RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	NSMCE1	Q8WV22	266 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	FAF2	Q96CS3	445 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	ANP32E	Q9BTT0	268 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	MMP20	O60882	483 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	TRIM16	O95361	564 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	LCA5L	O95447	670 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	ITGAV	P06756	1048 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	ITIH2	P19823	946 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	EPHA8	P29322	1005 aa	Predicted RBP	15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	HSPA9	P38646	679 aa	Known RBP	15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	FOXC1	Q12948	553 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	TMEM52B	Q4KMG9	183 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	ERAP2	Q6P179	960 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	KYAT3	Q6YP21	454 aa	Known RBP	15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	PTAR1	Q7Z6K3	402 aa	Predicted RBP	15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	GATAD2A	Q86YP4	633 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	DCP2	Q8IU60	420 aa	Known RBP	15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	DENND6B	Q8NEG7	585 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	SAP25	Q8TEE9	199 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	BMF	Q96LC9	184 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	PANX2	Q96RD6	677 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	KLF6	Q99612	283 aa	Predicted RBP	15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	WRAP53	Q9BUR4	548 aa	Known RBP	15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	PCDH12	Q9NPG4	1184 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	EPG5	Q9HCE0	2579 aa		15.17	■□□□□ 0.02
PHGDH-231	ENST00000641939	ASPM	Q8IZT6	3477 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	KNTC1	P50748	2209 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	POM121B	A6NF01	834 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	FPGT	O14772	594 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	TM7SF2	O76062	418 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	FTH1P19	P0C7X4	201 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	CR2	P20023	1033 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	CYLC1	P35663	651 aa	Predicted RBP	15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	GARS	P41250	739 aa	Known RBP	15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	SLC1A1	P43005	524 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	MMP13	P45452	471 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	GALNT2	Q10471	571 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	SPA17	Q15506	151 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	MARC1	Q5VT66	337 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939		Q6ZSR6	202 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	PQLC3	Q8N755	202 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	PAF1	Q8N7H5	531 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	RAPGEF5	Q92565	580 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	ECHDC3	Q96DC8	303 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	RNF157	Q96PX1	679 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	NUDCD1	Q96RS6	583 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	MGME1	Q9BQP7	344 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	C1QTNF7	Q9BXJ2	289 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	LUC7L	Q9NQ29	371 aa	Known RBP	15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	SCUBE2	Q9NQ36	999 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	WASF3	Q9UPY6	502 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	APOBEC2	Q9Y235	224 aa	Known RBP	15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	ATP8A1	Q9Y2Q0	1164 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	PCDHA13	Q9Y5I0	950 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	PTPRB	P23467	1997 aa		15.16	■□□□□ 0.02
PHGDH-231	ENST00000641939	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	TTC24	A2A3L6	582 aa	Predicted RBP	15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	LRRD1	A4D1F6	860 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	ZNF487	B1APH4	448 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	TRAFD1	O14545	582 aa	Predicted RBP	15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	RIOK3	O14730	519 aa	Known RBP	15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	MMP12	P39900	470 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	NOP2	P46087	812 aa	Known RBP	15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	RABIF	P47224	123 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	POLR2L	P62875	67 aa	Known RBP	15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	BNIP3	Q12983	259 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	IFI16	Q16666	785 aa	Known RBP	15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	RALGPS1	Q5JS13	557 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	LRRC38	Q5VT99	294 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	TIGD7	Q6NT04	549 aa	Predicted RBP	15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	ZSWIM9	Q86XI8	627 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	VSIG1	Q86XK7	387 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	RHOT1	Q8IXI2	618 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	SLC22A18AS	Q8N1D0	253 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	PGBD5	Q8N414	524 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	CENPT	Q96BT3	561 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	IFT43	Q96FT9	208 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	NSMCE3	Q96MG7	304 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	GPR27	Q9NS67	375 aa		15.15	■□□□□ 0.02
PHGDH-231	ENST00000641939	C3orf70	A6NLC5	250 aa	Predicted RBP	15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	TNFSF14	O43557	240 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	SPOP	O43791	374 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	SOCS5	O75159	536 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	MAP3K6	O95382	1288 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	KRT1	P04264	644 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	MX2	P20592	715 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	FECH	P22830	423 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	CCNC	P24863	283 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	HADHB	P55084	474 aa	Known RBP	15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	MAX	P61244	160 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	GBE1	Q04446	702 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	ODF2	Q5BJF6	829 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	KANSL1	Q7Z3B3	1105 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	TMTC1	Q8IUR5	882 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	TEX26	Q8N6G2	289 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	MAML1	Q92585	1016 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	FATE1	Q969F0	183 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	TSGA13	Q96PP4	275 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	NOD2	Q9HC29	1040 aa		15.14	■□□□□ 0.01
PHGDH-231	ENST00000641939	NT5M	Q9NPB1	228 aa		15.14	■□□□□ 0.01

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