RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 ATAD2Q6PL18 1390 aa20.6■□□□□ 0.89
RAB35-201ENST00000229340 GDPD2Q9HCC8 539 aa20.6■□□□□ 0.89
RAB35-201ENST00000229340 NOL8Q76FK4 1167 aaKnown RBP20.59■□□□□ 0.89
RAB35-201ENST00000229340 OTUD7AQ8TE49 926 aaPredicted RBP20.59■□□□□ 0.89
RAB35-201ENST00000229340 PLEKHF1Q96S99 279 aa20.59■□□□□ 0.89
RAB35-201ENST00000229340 TSPY26PQ9H489 355 aa20.59■□□□□ 0.89
RAB35-201ENST00000229340 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.89
RAB35-201ENST00000229340 CHGAP10645 457 aaKnown RBP20.58■□□□□ 0.88
RAB35-201ENST00000229340 NOLC1Q14978 699 aaKnown RBP eCLIP20.58■□□□□ 0.88
RAB35-201ENST00000229340 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.88
RAB35-201ENST00000229340 PLEKHM2Q8IWE5 1019 aa20.58■□□□□ 0.88
RAB35-201ENST00000229340 BBXQ8WY36 941 aaPredicted RBP20.58■□□□□ 0.88
RAB35-201ENST00000229340 ABCC11Q96J66 1382 aa20.58■□□□□ 0.88
RAB35-201ENST00000229340 USP25Q9UHP3 1055 aa20.57■□□□□ 0.88
RAB35-201ENST00000229340 CWC22Q9HCG8 908 aaKnown RBP20.57■□□□□ 0.88
RAB35-201ENST00000229340 ST18O60284 1047 aa20.57■□□□□ 0.88
RAB35-201ENST00000229340 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
RAB35-201ENST00000229340 THUMPD2Q9BTF0 503 aaKnown RBP20.56■□□□□ 0.88
RAB35-201ENST00000229340 UGGT1Q9NYU2 1555 aa20.55■□□□□ 0.88
RAB35-201ENST00000229340 PLCB2Q00722 1185 aa20.55■□□□□ 0.88
RAB35-201ENST00000229340 BCL2L12Q9HB09 334 aa20.55■□□□□ 0.88
RAB35-201ENST00000229340 KIF3AQ9Y496 699 aa20.55■□□□□ 0.88
RAB35-201ENST00000229340 TRPM2O94759 1503 aa20.55■□□□□ 0.88
RAB35-201ENST00000229340 GGNBP2Q9H3C7 697 aa20.54■□□□□ 0.88
RAB35-201ENST00000229340 STAC3Q96MF2 364 aa20.54■□□□□ 0.88
RAB35-201ENST00000229340 ABCA6Q8N139 1617 aa20.54■□□□□ 0.88
RAB35-201ENST00000229340 PIBF1Q8WXW3 757 aa20.54■□□□□ 0.88
RAB35-201ENST00000229340 GADD45BO75293 160 aaPredicted RBP20.53■□□□□ 0.88
RAB35-201ENST00000229340 TSPYL6Q8N831 410 aa20.53■□□□□ 0.88
RAB35-201ENST00000229340 U2AF2P26368 475 aaKnown RBP eCLIP20.53■□□□□ 0.88
RAB35-201ENST00000229340 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
RAB35-201ENST00000229340 TTC22Q5TAA0 569 aa20.53■□□□□ 0.88
RAB35-201ENST00000229340 PRIMPOLQ96LW4 560 aa20.53■□□□□ 0.88
RAB35-201ENST00000229340 ADGRB2O60241 1585 aa20.52■□□□□ 0.88
RAB35-201ENST00000229340 GTPBP4Q9BZE4 634 aaKnown RBP20.52■□□□□ 0.88
RAB35-201ENST00000229340 SMARCA5O60264 1052 aaPredicted RBP20.52■□□□□ 0.88
RAB35-201ENST00000229340 MBD3O95983 291 aa20.52■□□□□ 0.88
RAB35-201ENST00000229340 HMGN5P82970 282 aaKnown RBP20.51■□□□□ 0.87
RAB35-201ENST00000229340 INTS3Q68E01 1043 aaKnown RBP20.51■□□□□ 0.87
RAB35-201ENST00000229340 ALDH1L2Q3SY69 923 aa20.5■□□□□ 0.87
RAB35-201ENST00000229340 PDCL2Q8N4E4 241 aa20.5■□□□□ 0.87
RAB35-201ENST00000229340 SDSP20132 328 aa20.5■□□□□ 0.87
RAB35-201ENST00000229340 NEK4P51957 841 aa20.5■□□□□ 0.87
RAB35-201ENST00000229340 AFAP1Q8N556 730 aa20.5■□□□□ 0.87
RAB35-201ENST00000229340 ADCY5O95622 1261 aa20.5■□□□□ 0.87
RAB35-201ENST00000229340 ERCC6L2Q5T890 1561 aa20.49■□□□□ 0.87
RAB35-201ENST00000229340 GTF2E1P29083 439 aaPredicted RBP20.49■□□□□ 0.87
RAB35-201ENST00000229340 CABP2Q9NPB3 220 aa20.49■□□□□ 0.87
RAB35-201ENST00000229340 TMX3Q96JJ7 454 aa20.48■□□□□ 0.87
RAB35-201ENST00000229340 KIF20AO95235 890 aa20.48■□□□□ 0.87
RAB35-201ENST00000229340 MRPL50Q8N5N7 158 aaKnown RBP20.48■□□□□ 0.87
RAB35-201ENST00000229340 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.47■□□□□ 0.876e-7■■■■■ 27.3
RAB35-201ENST00000229340 GTF2F1P35269 517 aaKnown RBP eCLIP20.47■□□□□ 0.878e-9■■■□□ 14.8
RAB35-201ENST00000229340 MAP3K4Q9Y6R4 1608 aa20.47■□□□□ 0.87
RAB35-201ENST00000229340 LETM1O95202 739 aaPredicted RBP20.47■□□□□ 0.87
RAB35-201ENST00000229340 HCLS1P14317 486 aaPredicted RBP20.47■□□□□ 0.87
RAB35-201ENST00000229340 IL16Q14005 1332 aa20.46■□□□□ 0.87
RAB35-201ENST00000229340 TRAPPC8Q9Y2L5 1435 aa20.46■□□□□ 0.87
RAB35-201ENST00000229340 MED14O60244 1454 aa20.46■□□□□ 0.87
RAB35-201ENST00000229340 ZBTB22O15209 634 aa20.46■□□□□ 0.87
RAB35-201ENST00000229340 NCBP3Q53F19 620 aaKnown RBP20.46■□□□□ 0.87
RAB35-201ENST00000229340 BCL11BQ9C0K0 894 aaPredicted RBP20.46■□□□□ 0.87
RAB35-201ENST00000229340 ADGRL1O94910 1474 aa20.46■□□□□ 0.87
RAB35-201ENST00000229340 RIOK3O14730 519 aaKnown RBP20.45■□□□□ 0.86
RAB35-201ENST00000229340 VAMP4O75379 141 aa20.45■□□□□ 0.86
RAB35-201ENST00000229340 TCHHQ07283 1943 aa20.45■□□□□ 0.86
RAB35-201ENST00000229340 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
RAB35-201ENST00000229340 KIAA1210Q9ULL0 1709 aa20.45■□□□□ 0.86
RAB35-201ENST00000229340 KIF3BO15066 747 aa20.45■□□□□ 0.86
RAB35-201ENST00000229340 NUTM2DQ5VT03 806 aaPredicted RBP20.45■□□□□ 0.86
RAB35-201ENST00000229340 FKBP5Q13451 457 aaPredicted RBP20.44■□□□□ 0.86
RAB35-201ENST00000229340 KLHL34Q8N239 644 aa20.44■□□□□ 0.86
RAB35-201ENST00000229340 CGNQ9P2M7 1197 aaKnown RBP20.44■□□□□ 0.86
RAB35-201ENST00000229340 SPAG9O60271 1321 aaKnown RBP20.44■□□□□ 0.86
RAB35-201ENST00000229340 FBLN1P23142 703 aa20.44■□□□□ 0.86
RAB35-201ENST00000229340 SYAP1Q96A49 352 aaPredicted RBP20.44■□□□□ 0.86
RAB35-201ENST00000229340 PPRC1Q5VV67 1664 aaKnown RBP20.44■□□□□ 0.86
RAB35-201ENST00000229340 BRD1O95696 1058 aa20.43■□□□□ 0.86
RAB35-201ENST00000229340 PDE4CQ08493 712 aa20.43■□□□□ 0.86
RAB35-201ENST00000229340 USP48Q86UV5 1035 aa20.43■□□□□ 0.86
RAB35-201ENST00000229340 SBNO2Q9Y2G9 1366 aa20.43■□□□□ 0.86
RAB35-201ENST00000229340 CASC1Q6TDU7 716 aa20.43■□□□□ 0.86
RAB35-201ENST00000229340 ZNF771Q7L3S4 317 aaPredicted RBP20.43■□□□□ 0.86
RAB35-201ENST00000229340 SPC24Q8NBT2 197 aa20.42■□□□□ 0.86
RAB35-201ENST00000229340 PYCARDQ9ULZ3 195 aa20.42■□□□□ 0.86
RAB35-201ENST00000229340 VGLL3A8MV65 326 aa20.41■□□□□ 0.86
RAB35-201ENST00000229340 DCTPP1Q9H773 170 aa20.41■□□□□ 0.86
RAB35-201ENST00000229340 CHMP4BQ9H444 224 aaKnown RBP20.41■□□□□ 0.86
RAB35-201ENST00000229340 PRKAR2BP31323 418 aa20.4■□□□□ 0.86
RAB35-201ENST00000229340 HMOX1P09601 288 aa20.4■□□□□ 0.86
RAB35-201ENST00000229340 TSHZ3Q63HK5 1081 aa20.4■□□□□ 0.86
RAB35-201ENST00000229340 DIAPH1O60610 1272 aaKnown RBP20.4■□□□□ 0.86
RAB35-201ENST00000229340 REC8O95072 547 aa20.4■□□□□ 0.86
RAB35-201ENST00000229340 SPTLC3Q9NUV7 552 aa20.39■□□□□ 0.85
RAB35-201ENST00000229340 ABCC4O15439 1325 aa20.39■□□□□ 0.85
RAB35-201ENST00000229340 QRICH2Q9H0J4 1663 aa20.38■□□□□ 0.85
RAB35-201ENST00000229340 ERC2O15083 957 aa20.38■□□□□ 0.85
RAB35-201ENST00000229340 DTNBO60941 627 aa20.38■□□□□ 0.85
RAB35-201ENST00000229340 EFCAB2Q5VUJ9 269 aa20.38■□□□□ 0.85
RAB35-201ENST00000229340 PALD1Q9ULE6 856 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms