RNA–Protein interactions for RNA: ENST00000225719.8

CPD-201, Transcript of carboxypeptidase D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPD, Length 9,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-201ENST00000225719 CDK5RAP3Q96JB5 506 aa18.19■□□□□ 0.5
CPD-201ENST00000225719 SWAP70Q9UH65 585 aa18.19■□□□□ 0.5
CPD-201ENST00000225719 CCDC9Q9Y3X0 531 aaKnown RBP18.19■□□□□ 0.5
CPD-201ENST00000225719 RRBP1Q9P2E9 1410 aaKnown RBP18.19■□□□□ 0.5
CPD-201ENST00000225719 ARHGAP29Q52LW3 1261 aa18.19■□□□□ 0.5
CPD-201ENST00000225719 SFPQP23246 707 aaKnown RBP eCLIP18.19■□□□□ 0.5
CPD-201ENST00000225719 KRT222Q8N1A0 295 aa18.18■□□□□ 0.5
CPD-201ENST00000225719 FBXW7Q969H0 707 aa18.18■□□□□ 0.5
CPD-201ENST00000225719 BACH2Q9BYV9 841 aa18.18■□□□□ 0.5
CPD-201ENST00000225719 ZNF397Q8NF99 534 aaPredicted RBP18.18■□□□□ 0.5
CPD-201ENST00000225719 SKIDA1Q1XH10 827 aa18.18■□□□□ 0.5
CPD-201ENST00000225719 BBXQ8WY36 941 aaPredicted RBP18.18■□□□□ 0.5
CPD-201ENST00000225719 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
CPD-201ENST00000225719 CCDC175P0C221 793 aa18.18■□□□□ 0.5
CPD-201ENST00000225719 KIF5CO60282 957 aa18.18■□□□□ 0.5
CPD-201ENST00000225719 EPB41L2O43491 1005 aaKnown RBP18.18■□□□□ 0.5
CPD-201ENST00000225719 WWC2Q6AWC2 1192 aa18.18■□□□□ 0.5
CPD-201ENST00000225719 FAM114A1Q8IWE2 563 aa18.17■□□□□ 0.5
CPD-201ENST00000225719 CCDC7Q96M83 1385 aa18.17■□□□□ 0.5
CPD-201ENST00000225719 UBTFL1P0CB47 393 aaPredicted RBP18.17■□□□□ 0.5
CPD-201ENST00000225719 BMS1Q14692 1282 aaKnown RBP18.17■□□□□ 0.5
CPD-201ENST00000225719 LRRFIP2Q9Y608 721 aaKnown RBP18.17■□□□□ 0.5
CPD-201ENST00000225719 MCM4P33991 863 aa18.17■□□□□ 0.5
CPD-201ENST00000225719 EVA1CP58658 441 aa18.17■□□□□ 0.5
CPD-201ENST00000225719 GNAI3P08754 354 aa18.16■□□□□ 0.5
CPD-201ENST00000225719 CASQ1P31415 396 aa18.16■□□□□ 0.5
CPD-201ENST00000225719 GSDMDP57764 484 aa18.16■□□□□ 0.5
CPD-201ENST00000225719 C6orf163Q5TEZ5 329 aa18.16■□□□□ 0.5
CPD-201ENST00000225719 TICAM2Q86XR7 235 aa18.16■□□□□ 0.5
CPD-201ENST00000225719 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
CPD-201ENST00000225719 WASHC2AQ641Q2 1341 aa18.16■□□□□ 0.5
CPD-201ENST00000225719 CBX1P83916 185 aa18.16■□□□□ 0.5
CPD-201ENST00000225719 ELL2O00472 640 aaPredicted RBP18.16■□□□□ 0.5
CPD-201ENST00000225719 RBM28Q9NW13 759 aaKnown RBP18.16■□□□□ 0.5
CPD-201ENST00000225719 ANKRD62A6NC57 917 aa18.16■□□□□ 0.5
CPD-201ENST00000225719 DESP17661 470 aa18.16■□□□□ 0.5
CPD-201ENST00000225719 PDE3AQ14432 1141 aa18.16■□□□□ 0.5
CPD-201ENST00000225719 ANKRD18BA2A2Z9 1011 aa18.15■□□□□ 0.5
CPD-201ENST00000225719 FAM193AP78312 1265 aa18.15■□□□□ 0.5
CPD-201ENST00000225719 TUBB4AP04350 444 aa18.15■□□□□ 0.5
CPD-201ENST00000225719 TBC1D2BQ9UPU7 963 aa18.15■□□□□ 0.5
CPD-201ENST00000225719 RAD21O60216 631 aa18.15■□□□□ 0.5
CPD-201ENST00000225719 FHOD3Q2V2M9 1422 aa18.15■□□□□ 0.5
CPD-201ENST00000225719 HNRNPMP52272 730 aaKnown RBP eCLIP18.15■□□□□ 0.51e-6■■■■□ 22.9
CPD-201ENST00000225719 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.15■□□□□ 0.55e-7■■■□□ 17.2
CPD-201ENST00000225719 V9GYY5 206 aaPredicted RBP18.15■□□□□ 0.5
CPD-201ENST00000225719 PPP4R3BQ5MIZ7 849 aa18.14■□□□□ 0.5
CPD-201ENST00000225719 HSPA4P34932 840 aa18.14■□□□□ 0.49
CPD-201ENST00000225719 STK38Q15208 465 aa18.14■□□□□ 0.49
CPD-201ENST00000225719 SRCIN1Q9C0H9 1055 aa18.14■□□□□ 0.49
CPD-201ENST00000225719 CECR2Q9BXF3 1484 aa18.14■□□□□ 0.49
CPD-201ENST00000225719 EIF2S2P20042 333 aaKnown RBP18.14■□□□□ 0.49
CPD-201ENST00000225719 FIBPO43427 364 aa18.13■□□□□ 0.49
CPD-201ENST00000225719 FYB1O15117 783 aa18.13■□□□□ 0.49
CPD-201ENST00000225719 ANKS4BQ8N8V4 417 aa18.13■□□□□ 0.49
CPD-201ENST00000225719 MAP3K11Q16584 847 aa18.13■□□□□ 0.49
CPD-201ENST00000225719 NUP62CLQ9H1M0 184 aa18.13■□□□□ 0.49
CPD-201ENST00000225719 IPO4Q8TEX9 1081 aaKnown RBP18.13■□□□□ 0.49
CPD-201ENST00000225719 DDX12PQ92771 950 aa18.13■□□□□ 0.49
CPD-201ENST00000225719 FBXO3Q9UK99 471 aa18.13■□□□□ 0.49
CPD-201ENST00000225719 TSPYL4Q9UJ04 414 aa18.12■□□□□ 0.49
CPD-201ENST00000225719 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.12■□□□□ 0.49
CPD-201ENST00000225719 TAF4BQ92750 862 aa18.12■□□□□ 0.49
CPD-201ENST00000225719 UPF3BQ9BZI7 483 aaKnown RBP18.12■□□□□ 0.49
CPD-201ENST00000225719 CDKL5O76039 1030 aa18.12■□□□□ 0.49
CPD-201ENST00000225719 NEK4P51957 841 aa18.12■□□□□ 0.49
CPD-201ENST00000225719 NAA15Q9BXJ9 866 aaKnown RBP18.11■□□□□ 0.49
CPD-201ENST00000225719 DAAM2Q86T65 1068 aa18.11■□□□□ 0.49
CPD-201ENST00000225719 SMG6Q86US8 1419 aaKnown RBP18.11■□□□□ 0.49
CPD-201ENST00000225719 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
CPD-201ENST00000225719 CCDC183Q5T5S1 534 aa18.11■□□□□ 0.49
CPD-201ENST00000225719 TAOK3Q9H2K8 898 aa18.11■□□□□ 0.49
CPD-201ENST00000225719 FYCO1Q9BQS8 1478 aa18.11■□□□□ 0.49
CPD-201ENST00000225719 PAIP2Q9BPZ3 127 aaKnown RBP18.11■□□□□ 0.49
CPD-201ENST00000225719 CCDC30Q5VVM6 783 aa18.1■□□□□ 0.49
CPD-201ENST00000225719 TDO2P48775 406 aa18.1■□□□□ 0.49
CPD-201ENST00000225719 SMARCC1Q92922 1105 aaPredicted RBP18.1■□□□□ 0.49
CPD-201ENST00000225719 TMCO5BA8MYB1 307 aa18.1■□□□□ 0.49
CPD-201ENST00000225719 TRIM22Q8IYM9 498 aa18.1■□□□□ 0.49
CPD-201ENST00000225719 WASHC4Q2M389 1173 aa18.1■□□□□ 0.49
CPD-201ENST00000225719 EHBP1Q8NDI1 1231 aa18.09■□□□□ 0.49
CPD-201ENST00000225719 CTAGE5O15320 804 aa18.09■□□□□ 0.49
CPD-201ENST00000225719 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
CPD-201ENST00000225719 POLA1P09884 1462 aaPredicted RBP18.09■□□□□ 0.49
CPD-201ENST00000225719 ME1P48163 572 aa18.09■□□□□ 0.49
CPD-201ENST00000225719 CETN2P41208 172 aa18.09■□□□□ 0.49
CPD-201ENST00000225719 CYP46A1Q9Y6A2 500 aa18.09■□□□□ 0.49
CPD-201ENST00000225719 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.08■□□□□ 0.49
CPD-201ENST00000225719 DDX46Q7L014 1031 aaKnown RBP18.08■□□□□ 0.48
CPD-201ENST00000225719 FMNL2Q96PY5 1086 aa18.08■□□□□ 0.48
CPD-201ENST00000225719 KIF20AO95235 890 aa18.08■□□□□ 0.48
CPD-201ENST00000225719 PRDM10Q9NQV6 1147 aa18.08■□□□□ 0.48
CPD-201ENST00000225719 CCDC27Q2M243 656 aa18.07■□□□□ 0.48
CPD-201ENST00000225719 ZHX1Q9UKY1 873 aaPredicted RBP18.07■□□□□ 0.48
CPD-201ENST00000225719 FSD1Q9BTV5 496 aa18.07■□□□□ 0.48
CPD-201ENST00000225719 NSRP1Q9H0G5 558 aaKnown RBP18.07■□□□□ 0.48
CPD-201ENST00000225719 ZSCAN31Q96LW9 406 aaPredicted RBP18.07■□□□□ 0.48
CPD-201ENST00000225719 BCL11BQ9C0K0 894 aaPredicted RBP18.07■□□□□ 0.48
CPD-201ENST00000225719 SPATA32Q96LK8 384 aa18.07■□□□□ 0.48
CPD-201ENST00000225719 CCDC171Q6TFL3 1326 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms