RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 C1orf167Q5SNV9 1468 aa17.94■□□□□ 0.46
SNRNP27-201ENST00000244227 BCAR3O75815 825 aa17.93■□□□□ 0.46
SNRNP27-201ENST00000244227 PSME1Q06323 249 aa17.93■□□□□ 0.46
SNRNP27-201ENST00000244227 NCOA3Q9Y6Q9 1424 aa17.93■□□□□ 0.46
SNRNP27-201ENST00000244227 RGPD1P0DJD0 1748 aa17.93■□□□□ 0.46
SNRNP27-201ENST00000244227 AEBP1Q8IUX7 1158 aa17.93■□□□□ 0.46
SNRNP27-201ENST00000244227 MYH16Q9H6N6 1097 aa17.93■□□□□ 0.46
SNRNP27-201ENST00000244227 STRCQ7RTU9 1775 aa17.92■□□□□ 0.46
SNRNP27-201ENST00000244227 NEFMP07197 916 aa17.91■□□□□ 0.46
SNRNP27-201ENST00000244227 CRBNQ96SW2 442 aa17.91■□□□□ 0.46
SNRNP27-201ENST00000244227 FANCIQ9NVI1 1328 aa17.91■□□□□ 0.46
SNRNP27-201ENST00000244227 FOXO3O43524 673 aa17.91■□□□□ 0.46
SNRNP27-201ENST00000244227 SULT6B1Q6IMI4 303 aa17.91■□□□□ 0.46
SNRNP27-201ENST00000244227 KIF24Q5T7B8 1368 aa17.91■□□□□ 0.46
SNRNP27-201ENST00000244227 AMPHP49418 695 aa17.9■□□□□ 0.46
SNRNP27-201ENST00000244227 MST1RQ04912 1400 aa17.9■□□□□ 0.46
SNRNP27-201ENST00000244227 RARSP54136 660 aaKnown RBP17.89■□□□□ 0.45
SNRNP27-201ENST00000244227 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.89■□□□□ 0.45
SNRNP27-201ENST00000244227 TSR2Q969E8 191 aaKnown RBP17.89■□□□□ 0.45
SNRNP27-201ENST00000244227 CCDC136Q96JN2 1154 aa17.89■□□□□ 0.45
SNRNP27-201ENST00000244227 HOXC9P31274 260 aa17.88■□□□□ 0.45
SNRNP27-201ENST00000244227 DCCP43146 1447 aa17.88■□□□□ 0.45
SNRNP27-201ENST00000244227 ARHGEF10O15013 1369 aa17.88■□□□□ 0.45
SNRNP27-201ENST00000244227 NFAT5O94916 1531 aa17.87■□□□□ 0.45
SNRNP27-201ENST00000244227 XPCQ01831 940 aaPredicted RBP17.87■□□□□ 0.45
SNRNP27-201ENST00000244227 ATF3P18847 181 aa17.86■□□□□ 0.45
SNRNP27-201ENST00000244227 EYA1Q99502 592 aa17.86■□□□□ 0.45
SNRNP27-201ENST00000244227 KIF1AQ12756 1690 aa17.86■□□□□ 0.45
SNRNP27-201ENST00000244227 TRPM3Q9HCF6 1732 aaPredicted RBP17.86■□□□□ 0.45
SNRNP27-201ENST00000244227 EXOSC9Q06265 439 aaKnown RBP17.86■□□□□ 0.45
SNRNP27-201ENST00000244227 KRT28Q7Z3Y7 464 aa17.86■□□□□ 0.45
SNRNP27-201ENST00000244227 IGSF1Q8N6C5 1336 aa17.86■□□□□ 0.45
SNRNP27-201ENST00000244227 KDRP35968 1356 aa17.85■□□□□ 0.45
SNRNP27-201ENST00000244227 CT47B1P0C2W7 299 aaPredicted RBP17.85■□□□□ 0.45
SNRNP27-201ENST00000244227 THUMPD2Q9BTF0 503 aaKnown RBP17.85■□□□□ 0.45
SNRNP27-201ENST00000244227 TSHZ2Q9NRE2 1034 aa17.85■□□□□ 0.45
SNRNP27-201ENST00000244227 RTL1A6NKG5 1358 aa17.84■□□□□ 0.45
SNRNP27-201ENST00000244227 DLG5Q8TDM6 1919 aa17.83■□□□□ 0.45
SNRNP27-201ENST00000244227 ZNF853P0CG23 659 aa17.83■□□□□ 0.44
SNRNP27-201ENST00000244227 KCNH5Q8NCM2 988 aa17.83■□□□□ 0.44
SNRNP27-201ENST00000244227 LMOD3Q0VAK6 560 aa17.82■□□□□ 0.44
SNRNP27-201ENST00000244227 CADPS2Q86UW7 1296 aa17.82■□□□□ 0.44
SNRNP27-201ENST00000244227 IP6K1Q92551 441 aa17.82■□□□□ 0.44
SNRNP27-201ENST00000244227 SLIT3O75094 1523 aa17.82■□□□□ 0.44
SNRNP27-201ENST00000244227 XIRP1Q702N8 1843 aaKnown RBP17.82■□□□□ 0.44
SNRNP27-201ENST00000244227 FAM83GA6ND36 823 aa17.82■□□□□ 0.44
SNRNP27-201ENST00000244227 USP19O94966 1318 aa17.81■□□□□ 0.44
SNRNP27-201ENST00000244227 CALD1Q05682 793 aaKnown RBP17.81■□□□□ 0.44
SNRNP27-201ENST00000244227 PDE3AQ14432 1141 aa17.81■□□□□ 0.44
SNRNP27-201ENST00000244227 IFT57Q9NWB7 429 aa17.81■□□□□ 0.44
SNRNP27-201ENST00000244227 LTN1O94822 1766 aa17.81■□□□□ 0.44
SNRNP27-201ENST00000244227 MSH6P52701 1360 aa17.8■□□□□ 0.44
SNRNP27-201ENST00000244227 GCP02774 474 aa17.8■□□□□ 0.44
SNRNP27-201ENST00000244227 ZNF335Q9H4Z2 1342 aaPredicted RBP17.79■□□□□ 0.44
SNRNP27-201ENST00000244227 DCTN1Q14203 1278 aa17.79■□□□□ 0.44
SNRNP27-201ENST00000244227 BCL2L13Q9BXK5 485 aa17.79■□□□□ 0.44
SNRNP27-201ENST00000244227 PHRF1Q9P1Y6 1649 aaKnown RBP17.79■□□□□ 0.44
SNRNP27-201ENST00000244227 GNAI1P63096 354 aa17.79■□□□□ 0.44
SNRNP27-201ENST00000244227 MTHFSDQ2M296 383 aaKnown RBP17.78■□□□□ 0.44
SNRNP27-201ENST00000244227 ARHGEF25Q86VW2 580 aa17.78■□□□□ 0.44
SNRNP27-201ENST00000244227 DDX17Q92841 729 aaKnown RBP17.78■□□□□ 0.44
SNRNP27-201ENST00000244227 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
SNRNP27-201ENST00000244227 LAS1LQ9Y4W2 734 aaKnown RBP17.78■□□□□ 0.44
SNRNP27-201ENST00000244227 ALS2Q96Q42 1657 aa17.78■□□□□ 0.44
SNRNP27-201ENST00000244227 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.44
SNRNP27-201ENST00000244227 MBIPQ9NS73 344 aa17.77■□□□□ 0.44
SNRNP27-201ENST00000244227 LMOD2Q6P5Q4 547 aa17.77■□□□□ 0.43
SNRNP27-201ENST00000244227 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.43
SNRNP27-201ENST00000244227 FRAT1Q92837 279 aaPredicted RBP17.77■□□□□ 0.43
SNRNP27-201ENST00000244227 TNNQ9UQP3 1299 aa17.77■□□□□ 0.43
SNRNP27-201ENST00000244227 PANK1Q8TE04 598 aa17.76■□□□□ 0.43
SNRNP27-201ENST00000244227 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
SNRNP27-201ENST00000244227 MED1Q15648 1581 aaPredicted RBP17.74■□□□□ 0.43
SNRNP27-201ENST00000244227 NPHP3Q7Z494 1330 aa17.74■□□□□ 0.43
SNRNP27-201ENST00000244227 VAMP4O75379 141 aa17.74■□□□□ 0.43
SNRNP27-201ENST00000244227 RLBP1P12271 317 aa17.74■□□□□ 0.43
SNRNP27-201ENST00000244227 MCM10Q7L590 875 aa17.74■□□□□ 0.43
SNRNP27-201ENST00000244227 NBPF6Q5VWK0 638 aa17.73■□□□□ 0.43
SNRNP27-201ENST00000244227 TSPYL6Q8N831 410 aa17.73■□□□□ 0.43
SNRNP27-201ENST00000244227 NBPF4Q96M43 638 aa17.73■□□□□ 0.43
SNRNP27-201ENST00000244227 SMC4Q9NTJ3 1288 aa17.73■□□□□ 0.43
SNRNP27-201ENST00000244227 PXDNQ92626 1479 aa17.73■□□□□ 0.43
SNRNP27-201ENST00000244227 CRB1P82279 1406 aa17.73■□□□□ 0.43
SNRNP27-201ENST00000244227 ALDH1L2Q3SY69 923 aa17.72■□□□□ 0.43
SNRNP27-201ENST00000244227 COG6Q9Y2V7 657 aa17.72■□□□□ 0.43
SNRNP27-201ENST00000244227 ZBTB7CA1YPR0 619 aa17.72■□□□□ 0.43
SNRNP27-201ENST00000244227 CHL1O00533 1208 aa17.72■□□□□ 0.43
SNRNP27-201ENST00000244227 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
SNRNP27-201ENST00000244227 BRINP3Q76B58 766 aa17.72■□□□□ 0.43
SNRNP27-201ENST00000244227 USHBP1Q8N6Y0 703 aa17.72■□□□□ 0.43
SNRNP27-201ENST00000244227 GAS2L2Q8NHY3 880 aa17.72■□□□□ 0.43
SNRNP27-201ENST00000244227 ZNF428Q96B54 188 aa17.72■□□□□ 0.43
SNRNP27-201ENST00000244227 ZKSCAN2Q63HK3 967 aa17.71■□□□□ 0.43
SNRNP27-201ENST00000244227 KDM2BQ8NHM5 1336 aa17.71■□□□□ 0.43
SNRNP27-201ENST00000244227 BRPF1P55201 1214 aaPredicted RBP17.7■□□□□ 0.42
SNRNP27-201ENST00000244227 C8orf58Q8NAV2 365 aa17.7■□□□□ 0.42
SNRNP27-201ENST00000244227 AXIN2Q9Y2T1 843 aa17.7■□□□□ 0.42
SNRNP27-201ENST00000244227 TNS3Q68CZ2 1445 aa17.7■□□□□ 0.42
SNRNP27-201ENST00000244227 SPATA31A3Q5VYP0 1347 aa17.69■□□□□ 0.42
SNRNP27-201ENST00000244227 NCAPD2Q15021 1401 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms