RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 SPINK5Q9NQ38 1064 aaPredicted RBP19.9■□□□□ 0.78
PAF1-201ENST00000221265 PRKAR2BP31323 418 aa19.89■□□□□ 0.77
PAF1-201ENST00000221265 FCHSD2O94868 740 aa19.88■□□□□ 0.77
PAF1-201ENST00000221265 WWC1Q8IX03 1113 aa19.88■□□□□ 0.77
PAF1-201ENST00000221265 RGPD1P0DJD0 1748 aa19.88■□□□□ 0.77
PAF1-201ENST00000221265 PXDNQ92626 1479 aa19.88■□□□□ 0.77
PAF1-201ENST00000221265 NPHP3Q7Z494 1330 aa19.88■□□□□ 0.77
PAF1-201ENST00000221265 GOLGA2Q08379 1002 aa19.87■□□□□ 0.77
PAF1-201ENST00000221265 HOXC9P31274 260 aa19.87■□□□□ 0.77
PAF1-201ENST00000221265 AEBP1Q8IUX7 1158 aa19.87■□□□□ 0.77
PAF1-201ENST00000221265 PHACTR3Q96KR7 559 aa19.87■□□□□ 0.77
PAF1-201ENST00000221265 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
PAF1-201ENST00000221265 MAPK8IP3Q9UPT6 1336 aa19.86■□□□□ 0.77
PAF1-201ENST00000221265 SLIT3O75094 1523 aa19.86■□□□□ 0.77
PAF1-201ENST00000221265 LTBP4Q8N2S1 1624 aa19.86■□□□□ 0.77
PAF1-201ENST00000221265 TMPOP42166 694 aaKnown RBP19.85■□□□□ 0.77
PAF1-201ENST00000221265 MED1Q15648 1581 aaPredicted RBP19.85■□□□□ 0.77
PAF1-201ENST00000221265 USP19O94966 1318 aa19.85■□□□□ 0.77
PAF1-201ENST00000221265 GCP02774 474 aa19.85■□□□□ 0.77
PAF1-201ENST00000221265 NGEFQ8N5V2 710 aa19.85■□□□□ 0.77
PAF1-201ENST00000221265 ZBTB7CA1YPR0 619 aa19.84■□□□□ 0.77
PAF1-201ENST00000221265 SLFN5Q08AF3 891 aa19.84■□□□□ 0.77
PAF1-201ENST00000221265 DUSP27Q5VZP5 1158 aa19.84■□□□□ 0.77
PAF1-201ENST00000221265 SULT6B1Q6IMI4 303 aa19.83■□□□□ 0.76
PAF1-201ENST00000221265 KCNH5Q8NCM2 988 aa19.83■□□□□ 0.76
PAF1-201ENST00000221265 DLG5Q8TDM6 1919 aa19.82■□□□□ 0.76
PAF1-201ENST00000221265 TNS3Q68CZ2 1445 aa19.82■□□□□ 0.76
PAF1-201ENST00000221265 KIF24Q5T7B8 1368 aa19.82■□□□□ 0.76
PAF1-201ENST00000221265 LTV1Q96GA3 475 aaPredicted RBP19.82■□□□□ 0.76
PAF1-201ENST00000221265 PNNQ9H307 717 aaKnown RBP19.82■□□□□ 0.76
PAF1-201ENST00000221265 TRIM35Q9UPQ4 493 aa19.82■□□□□ 0.76
PAF1-201ENST00000221265 CCDC27Q2M243 656 aa19.81■□□□□ 0.76
PAF1-201ENST00000221265 TRMT2AQ8IZ69 625 aaKnown RBP19.81■□□□□ 0.76
PAF1-201ENST00000221265 SPATA31A3Q5VYP0 1347 aa19.81■□□□□ 0.76
PAF1-201ENST00000221265 PHRF1Q9P1Y6 1649 aaKnown RBP19.81■□□□□ 0.76
PAF1-201ENST00000221265 CABLES1Q8TDN4 633 aa19.8■□□□□ 0.76
PAF1-201ENST00000221265 RIPK4P57078 832 aa19.8■□□□□ 0.76
PAF1-201ENST00000221265 IP6K1Q92551 441 aa19.8■□□□□ 0.76
PAF1-201ENST00000221265 EYA1Q99502 592 aa19.8■□□□□ 0.76
PAF1-201ENST00000221265 RGPD2P0DJD1 1756 aa19.8■□□□□ 0.76
PAF1-201ENST00000221265 RGPD5Q99666 1765 aa19.8■□□□□ 0.76
PAF1-201ENST00000221265 RTL1A6NKG5 1358 aa19.79■□□□□ 0.76
PAF1-201ENST00000221265 CRYBG1Q9Y4K1 1723 aa19.79■□□□□ 0.76
PAF1-201ENST00000221265 ARHGEF25Q86VW2 580 aa19.79■□□□□ 0.76
PAF1-201ENST00000221265 RCAN3Q9UKA8 241 aa19.78■□□□□ 0.76
PAF1-201ENST00000221265 SOS2Q07890 1332 aaPredicted RBP19.78■□□□□ 0.76
PAF1-201ENST00000221265 ARHGEF10O15013 1369 aa19.78■□□□□ 0.76
PAF1-201ENST00000221265 NHSL1Q5SYE7 1610 aa19.78■□□□□ 0.76
PAF1-201ENST00000221265 E9PSI1 815 aa19.77■□□□□ 0.76
PAF1-201ENST00000221265 ZC3H6P61129 1189 aaKnown RBP19.77■□□□□ 0.76
PAF1-201ENST00000221265 MYT1Q01538 1121 aa19.77■□□□□ 0.76
PAF1-201ENST00000221265 IGSF1Q8N6C5 1336 aa19.77■□□□□ 0.76
PAF1-201ENST00000221265 NFE2L2Q16236 605 aa19.77■□□□□ 0.75
PAF1-201ENST00000221265 NCBP3Q53F19 620 aaKnown RBP19.77■□□□□ 0.75
PAF1-201ENST00000221265 WDR63Q8IWG1 891 aa19.77■□□□□ 0.75
PAF1-201ENST00000221265 NEFMP07197 916 aa19.76■□□□□ 0.75
PAF1-201ENST00000221265 AXIN2Q9Y2T1 843 aa19.75■□□□□ 0.75
PAF1-201ENST00000221265 KDRP35968 1356 aa19.75■□□□□ 0.75
PAF1-201ENST00000221265 USHBP1Q8N6Y0 703 aa19.74■□□□□ 0.75
PAF1-201ENST00000221265 ROBO1Q9Y6N7 1651 aa19.74■□□□□ 0.75
PAF1-201ENST00000221265 RRP1P56182 461 aaKnown RBP19.74■□□□□ 0.75
PAF1-201ENST00000221265 CCDC136Q96JN2 1154 aa19.72■□□□□ 0.75
PAF1-201ENST00000221265 THUMPD2Q9BTF0 503 aaKnown RBP19.72■□□□□ 0.75
PAF1-201ENST00000221265 LRRC59Q96AG4 307 aaKnown RBP19.72■□□□□ 0.75
PAF1-201ENST00000221265 NBPF6Q5VWK0 638 aa19.71■□□□□ 0.75
PAF1-201ENST00000221265 NBPF4Q96M43 638 aa19.71■□□□□ 0.75
PAF1-201ENST00000221265 COL18A1P39060 1754 aa19.71■□□□□ 0.75
PAF1-201ENST00000221265 FAM83GA6ND36 823 aa19.71■□□□□ 0.75
PAF1-201ENST00000221265 TSR2Q969E8 191 aaKnown RBP19.7■□□□□ 0.74
PAF1-201ENST00000221265 FANCIQ9NVI1 1328 aa19.69■□□□□ 0.74
PAF1-201ENST00000221265 ABCA3Q99758 1704 aa19.69■□□□□ 0.74
PAF1-201ENST00000221265 CHRNA2Q15822 529 aa19.69■□□□□ 0.74
PAF1-201ENST00000221265 ANP32EQ9BTT0 268 aa19.69■□□□□ 0.74
PAF1-201ENST00000221265 DCTN1Q14203 1278 aa19.68■□□□□ 0.74
PAF1-201ENST00000221265 ANKRD24Q8TF21 1146 aa19.68■□□□□ 0.74
PAF1-201ENST00000221265 KIAA0232Q92628 1395 aa19.67■□□□□ 0.74
PAF1-201ENST00000221265 MTHFSDQ2M296 383 aaKnown RBP19.67■□□□□ 0.74
PAF1-201ENST00000221265 PLIN1O60240 522 aa19.66■□□□□ 0.74
PAF1-201ENST00000221265 MYH16Q9H6N6 1097 aa19.66■□□□□ 0.74
PAF1-201ENST00000221265 IL16Q14005 1332 aa19.65■□□□□ 0.74
PAF1-201ENST00000221265 MSH5O43196 834 aa19.64■□□□□ 0.74
PAF1-201ENST00000221265 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.74
PAF1-201ENST00000221265 EXOC6Q8TAG9 804 aa19.64■□□□□ 0.74
PAF1-201ENST00000221265 ERBB3P21860 1342 aa19.64■□□□□ 0.73
PAF1-201ENST00000221265 MCM10Q7L590 875 aa19.63■□□□□ 0.73
PAF1-201ENST00000221265 LAS1LQ9Y4W2 734 aaKnown RBP19.63■□□□□ 0.73
PAF1-201ENST00000221265 CAMTA1Q9Y6Y1 1673 aa19.63■□□□□ 0.73
PAF1-201ENST00000221265 CPDO75976 1380 aa19.63■□□□□ 0.73
PAF1-201ENST00000221265 AHDC1Q5TGY3 1603 aaPredicted RBP19.62■□□□□ 0.73
PAF1-201ENST00000221265 BCAR3O75815 825 aa19.61■□□□□ 0.73
PAF1-201ENST00000221265 LMOD3Q0VAK6 560 aa19.61■□□□□ 0.73
PAF1-201ENST00000221265 NCAPD2Q15021 1401 aa19.61■□□□□ 0.73
PAF1-201ENST00000221265 EXOSC9Q06265 439 aaKnown RBP19.61■□□□□ 0.73
PAF1-201ENST00000221265 LMO7Q8WWI1 1683 aa19.6■□□□□ 0.73
PAF1-201ENST00000221265 HAP1P54257 671 aaPredicted RBP19.6■□□□□ 0.73
PAF1-201ENST00000221265 PIP4K2BP78356 416 aa19.59■□□□□ 0.73
PAF1-201ENST00000221265 PRDM11Q9NQV5 511 aa19.59■□□□□ 0.73
PAF1-201ENST00000221265 ZNF853P0CG23 659 aa19.58■□□□□ 0.73
PAF1-201ENST00000221265 GAS2L2Q8NHY3 880 aa19.58■□□□□ 0.73
PAF1-201ENST00000221265 ABCC6O95255 1503 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms