RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ADAMTS8Q9UP79 889 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 CYP46A1Q9Y6A2 500 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 IL16Q14005 1332 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 SMTNL1A8MU46 457 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 TUBB4AP04350 444 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 RRP12Q5JTH9 1297 aaKnown RBP5.24□□□□□ -1.57
CHD9-201ENST00000219084 WASF1Q92558 559 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 ZMYM3Q14202 1370 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 GRIN2AQ12879 1464 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 ADAMTS12P58397 1594 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 CTAGE5O15320 804 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 FCHSD2O94868 740 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 EPS15P42566 896 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 LRRCC1Q9C099 1032 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 GBP3Q9H0R5 595 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 PPP6R1Q9UPN7 881 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 NFXL1Q6ZNB6 911 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 NOL8Q76FK4 1167 aaKnown RBP5.24□□□□□ -1.57
CHD9-201ENST00000219084 ZSCAN30Q86W11 494 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 ZNHIT6Q9NWK9 470 aaKnown RBP5.24□□□□□ -1.57
CHD9-201ENST00000219084 SOX12O15370 315 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 SH2B1Q9NRF2 756 aaPredicted RBP5.24□□□□□ -1.57
CHD9-201ENST00000219084 CHD1LQ86WJ1 897 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 MAGEC2Q9UBF1 373 aaPredicted RBP5.24□□□□□ -1.57
CHD9-201ENST00000219084 TBC1D2BQ9UPU7 963 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 POGZQ7Z3K3 1410 aa5.24□□□□□ -1.57
CHD9-201ENST00000219084 POTEB2H3BUK9 544 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 SDF4Q9BRK5 362 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 TCP11L2Q8N4U5 519 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 PCMTD1Q96MG8 357 aaPredicted RBP5.23□□□□□ -1.57
CHD9-201ENST00000219084 WDR62O43379 1518 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 FRAT2O75474 233 aaPredicted RBP5.23□□□□□ -1.57
CHD9-201ENST00000219084 DDX11Q96FC9 970 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 TRIM34Q9BYJ4 488 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 TOMM22Q9NS69 142 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 G3V3G9 751 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 MAP9Q49MG5 647 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 DCAF8Q5TAQ9 597 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 RPAP2Q8IXW5 612 aaPredicted RBP5.23□□□□□ -1.57
CHD9-201ENST00000219084 PANK1Q8TE04 598 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 LNPKQ9C0E8 428 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 SAMD9Q5K651 1589 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 CCDC112Q8NEF3 446 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 GOLGA6L9A6NEM1 432 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 CTNNA3Q9UI47 895 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 TAOK2Q9UL54 1235 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 CEP131Q9UPN4 1083 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 PTPRCP08575 1304 aa5.23□□□□□ -1.57
CHD9-201ENST00000219084 HS1BP3Q53T59 392 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 TNMDQ9H2S6 317 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 ESPNB1AK53 854 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 TULP1O00294 542 aaPredicted RBP5.22□□□□□ -1.57
CHD9-201ENST00000219084 VPS37DQ86XT2 251 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 CEP57L1Q8IYX8 460 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 BCL2L13Q9BXK5 485 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 PDZRN3Q9UPQ7 1066 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 ZMYM4Q5VZL5 1548 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 MCM4P33991 863 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 PKNOX2Q96KN3 472 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 PYM1Q9BRP8 204 aaKnown RBP5.22□□□□□ -1.57
CHD9-201ENST00000219084 ABCC5O15440 1437 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 ANKRD18AQ8IVF6 992 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 MINK1Q8N4C8 1332 aaPredicted RBP5.22□□□□□ -1.57
CHD9-201ENST00000219084 SLFN5Q08AF3 891 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 CCDC183Q5T5S1 534 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 CREBRFQ8IUR6 639 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 TRIM22Q8IYM9 498 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 SCAND2PQ9GZW5 306 aaPredicted RBP5.22□□□□□ -1.57
CHD9-201ENST00000219084 GNL3LQ9NVN8 582 aaKnown RBP5.22□□□□□ -1.57
CHD9-201ENST00000219084 KIAA0754O94854 1291 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 MTHFSP49914 203 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 PLEKHO1Q53GL0 409 aaPredicted RBP5.22□□□□□ -1.57
CHD9-201ENST00000219084 PHAXQ9H814 394 aaKnown RBP5.22□□□□□ -1.57
CHD9-201ENST00000219084 NSD3Q9BZ95 1437 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 ZSCAN12O43309 604 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 MLECQ14165 292 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 UVSSAQ2YD98 709 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 TWISTNBQ3B726 338 aaPredicted RBP5.22□□□□□ -1.57
CHD9-201ENST00000219084 INCENPQ9NQS7 918 aa5.22□□□□□ -1.57
CHD9-201ENST00000219084 CGNQ9P2M7 1197 aaKnown RBP5.22□□□□□ -1.57
CHD9-201ENST00000219084 R3HCC1Q9Y3T6 440 aaKnown RBP5.22□□□□□ -1.57
CHD9-201ENST00000219084 NEK4P51957 841 aa5.21□□□□□ -1.57
CHD9-201ENST00000219084 GSDMDP57764 484 aa5.21□□□□□ -1.57
CHD9-201ENST00000219084 APPP05067 770 aa5.21□□□□□ -1.58
CHD9-201ENST00000219084 GTF2E1P29083 439 aaPredicted RBP5.21□□□□□ -1.58
CHD9-201ENST00000219084 FOXD4L5Q5VV16 416 aaPredicted RBP5.21□□□□□ -1.58
CHD9-201ENST00000219084 PPFIBP1Q86W92 1011 aa5.21□□□□□ -1.58
CHD9-201ENST00000219084 FOXD4L4Q8WXT5 416 aaPredicted RBP5.21□□□□□ -1.58
CHD9-201ENST00000219084 H0YHG0 523 aa5.21□□□□□ -1.58
CHD9-201ENST00000219084 DYNC1I1O14576 645 aa5.21□□□□□ -1.58
CHD9-201ENST00000219084 POLR3GO15318 223 aaPredicted RBP5.21□□□□□ -1.58
CHD9-201ENST00000219084 PRIMPOLQ96LW4 560 aa5.21□□□□□ -1.58
CHD9-201ENST00000219084 FSD1Q9BTV5 496 aa5.21□□□□□ -1.58
CHD9-201ENST00000219084 ANKRD36BQ8N2N9 1353 aa5.21□□□□□ -1.58
CHD9-201ENST00000219084 ARHGEF11O15085 1522 aa5.21□□□□□ -1.58
CHD9-201ENST00000219084 PSME1Q06323 249 aa5.21□□□□□ -1.58
CHD9-201ENST00000219084 PDCL3Q9H2J4 239 aa5.21□□□□□ -1.58
CHD9-201ENST00000219084 NOB1Q9ULX3 412 aaKnown RBP5.21□□□□□ -1.58
CHD9-201ENST00000219084 ZFYVE9O95405 1425 aa5.21□□□□□ -1.58
CHD9-201ENST00000219084 NACAP1Q9BZK3 213 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms