RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 ABCC6O95255 1503 aa32.25■■■□□ 2.75
HOMER3-201ENST00000221222 GLI3P10071 1580 aa32.24■■■□□ 2.75
HOMER3-201ENST00000221222 AATKQ6ZMQ8 1374 aa32.24■■■□□ 2.75
HOMER3-201ENST00000221222 CHRNA2Q15822 529 aa32.21■■■□□ 2.75
HOMER3-201ENST00000221222 MORC1Q86VD1 984 aa32.21■■■□□ 2.75
HOMER3-201ENST00000221222 NRAPQ86VF7 1730 aa32.21■■■□□ 2.75
HOMER3-201ENST00000221222 CC2D1BQ5T0F9 858 aaKnown RBP32.2■■■□□ 2.75
HOMER3-201ENST00000221222 MAP2P11137 1827 aaKnown RBP32.2■■■□□ 2.74
HOMER3-201ENST00000221222 FBLN1P23142 703 aa32.19■■■□□ 2.74
HOMER3-201ENST00000221222 CAMTA1Q9Y6Y1 1673 aa32.18■■■□□ 2.74
HOMER3-201ENST00000221222 CCDC9Q9Y3X0 531 aaKnown RBP32.18■■■□□ 2.74
HOMER3-201ENST00000221222 MAP3K19Q56UN5 1328 aa32.18■■■□□ 2.74
HOMER3-201ENST00000221222 RGPD5Q99666 1765 aa32.16■■■□□ 2.74
HOMER3-201ENST00000221222 ZBTB7CA1YPR0 619 aa32.16■■■□□ 2.74
HOMER3-201ENST00000221222 BTG4Q9NY30 223 aa32.16■■■□□ 2.74
HOMER3-201ENST00000221222 KIF24Q5T7B8 1368 aa32.15■■■□□ 2.74
HOMER3-201ENST00000221222 RRS1Q15050 365 aaKnown RBP32.15■■■□□ 2.74
HOMER3-201ENST00000221222 RTL1A6NKG5 1358 aa32.14■■■□□ 2.74
HOMER3-201ENST00000221222 PEAK1Q9H792 1746 aa32.14■■■□□ 2.74
HOMER3-201ENST00000221222 BRWD3Q6RI45 1802 aa32.13■■■□□ 2.73
HOMER3-201ENST00000221222 TNNT2P45379 298 aaPredicted RBP32.13■■■□□ 2.73
HOMER3-201ENST00000221222 VPS72Q15906 364 aa32.13■■■□□ 2.73
HOMER3-201ENST00000221222 AXIN2Q9Y2T1 843 aa32.12■■■□□ 2.73
HOMER3-201ENST00000221222 EP400Q96L91 3159 aa32.11■■■□□ 2.73
HOMER3-201ENST00000221222 IP6K1Q92551 441 aa32.11■■■□□ 2.73
HOMER3-201ENST00000221222 COL5A2P05997 1499 aaPredicted RBP32.11■■■□□ 2.73
HOMER3-201ENST00000221222 BLMP54132 1417 aaPredicted RBP32.11■■■□□ 2.73
HOMER3-201ENST00000221222 SMG6Q86US8 1419 aaKnown RBP32.11■■■□□ 2.73
HOMER3-201ENST00000221222 POLKQ9UBT6 870 aa32.1■■■□□ 2.73
HOMER3-201ENST00000221222 HOXC9P31274 260 aa32.08■■■□□ 2.73
HOMER3-201ENST00000221222 AMPHP49418 695 aa32.08■■■□□ 2.73
HOMER3-201ENST00000221222 CNGB1Q14028 1251 aaPredicted RBP32.08■■■□□ 2.73
HOMER3-201ENST00000221222 SEPT12Q8IYM1 358 aa32.08■■■□□ 2.73
HOMER3-201ENST00000221222 EMILIN1Q9Y6C2 1016 aa32.08■■■□□ 2.73
HOMER3-201ENST00000221222 FLT4P35916 1363 aa32.08■■■□□ 2.73
HOMER3-201ENST00000221222 PARD3Q8TEW0 1356 aa32.06■■■□□ 2.72
HOMER3-201ENST00000221222 A0A0G2JS52 829 aa32.04■■■□□ 2.72
HOMER3-201ENST00000221222 MYT1Q01538 1121 aa32.04■■■□□ 2.72
HOMER3-201ENST00000221222 INSRP06213 1382 aa32.03■■■□□ 2.72
HOMER3-201ENST00000221222 EVA1CP58658 441 aa32.02■■■□□ 2.72
HOMER3-201ENST00000221222 STRN4Q9NRL3 753 aa32.02■■■□□ 2.72
HOMER3-201ENST00000221222 FAM208AQ9UK61 1670 aaKnown RBP32.02■■■□□ 2.72
HOMER3-201ENST00000221222 ERBB3P21860 1342 aa32.02■■■□□ 2.72
HOMER3-201ENST00000221222 WDR17Q8IZU2 1322 aa32.01■■■□□ 2.71
HOMER3-201ENST00000221222 PPM1GO15355 546 aaPredicted RBP31.99■■■□□ 2.71
HOMER3-201ENST00000221222 HSP90AB2PQ58FF8 381 aa31.99■■■□□ 2.71
HOMER3-201ENST00000221222 RALBP1Q15311 655 aa31.98■■■□□ 2.71
HOMER3-201ENST00000221222 FAM98CQ17RN3 349 aaKnown RBP31.98■■■□□ 2.71
HOMER3-201ENST00000221222 CCDC125Q86Z20 511 aa31.98■■■□□ 2.71
HOMER3-201ENST00000221222 ANKRD24Q8TF21 1146 aa31.98■■■□□ 2.71
HOMER3-201ENST00000221222 CRB1P82279 1406 aa31.98■■■□□ 2.71
HOMER3-201ENST00000221222 LARP1Q6PKG0 1096 aaKnown RBP31.97■■■□□ 2.71
HOMER3-201ENST00000221222 PPP2R1AP30153 589 aa31.96■■■□□ 2.71
HOMER3-201ENST00000221222 SPATA31A5Q5VU36 1347 aa31.96■■■□□ 2.71
HOMER3-201ENST00000221222 SPATA31A7Q8IWB4 1347 aa31.96■■■□□ 2.71
HOMER3-201ENST00000221222 ONECUT3O60422 494 aaPredicted RBP31.95■■■□□ 2.71
HOMER3-201ENST00000221222 MTHFSP49914 203 aa31.95■■■□□ 2.71
HOMER3-201ENST00000221222 KRT27Q7Z3Y8 459 aa31.95■■■□□ 2.71
HOMER3-201ENST00000221222 CSB-PGBD3P0DP91 1061 aa31.94■■■□□ 2.7
HOMER3-201ENST00000221222 PRKRIP1Q9H875 184 aaPredicted RBP31.93■■■□□ 2.7
HOMER3-201ENST00000221222 SPATA31A1Q5TZJ5 1347 aa31.93■■■□□ 2.7
HOMER3-201ENST00000221222 RGPD2P0DJD1 1756 aa31.92■■■□□ 2.7
HOMER3-201ENST00000221222 TOM1L2Q6ZVM7 507 aa31.91■■■□□ 2.7
HOMER3-201ENST00000221222 DEFB132Q7Z7B7 95 aa31.91■■■□□ 2.7
HOMER3-201ENST00000221222 LTV1Q96GA3 475 aaPredicted RBP31.91■■■□□ 2.7
HOMER3-201ENST00000221222 CARD10Q9BWT7 1032 aa31.9■■■□□ 2.7
HOMER3-201ENST00000221222 SF3B2Q13435 895 aaKnown RBP31.88■■■□□ 2.69
HOMER3-201ENST00000221222 COL3A1P02461 1466 aaPredicted RBP31.87■■■□□ 2.69
HOMER3-201ENST00000221222 WNK3Q9BYP7 1800 aa31.87■■■□□ 2.69
HOMER3-201ENST00000221222 MYBBP1AQ9BQG0 1328 aaKnown RBP31.86■■■□□ 2.69
HOMER3-201ENST00000221222 EIF4A2Q14240 407 aaKnown RBP31.86■■■□□ 2.69
HOMER3-201ENST00000221222 NLRP2Q9NX02 1062 aa31.86■■■□□ 2.69
HOMER3-201ENST00000221222 THRAP3Q9Y2W1 955 aaKnown RBP31.86■■■□□ 2.69
HOMER3-201ENST00000221222 TCP11L2Q8N4U5 519 aa31.85■■■□□ 2.69
HOMER3-201ENST00000221222 FAM182BQ5T319 152 aa31.84■■■□□ 2.69
HOMER3-201ENST00000221222 BARGINQ6ZT62 677 aa31.83■■■□□ 2.69
HOMER3-201ENST00000221222 USP35Q9P2H5 1018 aa31.83■■■□□ 2.69
HOMER3-201ENST00000221222 NBPF6Q5VWK0 638 aa31.82■■■□□ 2.69
HOMER3-201ENST00000221222 NBPF4Q96M43 638 aa31.82■■■□□ 2.69
HOMER3-201ENST00000221222 THSD7AQ9UPZ6 1657 aa31.82■■■□□ 2.68
HOMER3-201ENST00000221222 NCAPD2Q15021 1401 aa31.82■■■□□ 2.68
HOMER3-201ENST00000221222 RGPD1P0DJD0 1748 aa31.82■■■□□ 2.68
HOMER3-201ENST00000221222 IL13P35225 146 aa31.81■■■□□ 2.68
HOMER3-201ENST00000221222 CFAP53Q96M91 514 aa31.81■■■□□ 2.68
HOMER3-201ENST00000221222 ANP32CO43423 234 aa31.8■■■□□ 2.68
HOMER3-201ENST00000221222 DIAPH1O60610 1272 aaKnown RBP31.78■■■□□ 2.68
HOMER3-201ENST00000221222 EYA1Q99502 592 aa31.78■■■□□ 2.68
HOMER3-201ENST00000221222 DISP2A7MBM2 1401 aa31.78■■■□□ 2.68
HOMER3-201ENST00000221222 PARP4Q9UKK3 1724 aaKnown RBP31.77■■■□□ 2.68
HOMER3-201ENST00000221222 IGSF1Q8N6C5 1336 aa31.76■■■□□ 2.67
HOMER3-201ENST00000221222 CDCA7Q9BWT1 371 aaPredicted RBP31.74■■■□□ 2.67
HOMER3-201ENST00000221222 USHBP1Q8N6Y0 703 aa31.73■■■□□ 2.67
HOMER3-201ENST00000221222 SRCAPQ6ZRS2 3230 aa31.73■■■□□ 2.67
HOMER3-201ENST00000221222 LRRC37A3O60309 1634 aa31.71■■■□□ 2.67
HOMER3-201ENST00000221222 IL2RBP14784 551 aa31.7■■■□□ 2.67
HOMER3-201ENST00000221222 BAG6P46379 1132 aa31.7■■■□□ 2.67
HOMER3-201ENST00000221222 KDRP35968 1356 aa31.68■■■□□ 2.66
HOMER3-201ENST00000221222 MEGF6O75095 1541 aa31.68■■■□□ 2.66
HOMER3-201ENST00000221222 DIEXFQ68CQ4 756 aaKnown RBP31.66■■■□□ 2.66
HOMER3-201ENST00000221222 NUDCQ9Y266 331 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms