RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 GNAI2P04899 355 aa12.01□□□□□ -0.49
CRX-201ENST00000221996 RBM33Q96EV2 1170 aaKnown RBP12.01□□□□□ -0.49
CRX-201ENST00000221996 NAP1L5Q96NT1 182 aaPredicted RBP12.01□□□□□ -0.49
CRX-201ENST00000221996 DDX49Q9Y6V7 483 aaKnown RBP12.01□□□□□ -0.49
CRX-201ENST00000221996 MLH3Q9UHC1 1453 aa12□□□□□ -0.49
CRX-201ENST00000221996 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
CRX-201ENST00000221996 CLTCL1P53675 1640 aa12□□□□□ -0.49
CRX-201ENST00000221996 CCT4P50991 539 aaKnown RBP12□□□□□ -0.49
CRX-201ENST00000221996 ANKLE2Q86XL3 938 aa12□□□□□ -0.49
CRX-201ENST00000221996 TET3O43151 1660 aa12□□□□□ -0.49
CRX-201ENST00000221996 TTC21BQ7Z4L5 1316 aa12□□□□□ -0.49
CRX-201ENST00000221996 NLRP2Q9NX02 1062 aa12□□□□□ -0.49
CRX-201ENST00000221996 TAOK2Q9UL54 1235 aa12□□□□□ -0.49
CRX-201ENST00000221996 TRIM35Q9UPQ4 493 aa11.99□□□□□ -0.49
CRX-201ENST00000221996 SURF6O75683 361 aaKnown RBP11.99□□□□□ -0.49
CRX-201ENST00000221996 RAPGEF4Q8WZA2 1011 aa11.99□□□□□ -0.49
CRX-201ENST00000221996 ARAP3Q8WWN8 1544 aa11.99□□□□□ -0.49
CRX-201ENST00000221996 ZMYM3Q14202 1370 aa11.99□□□□□ -0.49
CRX-201ENST00000221996 XPCQ01831 940 aaPredicted RBP11.99□□□□□ -0.49
CRX-201ENST00000221996 AIMP1Q12904 312 aaKnown RBP11.99□□□□□ -0.49
CRX-201ENST00000221996 FOXD4L6Q3SYB3 417 aaPredicted RBP11.99□□□□□ -0.49
CRX-201ENST00000221996 FOXD4L3Q6VB84 417 aaPredicted RBP11.99□□□□□ -0.49
CRX-201ENST00000221996 RPAP2Q8IXW5 612 aaPredicted RBP11.99□□□□□ -0.49
CRX-201ENST00000221996 TRMT2AQ8IZ69 625 aaKnown RBP11.99□□□□□ -0.49
CRX-201ENST00000221996 TSPYL6Q8N831 410 aa11.99□□□□□ -0.49
CRX-201ENST00000221996 HDAC1Q13547 482 aaPredicted RBP11.98□□□□□ -0.49
CRX-201ENST00000221996 C8orf58Q8NAV2 365 aa11.98□□□□□ -0.49
CRX-201ENST00000221996 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
CRX-201ENST00000221996 F6X3S4 739 aa11.98□□□□□ -0.49
CRX-201ENST00000221996 NEXNQ0ZGT2 675 aa11.98□□□□□ -0.49
CRX-201ENST00000221996 ZNF530Q6P9A1 599 aaPredicted RBP11.98□□□□□ -0.49
CRX-201ENST00000221996 PROSER2Q86WR7 435 aaPredicted RBP11.98□□□□□ -0.49
CRX-201ENST00000221996 SHROOM2Q13796 1616 aa11.98□□□□□ -0.49
CRX-201ENST00000221996 GNAT3A8MTJ3 354 aa11.98□□□□□ -0.49
CRX-201ENST00000221996 PLEKHO1Q53GL0 409 aaPredicted RBP11.98□□□□□ -0.49
CRX-201ENST00000221996 USHBP1Q8N6Y0 703 aa11.98□□□□□ -0.49
CRX-201ENST00000221996 TBC1D2Q9BYX2 928 aa11.98□□□□□ -0.49
CRX-201ENST00000221996 DIAPH3Q9NSV4 1193 aa11.98□□□□□ -0.49
CRX-201ENST00000221996 GOLGA6L4A6NEF3 574 aa11.97□□□□□ -0.49
CRX-201ENST00000221996 EIF4A2Q14240 407 aaKnown RBP11.97□□□□□ -0.49
CRX-201ENST00000221996 TTC5Q8N0Z6 440 aa11.97□□□□□ -0.49
CRX-201ENST00000221996 EFCAB6Q5THR3 1501 aa11.97□□□□□ -0.49
CRX-201ENST00000221996 SEC24BO95487 1268 aa11.97□□□□□ -0.49
CRX-201ENST00000221996 DDX58O95786 925 aaKnown RBP11.97□□□□□ -0.49
CRX-201ENST00000221996 CCDC9Q9Y3X0 531 aaKnown RBP11.97□□□□□ -0.49
CRX-201ENST00000221996 VAMP4O75379 141 aa11.96□□□□□ -0.49
CRX-201ENST00000221996 IFIT2P09913 472 aaKnown RBP11.96□□□□□ -0.49
CRX-201ENST00000221996 SKOR2Q2VWA4 1001 aaPredicted RBP11.96□□□□□ -0.49
CRX-201ENST00000221996 TBC1D32Q96NH3 1257 aa11.96□□□□□ -0.49
CRX-201ENST00000221996 KIF1BO60333 1816 aa11.96□□□□□ -0.49
CRX-201ENST00000221996 SMARCA5O60264 1052 aaPredicted RBP11.96□□□□□ -0.49
CRX-201ENST00000221996 ATF3P18847 181 aa11.96□□□□□ -0.49
CRX-201ENST00000221996 EXOC6BQ9Y2D4 811 aa11.96□□□□□ -0.49
CRX-201ENST00000221996 ZFYVE9O95405 1425 aa11.96□□□□□ -0.5
CRX-201ENST00000221996 TRAK2O60296 914 aa11.96□□□□□ -0.5
CRX-201ENST00000221996 MRPL50Q8N5N7 158 aaKnown RBP11.96□□□□□ -0.5
CRX-201ENST00000221996 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.5
CRX-201ENST00000221996 ARHGAP45Q92619 1136 aa11.95□□□□□ -0.5
CRX-201ENST00000221996 E9PCH4 1651 aa11.95□□□□□ -0.5
CRX-201ENST00000221996 RABEP1Q15276 862 aa11.95□□□□□ -0.5
CRX-201ENST00000221996 LRRCC1Q9C099 1032 aa11.95□□□□□ -0.5
CRX-201ENST00000221996 CLASP1Q7Z460 1538 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 HSP90AB4PQ58FF6 505 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 SRCIN1Q9C0H9 1055 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 ZBTB40Q9NUA8 1239 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 PHF8Q9UPP1 1060 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 KRT24Q2M2I5 525 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 SPHKAPQ2M3C7 1700 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 MADDQ8WXG6 1647 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 CFAP74Q9C0B2 1584 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 NEK4P51957 841 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 NUCB2P80303 420 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 NUCB1Q02818 461 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 G3BP1Q13283 466 aaKnown RBP eCLIP11.94□□□□□ -0.5
CRX-201ENST00000221996 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 MAP3K4Q9Y6R4 1608 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 MSNP26038 577 aaKnown RBP11.94□□□□□ -0.5
CRX-201ENST00000221996 DNTTIP2Q5QJE6 756 aaKnown RBP11.94□□□□□ -0.5
CRX-201ENST00000221996 GORABQ5T7V8 394 aa11.94□□□□□ -0.5
CRX-201ENST00000221996 K7ELQ4 463 aaPredicted RBP11.93□□□□□ -0.5
CRX-201ENST00000221996 IL13P35225 146 aa11.93□□□□□ -0.5
CRX-201ENST00000221996 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
CRX-201ENST00000221996 RUFY2Q8WXA3 655 aa11.93□□□□□ -0.5
CRX-201ENST00000221996 HECW2Q9P2P5 1572 aa11.93□□□□□ -0.5
CRX-201ENST00000221996 IL27Q8NEV9 243 aa11.93□□□□□ -0.5
CRX-201ENST00000221996 IL1RAPL2Q9NP60 686 aa11.93□□□□□ -0.5
CRX-201ENST00000221996 MCM4P33991 863 aa11.92□□□□□ -0.5
CRX-201ENST00000221996 TAF7Q15545 349 aaPredicted RBP11.92□□□□□ -0.5
CRX-201ENST00000221996 BMP2KLQ5H9B9 411 aa11.92□□□□□ -0.5
CRX-201ENST00000221996 SYAP1Q96A49 352 aaPredicted RBP11.92□□□□□ -0.5
CRX-201ENST00000221996 ABCC3O15438 1527 aa11.92□□□□□ -0.5
CRX-201ENST00000221996 ERC2O15083 957 aa11.92□□□□□ -0.5
CRX-201ENST00000221996 TAF7LQ5H9L4 462 aa11.92□□□□□ -0.5
CRX-201ENST00000221996 CLASRPQ8N2M8 674 aaKnown RBP11.92□□□□□ -0.5
CRX-201ENST00000221996 FOXO3O43524 673 aa11.92□□□□□ -0.5
CRX-201ENST00000221996 ZRSR1Q15695 479 aaKnown RBP11.92□□□□□ -0.5
CRX-201ENST00000221996 SMC5Q8IY18 1101 aa11.92□□□□□ -0.5
CRX-201ENST00000221996 RNF17Q9BXT8 1623 aaKnown RBP11.91□□□□□ -0.5
CRX-201ENST00000221996 ZC3H6P61129 1189 aaKnown RBP11.91□□□□□ -0.5
CRX-201ENST00000221996 DNAJC5Q9H3Z4 198 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms