RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CDCA7LQ96GN5 454 aa18.64■□□□□ 0.57
SDF2-201ENST00000247020 EIF4A2Q14240 407 aaKnown RBP18.63■□□□□ 0.57
SDF2-201ENST00000247020 DUSP27Q5VZP5 1158 aa18.63■□□□□ 0.57
SDF2-201ENST00000247020 USP19O94966 1318 aa18.63■□□□□ 0.57
SDF2-201ENST00000247020 ARHGEF10O15013 1369 aa18.62■□□□□ 0.57
SDF2-201ENST00000247020 TMPOP42166 694 aaKnown RBP18.61■□□□□ 0.57
SDF2-201ENST00000247020 PXDNQ92626 1479 aa18.61■□□□□ 0.57
SDF2-201ENST00000247020 AMPHP49418 695 aa18.6■□□□□ 0.57
SDF2-201ENST00000247020 FKBP8Q14318 412 aa18.6■□□□□ 0.57
SDF2-201ENST00000247020 DLG5Q8TDM6 1919 aa18.6■□□□□ 0.57
SDF2-201ENST00000247020 MED1Q15648 1581 aaPredicted RBP18.6■□□□□ 0.57
SDF2-201ENST00000247020 PRKAR2BP31323 418 aa18.59■□□□□ 0.57
SDF2-201ENST00000247020 CRYBG1Q9Y4K1 1723 aa18.59■□□□□ 0.57
SDF2-201ENST00000247020 HSP90AB2PQ58FF8 381 aa18.59■□□□□ 0.57
SDF2-201ENST00000247020 RCAN3Q9UKA8 241 aa18.59■□□□□ 0.57
SDF2-201ENST00000247020 TNS3Q68CZ2 1445 aa18.59■□□□□ 0.57
SDF2-201ENST00000247020 HOXC9P31274 260 aa18.58■□□□□ 0.56
SDF2-201ENST00000247020 KDRP35968 1356 aa18.58■□□□□ 0.56
SDF2-201ENST00000247020 NHSL1Q5SYE7 1610 aa18.58■□□□□ 0.56
SDF2-201ENST00000247020 NUTM2GQ5VZR2 741 aa18.58■□□□□ 0.56
SDF2-201ENST00000247020 ABCC6O95255 1503 aa18.57■□□□□ 0.56
SDF2-201ENST00000247020 IL16Q14005 1332 aa18.57■□□□□ 0.56
SDF2-201ENST00000247020 SOX12O15370 315 aa18.56■□□□□ 0.56
SDF2-201ENST00000247020 RRP7AQ9Y3A4 280 aaKnown RBP18.56■□□□□ 0.56
SDF2-201ENST00000247020 IGSF1Q8N6C5 1336 aa18.56■□□□□ 0.56
SDF2-201ENST00000247020 HMOX1P09601 288 aa18.55■□□□□ 0.56
SDF2-201ENST00000247020 NEUROD2Q15784 382 aa18.55■□□□□ 0.56
SDF2-201ENST00000247020 NFE2L2Q16236 605 aa18.55■□□□□ 0.56
SDF2-201ENST00000247020 IP6K1Q92551 441 aa18.55■□□□□ 0.56
SDF2-201ENST00000247020 BRINP3Q76B58 766 aa18.55■□□□□ 0.56
SDF2-201ENST00000247020 SLAIN2Q9P270 581 aa18.55■□□□□ 0.56
SDF2-201ENST00000247020 LTBP4Q8N2S1 1624 aa18.54■□□□□ 0.56
SDF2-201ENST00000247020 GCP02774 474 aa18.54■□□□□ 0.56
SDF2-201ENST00000247020 RIPK4P57078 832 aa18.54■□□□□ 0.56
SDF2-201ENST00000247020 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
SDF2-201ENST00000247020 MYH16Q9H6N6 1097 aa18.54■□□□□ 0.56
SDF2-201ENST00000247020 TRIM35Q9UPQ4 493 aa18.54■□□□□ 0.56
SDF2-201ENST00000247020 XPCQ01831 940 aaPredicted RBP18.53■□□□□ 0.56
SDF2-201ENST00000247020 SPINK5Q9NQ38 1064 aaPredicted RBP18.53■□□□□ 0.56
SDF2-201ENST00000247020 CAMTA1Q9Y6Y1 1673 aa18.53■□□□□ 0.56
SDF2-201ENST00000247020 SPATA31A3Q5VYP0 1347 aa18.52■□□□□ 0.56
SDF2-201ENST00000247020 SULT6B1Q6IMI4 303 aa18.52■□□□□ 0.56
SDF2-201ENST00000247020 ARHGEF25Q86VW2 580 aa18.52■□□□□ 0.56
SDF2-201ENST00000247020 RRP1P56182 461 aaKnown RBP18.51■□□□□ 0.55
SDF2-201ENST00000247020 CALD1Q05682 793 aaKnown RBP18.51■□□□□ 0.55
SDF2-201ENST00000247020 SOS2Q07890 1332 aaPredicted RBP18.51■□□□□ 0.55
SDF2-201ENST00000247020 PHACTR3Q96KR7 559 aa18.51■□□□□ 0.55
SDF2-201ENST00000247020 FAM208AQ9UK61 1670 aaKnown RBP18.5■□□□□ 0.55
SDF2-201ENST00000247020 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
SDF2-201ENST00000247020 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
SDF2-201ENST00000247020 EYA1Q99502 592 aa18.49■□□□□ 0.55
SDF2-201ENST00000247020 NCAPD2Q15021 1401 aa18.48■□□□□ 0.55
SDF2-201ENST00000247020 COL18A1P39060 1754 aa18.48■□□□□ 0.55
SDF2-201ENST00000247020 AEBP1Q8IUX7 1158 aa18.47■□□□□ 0.55
SDF2-201ENST00000247020 ABCA3Q99758 1704 aa18.47■□□□□ 0.55
SDF2-201ENST00000247020 RGPD5Q99666 1765 aa18.47■□□□□ 0.55
SDF2-201ENST00000247020 RGPD2P0DJD1 1756 aa18.46■□□□□ 0.55
SDF2-201ENST00000247020 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.46■□□□□ 0.55
SDF2-201ENST00000247020 LMO7Q8WWI1 1683 aa18.46■□□□□ 0.54
SDF2-201ENST00000247020 CPDO75976 1380 aa18.45■□□□□ 0.54
SDF2-201ENST00000247020 DDX17Q92841 729 aaKnown RBP18.45■□□□□ 0.54
SDF2-201ENST00000247020 AHDC1Q5TGY3 1603 aaPredicted RBP18.45■□□□□ 0.54
SDF2-201ENST00000247020 GAS2L2Q8NHY3 880 aa18.44■□□□□ 0.54
SDF2-201ENST00000247020 ROBO1Q9Y6N7 1651 aa18.44■□□□□ 0.54
SDF2-201ENST00000247020 FANCIQ9NVI1 1328 aa18.43■□□□□ 0.54
SDF2-201ENST00000247020 PLEKHG2Q9H7P9 1386 aa18.43■□□□□ 0.54
SDF2-201ENST00000247020 GNAI1P63096 354 aa18.42■□□□□ 0.54
SDF2-201ENST00000247020 IFT57Q9NWB7 429 aa18.42■□□□□ 0.54
SDF2-201ENST00000247020 PPP4R2Q9NY27 417 aa18.42■□□□□ 0.54
SDF2-201ENST00000247020 LRRC37A3O60309 1634 aa18.42■□□□□ 0.54
SDF2-201ENST00000247020 HTATSF1O43719 755 aaKnown RBP18.42■□□□□ 0.54
SDF2-201ENST00000247020 IRX6P78412 446 aaPredicted RBP18.42■□□□□ 0.54
SDF2-201ENST00000247020 ZNF853P0CG23 659 aa18.39■□□□□ 0.53
SDF2-201ENST00000247020 ANKRD24Q8TF21 1146 aa18.38■□□□□ 0.53
SDF2-201ENST00000247020 ZNF428Q96B54 188 aa18.38■□□□□ 0.53
SDF2-201ENST00000247020 LTV1Q96GA3 475 aaPredicted RBP18.38■□□□□ 0.53
SDF2-201ENST00000247020 CFAP44Q96MT7 982 aa18.38■□□□□ 0.53
SDF2-201ENST00000247020 ERBB3P21860 1342 aa18.38■□□□□ 0.53
SDF2-201ENST00000247020 COL22A1Q8NFW1 1626 aaPredicted RBP18.38■□□□□ 0.53
SDF2-201ENST00000247020 NBPF6Q5VWK0 638 aa18.38■□□□□ 0.53
SDF2-201ENST00000247020 NBPF4Q96M43 638 aa18.38■□□□□ 0.53
SDF2-201ENST00000247020 MTHFSDQ2M296 383 aaKnown RBP18.37■□□□□ 0.53
SDF2-201ENST00000247020 ZBTB7CA1YPR0 619 aa18.36■□□□□ 0.53
SDF2-201ENST00000247020 RARSP54136 660 aaKnown RBP18.36■□□□□ 0.53
SDF2-201ENST00000247020 ZC3H6P61129 1189 aaKnown RBP18.35■□□□□ 0.53
SDF2-201ENST00000247020 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
SDF2-201ENST00000247020 EXOSC9Q06265 439 aaKnown RBP18.34■□□□□ 0.53
SDF2-201ENST00000247020 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
SDF2-201ENST00000247020 RTF1Q92541 710 aaKnown RBP18.34■□□□□ 0.53
SDF2-201ENST00000247020 AXIN2Q9Y2T1 843 aa18.34■□□□□ 0.53
SDF2-201ENST00000247020 VIRMAQ69YN4 1812 aaKnown RBP18.34■□□□□ 0.53
SDF2-201ENST00000247020 KIAA0232Q92628 1395 aa18.34■□□□□ 0.53
SDF2-201ENST00000247020 MAP3K5Q99683 1374 aa18.34■□□□□ 0.53
SDF2-201ENST00000247020 CRB1P82279 1406 aa18.33■□□□□ 0.53
SDF2-201ENST00000247020 GNAT3A8MTJ3 354 aa18.33■□□□□ 0.52
SDF2-201ENST00000247020 AMOTQ4VCS5 1084 aa18.33■□□□□ 0.52
SDF2-201ENST00000247020 FAM83GA6ND36 823 aa18.32■□□□□ 0.52
SDF2-201ENST00000247020 PDE3AQ14432 1141 aa18.32■□□□□ 0.52
SDF2-201ENST00000247020 ALDH1L2Q3SY69 923 aa18.32■□□□□ 0.52
SDF2-201ENST00000247020 CABLES1Q8TDN4 633 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms