RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 NEUROD2Q15784 382 aa31.14■■■□□ 2.58
RRP9-201ENST00000232888 TRPM3Q9HCF6 1732 aaPredicted RBP31.14■■■□□ 2.58
RRP9-201ENST00000232888 HSP90AB2PQ58FF8 381 aa31.13■■■□□ 2.57
RRP9-201ENST00000232888 SOX12O15370 315 aa31.13■■■□□ 2.57
RRP9-201ENST00000232888 NUTM2GQ5VZR2 741 aa31.13■■■□□ 2.57
RRP9-201ENST00000232888 NPHP3Q7Z494 1330 aa31.12■■■□□ 2.57
RRP9-201ENST00000232888 ARHGEF10O15013 1369 aa31.09■■■□□ 2.57
RRP9-201ENST00000232888 NFAT5O94916 1531 aa31.09■■■□□ 2.57
RRP9-201ENST00000232888 HMOX1P09601 288 aa31.09■■■□□ 2.57
RRP9-201ENST00000232888 SLIT3O75094 1523 aa31.08■■■□□ 2.57
RRP9-201ENST00000232888 USP19O94966 1318 aa31.07■■■□□ 2.56
RRP9-201ENST00000232888 IL16Q14005 1332 aa31.07■■■□□ 2.56
RRP9-201ENST00000232888 RGPD1P0DJD0 1748 aa31.07■■■□□ 2.56
RRP9-201ENST00000232888 HOXC9P31274 260 aa31.07■■■□□ 2.56
RRP9-201ENST00000232888 RIPK4P57078 832 aa31.07■■■□□ 2.56
RRP9-201ENST00000232888 NFE2L2Q16236 605 aa31.07■■■□□ 2.56
RRP9-201ENST00000232888 SPINK5Q9NQ38 1064 aaPredicted RBP31.07■■■□□ 2.56
RRP9-201ENST00000232888 MYH16Q9H6N6 1097 aa31.05■■■□□ 2.56
RRP9-201ENST00000232888 TRIM35Q9UPQ4 493 aa31.05■■■□□ 2.56
RRP9-201ENST00000232888 XPCQ01831 940 aaPredicted RBP31.05■■■□□ 2.56
RRP9-201ENST00000232888 RRP1P56182 461 aaKnown RBP31.04■■■□□ 2.56
RRP9-201ENST00000232888 IP6K1Q92551 441 aa31.04■■■□□ 2.56
RRP9-201ENST00000232888 PHRF1Q9P1Y6 1649 aaKnown RBP31.03■■■□□ 2.56
RRP9-201ENST00000232888 LMOD3Q0VAK6 560 aa31.02■■■□□ 2.56
RRP9-201ENST00000232888 SULT6B1Q6IMI4 303 aa31.02■■■□□ 2.56
RRP9-201ENST00000232888 PHACTR3Q96KR7 559 aa31.02■■■□□ 2.56
RRP9-201ENST00000232888 ALS2Q96Q42 1657 aa31.02■■■□□ 2.56
RRP9-201ENST00000232888 GCP02774 474 aa31.01■■■□□ 2.56
RRP9-201ENST00000232888 SLAIN2Q9P270 581 aa31.01■■■□□ 2.56
RRP9-201ENST00000232888 CALD1Q05682 793 aaKnown RBP31■■■□□ 2.55
RRP9-201ENST00000232888 IGSF1Q8N6C5 1336 aa31■■■□□ 2.55
RRP9-201ENST00000232888 KDRP35968 1356 aa31■■■□□ 2.55
RRP9-201ENST00000232888 BRINP3Q76B58 766 aa30.99■■■□□ 2.55
RRP9-201ENST00000232888 IRX6P78412 446 aaPredicted RBP30.98■■■□□ 2.55
RRP9-201ENST00000232888 PXDNQ92626 1479 aa30.98■■■□□ 2.55
RRP9-201ENST00000232888 LMOD2Q6P5Q4 547 aa30.97■■■□□ 2.55
RRP9-201ENST00000232888 LTN1O94822 1766 aa30.96■■■□□ 2.55
RRP9-201ENST00000232888 TNS3Q68CZ2 1445 aa30.96■■■□□ 2.55
RRP9-201ENST00000232888 ARHGEF25Q86VW2 580 aa30.96■■■□□ 2.55
RRP9-201ENST00000232888 EYA1Q99502 592 aa30.96■■■□□ 2.55
RRP9-201ENST00000232888 AEBP1Q8IUX7 1158 aa30.95■■■□□ 2.54
RRP9-201ENST00000232888 PPP4R2Q9NY27 417 aa30.94■■■□□ 2.54
RRP9-201ENST00000232888 SPATA31A3Q5VYP0 1347 aa30.93■■■□□ 2.54
RRP9-201ENST00000232888 CT47B1P0C2W7 299 aaPredicted RBP30.93■■■□□ 2.54
RRP9-201ENST00000232888 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.92■■■□□ 2.54
RRP9-201ENST00000232888 SOS2Q07890 1332 aaPredicted RBP30.89■■■□□ 2.53
RRP9-201ENST00000232888 DDX17Q92841 729 aaKnown RBP30.88■■■□□ 2.53
RRP9-201ENST00000232888 MED1Q15648 1581 aaPredicted RBP30.87■■■□□ 2.53
RRP9-201ENST00000232888 FANCIQ9NVI1 1328 aa30.86■■■□□ 2.53
RRP9-201ENST00000232888 GAS2L2Q8NHY3 880 aa30.84■■■□□ 2.53
RRP9-201ENST00000232888 IFT57Q9NWB7 429 aa30.84■■■□□ 2.53
RRP9-201ENST00000232888 ABCC6O95255 1503 aa30.83■■■□□ 2.53
RRP9-201ENST00000232888 GNAI1P63096 354 aa30.83■■■□□ 2.53
RRP9-201ENST00000232888 PELP1Q8IZL8 1130 aaKnown RBP30.82■■■□□ 2.52
RRP9-201ENST00000232888 LTV1Q96GA3 475 aaPredicted RBP30.82■■■□□ 2.52
RRP9-201ENST00000232888 DLG5Q8TDM6 1919 aa30.8■■■□□ 2.52
RRP9-201ENST00000232888 HTATSF1O43719 755 aaKnown RBP30.79■■■□□ 2.52
RRP9-201ENST00000232888 ZNF853P0CG23 659 aa30.79■■■□□ 2.52
RRP9-201ENST00000232888 LTBP4Q8N2S1 1624 aa30.79■■■□□ 2.52
RRP9-201ENST00000232888 ZBTB7CA1YPR0 619 aa30.78■■■□□ 2.52
RRP9-201ENST00000232888 RARSP54136 660 aaKnown RBP30.78■■■□□ 2.52
RRP9-201ENST00000232888 TSR2Q969E8 191 aaKnown RBP30.78■■■□□ 2.52
RRP9-201ENST00000232888 CPDO75976 1380 aa30.78■■■□□ 2.52
RRP9-201ENST00000232888 NCAPD2Q15021 1401 aa30.78■■■□□ 2.52
RRP9-201ENST00000232888 CFAP44Q96MT7 982 aa30.77■■■□□ 2.52
RRP9-201ENST00000232888 MTHFSDQ2M296 383 aaKnown RBP30.76■■■□□ 2.52
RRP9-201ENST00000232888 CRYBG1Q9Y4K1 1723 aa30.75■■■□□ 2.51
RRP9-201ENST00000232888 NHSL1Q5SYE7 1610 aa30.75■■■□□ 2.51
RRP9-201ENST00000232888 NBPF6Q5VWK0 638 aa30.75■■■□□ 2.51
RRP9-201ENST00000232888 ANKRD24Q8TF21 1146 aa30.75■■■□□ 2.51
RRP9-201ENST00000232888 ZNF428Q96B54 188 aa30.75■■■□□ 2.51
RRP9-201ENST00000232888 NBPF4Q96M43 638 aa30.75■■■□□ 2.51
RRP9-201ENST00000232888 PLIN1O60240 522 aa30.75■■■□□ 2.51
RRP9-201ENST00000232888 EXOSC9Q06265 439 aaKnown RBP30.75■■■□□ 2.51
RRP9-201ENST00000232888 ZC3H6P61129 1189 aaKnown RBP30.74■■■□□ 2.51
RRP9-201ENST00000232888 BCAR3O75815 825 aa30.72■■■□□ 2.51
RRP9-201ENST00000232888 RTF1Q92541 710 aaKnown RBP30.72■■■□□ 2.51
RRP9-201ENST00000232888 THUMPD2Q9BTF0 503 aaKnown RBP30.72■■■□□ 2.51
RRP9-201ENST00000232888 CAMTA1Q9Y6Y1 1673 aa30.71■■■□□ 2.51
RRP9-201ENST00000232888 PLEKHG5O94827 1062 aa30.71■■■□□ 2.51
RRP9-201ENST00000232888 AXIN2Q9Y2T1 843 aa30.71■■■□□ 2.51
RRP9-201ENST00000232888 FAM83GA6ND36 823 aa30.7■■■□□ 2.5
RRP9-201ENST00000232888 PDE3AQ14432 1141 aa30.7■■■□□ 2.5
RRP9-201ENST00000232888 ERBB3P21860 1342 aa30.69■■■□□ 2.5
RRP9-201ENST00000232888 LAS1LQ9Y4W2 734 aaKnown RBP30.69■■■□□ 2.5
RRP9-201ENST00000232888 EXOC6Q8TAG9 804 aa30.68■■■□□ 2.5
RRP9-201ENST00000232888 COL18A1P39060 1754 aa30.67■■■□□ 2.5
RRP9-201ENST00000232888 GNAT3A8MTJ3 354 aa30.67■■■□□ 2.5
RRP9-201ENST00000232888 CABLES1Q8TDN4 633 aa30.67■■■□□ 2.5
RRP9-201ENST00000232888 MBIPQ9NS73 344 aa30.67■■■□□ 2.5
RRP9-201ENST00000232888 CHL1O00533 1208 aa30.66■■■□□ 2.5
RRP9-201ENST00000232888 DCTN1Q14203 1278 aa30.66■■■□□ 2.5
RRP9-201ENST00000232888 AMOTQ4VCS5 1084 aa30.66■■■□□ 2.5
RRP9-201ENST00000232888 USHBP1Q8N6Y0 703 aa30.66■■■□□ 2.5
RRP9-201ENST00000232888 PLEKHG2Q9H7P9 1386 aa30.66■■■□□ 2.5
RRP9-201ENST00000232888 MAP3K5Q99683 1374 aa30.65■■■□□ 2.5
RRP9-201ENST00000232888 ALDH1L2Q3SY69 923 aa30.65■■■□□ 2.5
RRP9-201ENST00000232888 LRRC59Q96AG4 307 aaKnown RBP30.65■■■□□ 2.5
RRP9-201ENST00000232888 CRB1P82279 1406 aa30.65■■■□□ 2.5
RRP9-201ENST00000232888 PLEKHO1Q53GL0 409 aaPredicted RBP30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms