RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 EMILIN1Q9Y6C2 1016 aa13.38□□□□□ -0.27
RGPD5-201ENST00000016946 ATF7IPQ6VMQ6 1270 aa13.38□□□□□ -0.27
RGPD5-201ENST00000016946 CEP126Q9P2H0 1117 aa13.38□□□□□ -0.27
RGPD5-201ENST00000016946 XBP1P17861 261 aa13.38□□□□□ -0.27
RGPD5-201ENST00000016946 TSR1Q2NL82 804 aaKnown RBP13.38□□□□□ -0.27
RGPD5-201ENST00000016946 GOLGA6L19H0YKK7 550 aa13.37□□□□□ -0.27
RGPD5-201ENST00000016946 EXOC5O00471 708 aa13.37□□□□□ -0.27
RGPD5-201ENST00000016946 TMPOP42166 694 aaKnown RBP13.37□□□□□ -0.27
RGPD5-201ENST00000016946 BRMS1Q9HCU9 246 aa13.37□□□□□ -0.27
RGPD5-201ENST00000016946 TOM1O60784 492 aa13.37□□□□□ -0.27
RGPD5-201ENST00000016946 BICD2Q8TD16 824 aa13.37□□□□□ -0.27
RGPD5-201ENST00000016946 C22orf23Q9BZE7 217 aa13.37□□□□□ -0.27
RGPD5-201ENST00000016946 BCAR3O75815 825 aa13.37□□□□□ -0.27
RGPD5-201ENST00000016946 SKOR2Q2VWA4 1001 aaPredicted RBP13.37□□□□□ -0.27
RGPD5-201ENST00000016946 USHBP1Q8N6Y0 703 aa13.37□□□□□ -0.27
RGPD5-201ENST00000016946 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
RGPD5-201ENST00000016946 ZNF652Q9Y2D9 606 aa13.36□□□□□ -0.27
RGPD5-201ENST00000016946 NACAP1Q9BZK3 213 aa13.36□□□□□ -0.27
RGPD5-201ENST00000016946 MCM10Q7L590 875 aa13.35□□□□□ -0.27
RGPD5-201ENST00000016946 HOOK1Q9UJC3 728 aaKnown RBP13.35□□□□□ -0.27
RGPD5-201ENST00000016946 SRGAP3O43295 1099 aa13.35□□□□□ -0.27
RGPD5-201ENST00000016946 LRRCC1Q9C099 1032 aa13.35□□□□□ -0.27
RGPD5-201ENST00000016946 TPM1P09493 284 aa13.35□□□□□ -0.27
RGPD5-201ENST00000016946 IGHMBP2P38935 993 aaKnown RBP13.35□□□□□ -0.27
RGPD5-201ENST00000016946 PDE4CQ08493 712 aa13.35□□□□□ -0.27
RGPD5-201ENST00000016946 MSH6P52701 1360 aa13.35□□□□□ -0.27
RGPD5-201ENST00000016946 UBAP1LF5GYI3 381 aa13.35□□□□□ -0.27
RGPD5-201ENST00000016946 DEKP35659 375 aaKnown RBP13.35□□□□□ -0.27
RGPD5-201ENST00000016946 ANO8Q9HCE9 1232 aaPredicted RBP13.35□□□□□ -0.27
RGPD5-201ENST00000016946 ZPR1O75312 459 aa13.35□□□□□ -0.27
RGPD5-201ENST00000016946 MPRIPQ6WCQ1 1025 aa13.35□□□□□ -0.27
RGPD5-201ENST00000016946 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
RGPD5-201ENST00000016946 ANKRD20A12PQ8NF67 263 aa13.34□□□□□ -0.27
RGPD5-201ENST00000016946 TAF7Q15545 349 aaPredicted RBP13.34□□□□□ -0.27
RGPD5-201ENST00000016946 RRP12Q5JTH9 1297 aaKnown RBP13.34□□□□□ -0.27
RGPD5-201ENST00000016946 PDZRN3Q9UPQ7 1066 aa13.34□□□□□ -0.27
RGPD5-201ENST00000016946 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
RGPD5-201ENST00000016946 ATP10BO94823 1461 aa13.33□□□□□ -0.27
RGPD5-201ENST00000016946 DUSP27Q5VZP5 1158 aa13.33□□□□□ -0.27
RGPD5-201ENST00000016946 ZSCAN25Q6NSZ9 544 aa13.33□□□□□ -0.28
RGPD5-201ENST00000016946 THUMPD2Q9BTF0 503 aaKnown RBP13.33□□□□□ -0.28
RGPD5-201ENST00000016946 UHRF1BP1LA0JNW5 1464 aa13.33□□□□□ -0.28
RGPD5-201ENST00000016946 FOSBP53539 338 aa13.33□□□□□ -0.28
RGPD5-201ENST00000016946 NUCB2P80303 420 aa13.33□□□□□ -0.28
RGPD5-201ENST00000016946 MIS18AQ9NYP9 233 aa13.33□□□□□ -0.28
RGPD5-201ENST00000016946 CHMP5Q9NZZ3 219 aa13.33□□□□□ -0.28
RGPD5-201ENST00000016946 KDM5BQ9UGL1 1544 aa13.33□□□□□ -0.28
RGPD5-201ENST00000016946 RBM5P52756 815 aaKnown RBP eCLIP13.33□□□□□ -0.28
RGPD5-201ENST00000016946 CCDC73Q6ZRK6 1079 aa13.32□□□□□ -0.28
RGPD5-201ENST00000016946 PTPN23Q9H3S7 1636 aa13.32□□□□□ -0.28
RGPD5-201ENST00000016946 ACEP12821 1306 aa13.32□□□□□ -0.28
RGPD5-201ENST00000016946 CCDC85AQ96PX6 553 aaPredicted RBP13.32□□□□□ -0.28
RGPD5-201ENST00000016946 FAM135AQ9P2D6 1515 aa13.32□□□□□ -0.28
RGPD5-201ENST00000016946 LARP1Q6PKG0 1096 aaKnown RBP13.32□□□□□ -0.28
RGPD5-201ENST00000016946 MVPQ14764 893 aaKnown RBP13.32□□□□□ -0.28
RGPD5-201ENST00000016946 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
RGPD5-201ENST00000016946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.31□□□□□ -0.28
RGPD5-201ENST00000016946 AACSQ86V21 672 aa13.31□□□□□ -0.28
RGPD5-201ENST00000016946 TTC21BQ7Z4L5 1316 aa13.31□□□□□ -0.28
RGPD5-201ENST00000016946 NPHP3Q7Z494 1330 aa13.31□□□□□ -0.28
RGPD5-201ENST00000016946 WDR7Q9Y4E6 1490 aa13.31□□□□□ -0.28
RGPD5-201ENST00000016946 IFNL2Q8IZJ0 200 aa13.31□□□□□ -0.28
RGPD5-201ENST00000016946 SCAF11Q99590 1463 aaKnown RBP13.3□□□□□ -0.28
RGPD5-201ENST00000016946 DCTN1Q14203 1278 aa13.3□□□□□ -0.28
RGPD5-201ENST00000016946 IFT57Q9NWB7 429 aa13.3□□□□□ -0.28
RGPD5-201ENST00000016946 FKBP4Q02790 459 aaKnown RBP eCLIP13.3□□□□□ -0.28
RGPD5-201ENST00000016946 PCMTD1Q96MG8 357 aaPredicted RBP13.3□□□□□ -0.28
RGPD5-201ENST00000016946 RAI14Q9P0K7 980 aa13.3□□□□□ -0.28
RGPD5-201ENST00000016946 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.3□□□□□ -0.28
RGPD5-201ENST00000016946 ATP2B2Q01814 1243 aa13.3□□□□□ -0.28
RGPD5-201ENST00000016946 A2MP01023 1474 aa13.3□□□□□ -0.28
RGPD5-201ENST00000016946 ZNF518AQ6AHZ1 1483 aa13.3□□□□□ -0.28
RGPD5-201ENST00000016946 FMNL2Q96PY5 1086 aa13.3□□□□□ -0.28
RGPD5-201ENST00000016946 CHRNA2Q15822 529 aa13.29□□□□□ -0.28
RGPD5-201ENST00000016946 HSP90AB3PQ58FF7 597 aa13.29□□□□□ -0.28
RGPD5-201ENST00000016946 PRM3Q9NNZ6 103 aa13.29□□□□□ -0.28
RGPD5-201ENST00000016946 IPO7O95373 1038 aaKnown RBP13.29□□□□□ -0.28
RGPD5-201ENST00000016946 ABCC11Q96J66 1382 aa13.29□□□□□ -0.28
RGPD5-201ENST00000016946 NEK4P51957 841 aa13.29□□□□□ -0.28
RGPD5-201ENST00000016946 ZSCAN29Q8IWY8 852 aaPredicted RBP13.28□□□□□ -0.28
RGPD5-201ENST00000016946 TMOD2Q9NZR1 351 aa13.28□□□□□ -0.28
RGPD5-201ENST00000016946 ANKRD24Q8TF21 1146 aa13.28□□□□□ -0.28
RGPD5-201ENST00000016946 TEX13AQ9BXU3 409 aaPredicted RBP13.28□□□□□ -0.28
RGPD5-201ENST00000016946 NSD2O96028 1365 aa13.28□□□□□ -0.28
RGPD5-201ENST00000016946 HSPA2P54652 639 aa13.27□□□□□ -0.28
RGPD5-201ENST00000016946 LRP2BPQ9P2M1 347 aa13.27□□□□□ -0.28
RGPD5-201ENST00000016946 R3HCC1Q9Y3T6 440 aaKnown RBP13.27□□□□□ -0.28
RGPD5-201ENST00000016946 ATP2B1P20020 1258 aa13.27□□□□□ -0.29
RGPD5-201ENST00000016946 IL1RAPL2Q9NP60 686 aa13.27□□□□□ -0.29
RGPD5-201ENST00000016946 SLFN5Q08AF3 891 aa13.27□□□□□ -0.29
RGPD5-201ENST00000016946 METTL24Q5JXM2 366 aa13.27□□□□□ -0.29
RGPD5-201ENST00000016946 TRMT112Q9UI30 125 aaKnown RBP13.26□□□□□ -0.29
RGPD5-201ENST00000016946 KDM4AO75164 1064 aa13.26□□□□□ -0.29
RGPD5-201ENST00000016946 PDCP20941 246 aa13.26□□□□□ -0.29
RGPD5-201ENST00000016946 MCM2P49736 904 aa13.26□□□□□ -0.29
RGPD5-201ENST00000016946 DBF4Q9UBU7 674 aaPredicted RBP13.26□□□□□ -0.29
RGPD5-201ENST00000016946 MYD88Q99836 296 aa13.26□□□□□ -0.29
RGPD5-201ENST00000016946 IFIT1P09914 478 aaKnown RBP13.26□□□□□ -0.29
RGPD5-201ENST00000016946 NUP153P49790 1475 aaKnown RBP13.26□□□□□ -0.29
RGPD5-201ENST00000016946 IDH1O75874 414 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms