Q9H4Z2 1342 aaPredicted RBP22.54■■□□□ 1.2
PCCB-201ENST00000251654 AMPHP49418 695 aa22.54■■□□□ 1.2
PCCB-201ENST00000251654 NFE2L2Q16236 605 aa22.54■■□□□ 1.2
PCCB-201ENST00000251654 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
PCCB-201ENST00000251654 ARHGEF10O15013 1369 aa22.54■■□□□ 1.2
PCCB-201ENST00000251654 RTL1A6NKG5 1358 aa22.53■■□□□ 1.2
PCCB-201ENST00000251654 HOXC9P31274 260 aa22.52■■□□□ 1.2
PCCB-201ENST00000251654 IL16Q14005 1332 aa22.52■■□□□ 1.2
PCCB-201ENST00000251654 SULT6B1Q6IMI4 303 aa22.52■■□□□ 1.2
PCCB-201ENST00000251654 KDRP35968 1356 aa22.51■■□□□ 1.19
PCCB-201ENST00000251654 PLIN1O60240 522 aa22.51■■□□□ 1.19
PCCB-201ENST00000251654 KRT28Q7Z3Y7 464 aa22.51■■□□□ 1.19
PCCB-201ENST00000251654 MYH16Q9H6N6 1097 aa22.51■■□□□ 1.19
PCCB-201ENST00000251654 USP19O94966 1318 aa22.49■■□□□ 1.19
PCCB-201ENST00000251654 IGSF1Q8N6C5 1336 aa22.49■■□□□ 1.19
PCCB-201ENST00000251654 KCNH5Q8NCM2 988 aa22.49■■□□□ 1.19
PCCB-201ENST00000251654 FANCIQ9NVI1 1328 aa22.49■■□□□ 1.19
PCCB-201ENST00000251654 EYA1Q99502 592 aa22.46■■□□□ 1.19
PCCB-201ENST00000251654 PXDNQ92626 1479 aa22.46■■□□□ 1.19
PCCB-201ENST00000251654 TSR2Q969E8 191 aaKnown RBP22.45■■□□□ 1.19
PCCB-201ENST00000251654 MED1Q15648 1581 aaPredicted RBP22.45■■□□□ 1.18
PCCB-201ENST00000251654 B4GALNT3Q6L9W6 998 aa22.45■■□□□ 1.18
PCCB-201ENST00000251654 NPHP3Q7Z494 1330 aa22.44■■□□□ 1.18
PCCB-201ENST00000251654 BCAR3O75815 825 aa22.44■■□□□ 1.18
PCCB-201ENST00000251654 GCP02774 474 aa22.44■■□□□ 1.18
PCCB-201ENST00000251654 EXOC6Q8TAG9 804 aa22.44■■□□□ 1.18
PCCB-201ENST00000251654 IP6K1Q92551 441 aa22.44■■□□□ 1.18
PCCB-201ENST00000251654 DDX17Q92841 729 aaKnown RBP22.44■■□□□ 1.18
PCCB-201ENST00000251654 C20orf194Q5TEA3 1177 aa22.43■■□□□ 1.18
PCCB-201ENST00000251654 LMOD2Q6P5Q4 547 aa22.42■■□□□ 1.18
PCCB-201ENST00000251654 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.42■■□□□ 1.18
PCCB-201ENST00000251654 RARSP54136 660 aaKnown RBP22.41■■□□□ 1.18
PCCB-201ENST00000251654 LMOD3Q0VAK6 560 aa22.41■■□□□ 1.18
PCCB-201ENST00000251654 ARHGEF25Q86VW2 580 aa22.41■■□□□ 1.18
PCCB-201ENST00000251654 THUMPD2Q9BTF0 503 aaKnown RBP22.41■■□□□ 1.18
PCCB-201ENST00000251654 CRYBG1Q9Y4K1 1723 aa22.41■■□□□ 1.18
PCCB-201ENST00000251654 PELP1Q8IZL8 1130 aaKnown RBP22.41■■□□□ 1.18
PCCB-201ENST00000251654 TNS3Q68CZ2 1445 aa22.4■■□□□ 1.18
PCCB-201ENST00000251654 CT47B1P0C2W7 299 aaPredicted RBP22.4■■□□□ 1.18
PCCB-201ENST00000251654 BRINP3Q76B58 766 aa22.4■■□□□ 1.18
PCCB-201ENST00000251654 CALD1Q05682 793 aaKnown RBP22.39■■□□□ 1.17
PCCB-201ENST00000251654 EXOSC9Q06265 439 aaKnown RBP22.38■■□□□ 1.17
PCCB-201ENST00000251654 RGPD2P0DJD1 1756 aa22.38■■□□□ 1.17
PCCB-201ENST00000251654 FAM83GA6ND36 823 aa22.38■■□□□ 1.17
PCCB-201ENST00000251654 CRBNQ96SW2 442 aa22.38■■□□□ 1.17
PCCB-201ENST00000251654 ZNF853P0CG23 659 aa22.37■■□□□ 1.17
PCCB-201ENST00000251654 LTV1Q96GA3 475 aaPredicted RBP22.36■■□□□ 1.17
PCCB-201ENST00000251654 IFT57Q9NWB7 429 aa22.36■■□□□ 1.17
PCCB-201ENST00000251654 CCDC136Q96JN2 1154 aa22.36■■□□□ 1.17
PCCB-201ENST00000251654 SLAIN2Q9P270 581 aa22.36■■□□□ 1.17
PCCB-201ENST00000251654 RGPD5Q99666 1765 aa22.35■■□□□ 1.17
PCCB-201ENST00000251654 SPATA31A3Q5VYP0 1347 aa22.35■■□□□ 1.17
PCCB-201ENST00000251654 CAMTA1Q9Y6Y1 1673 aa22.35■■□□□ 1.17
PCCB-201ENST00000251654 GNAI1P63096 354 aa22.34■■□□□ 1.17
PCCB-201ENST00000251654 DCTN1Q14203 1278 aa22.34■■□□□ 1.17
PCCB-201ENST00000251654 MTHFSDQ2M296 383 aaKnown RBP22.34■■□□□ 1.17
PCCB-201ENST00000251654 PLEKHG5O94827 1062 aa22.34■■□□□ 1.17
PCCB-201ENST00000251654 NCAPD2Q15021 1401 aa22.33■■□□□ 1.17
PCCB-201ENST00000251654 CFAP44Q96MT7 982 aa22.33■■□□□ 1.16
PCCB-201ENST00000251654 ZBTB7CA1YPR0 619 aa22.32■■□□□ 1.16
PCCB-201ENST00000251654 LRRC37A3O60309 1634 aa22.32■■□□□ 1.16
PCCB-201ENST00000251654 NBPF6Q5VWK0 638 aa22.31■■□□□ 1.16
PCCB-201ENST00000251654 NBPF4Q96M43 638 aa22.31■■□□□ 1.16
PCCB-201ENST00000251654 BCL2L13Q9BXK5 485 aa22.31■■□□□ 1.16
PCCB-201ENST00000251654 MBIPQ9NS73 344 aa22.31■■□□□ 1.16
PCCB-201ENST00000251654 LAS1LQ9Y4W2 734 aaKnown RBP22.31■■□□□ 1.16
PCCB-201ENST00000251654 COL18A1P39060 1754 aa22.31■■□□□ 1.16
PCCB-201ENST00000251654 NHSL1Q5SYE7 1610 aa22.31■■□□□ 1.16
PCCB-201ENST00000251654 PDE3AQ14432 1141 aa22.31■■□□□ 1.16
PCCB-201ENST00000251654 USHBP1Q8N6Y0 703 aa22.3■■□□□ 1.16
PCCB-201ENST00000251654 GAS2L2Q8NHY3 880 aa22.3■■□□□ 1.16
PCCB-201ENST00000251654 AXIN2Q9Y2T1 843 aa22.3■■□□□ 1.16
PCCB-201ENST00000251654 SOS2Q07890 1332 aaPredicted RBP22.3■■□□□ 1.16
PCCB-201ENST00000251654 MCM10Q7L590 875 aa22.29■■□□□ 1.16
PCCB-201ENST00000251654 CRB1P82279 1406 aa22.29■■□□□ 1.16
PCCB-201ENST00000251654 LMO7Q8WWI1 1683 aa22.29■■□□□ 1.16
PCCB-201ENST00000251654 ABCC6O95255 1503 aa22.28■■□□□ 1.16
PCCB-201ENST00000251654 ZC3H6P61129 1189 aaKnown RBP22.27■■□□□ 1.16
PCCB-201ENST00000251654 SSH1Q8WYL5 1049 aa22.27■■□□□ 1.16
PCCB-201ENST00000251654 FRAT1Q92837 279 aaPredicted RBP22.27■■□□□ 1.16
PCCB-201ENST00000251654 LRRC59Q96AG4 307 aaKnown RBP22.27■■□□□ 1.16
PCCB-201ENST00000251654 CANXP27824 592 aaKnown RBP22.27■■□□□ 1.15
PCCB-201ENST00000251654 CABLES1Q8TDN4 633 aa22.27■■□□□ 1.15
PCCB-201ENST00000251654 ERBB3P21860 1342 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms