RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 TMEM270Q6UE05 265 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 HERC6Q8IVU3 1022 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 SLC44A2Q8IWA5 706 aaPredicted RBP8.04□□□□□ -1.12
RTTN-223ENST00000640931 CCDC33Q8N5R6 958 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 ANKRD42Q8N9B4 389 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 KCT2Q8NC54 265 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 PHOSPHO2Q8TCD6 241 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 RFFLQ8WZ73 363 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 HDAC2Q92769 488 aaKnown RBP8.04□□□□□ -1.12
RTTN-223ENST00000640931 FBXL8Q96CD0 374 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 TWNKQ96RR1 684 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 ZNF347Q96SE7 839 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 LBHD1Q9BQE6 289 aaPredicted RBP8.04□□□□□ -1.12
RTTN-223ENST00000640931 C16orf70Q9BSU1 422 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 CINPQ9BW66 212 aaPredicted RBP8.04□□□□□ -1.12
RTTN-223ENST00000640931 OSBPL8Q9BZF1 889 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 WDR12Q9GZL7 423 aaKnown RBP8.04□□□□□ -1.12
RTTN-223ENST00000640931 LHX5Q9H2C1 402 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 KCNK13Q9HB14 408 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 KCNK9Q9NPC2 374 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 ARL8BQ9NVJ2 186 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 EHD3Q9NZN3 535 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 TMEM9Q9P0T7 183 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 GINS2Q9Y248 185 aa8.04□□□□□ -1.12
RTTN-223ENST00000640931 NOC2LQ9Y3T9 749 aaKnown RBP8.04□□□□□ -1.12
RTTN-223ENST00000640931 EVPLQ92817 2033 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 C12orf71A8MTZ7 269 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 BTNL10A8MVZ5 291 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 MEI4A8MW99 385 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 LINC01387J3KSC0 135 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 PGRMC1O00264 195 aaKnown RBP8.03□□□□□ -1.12
RTTN-223ENST00000640931 PLK4O00444 970 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 CLDN3O15551 220 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 CCNT2O60583 730 aaKnown RBP8.03□□□□□ -1.12
RTTN-223ENST00000640931 NDUFS2O75306 463 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 SNAP29O95721 258 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 PIGRP01833 764 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 CXCL8P10145 99 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 NPR3P17342 541 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 SYN1P17600 705 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 COMTP21964 271 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 PEX2P28328 305 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 SERPINB1P30740 379 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 FOXN2P32314 431 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 GTF2A2P52657 109 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 DRG2P55039 364 aaKnown RBP8.03□□□□□ -1.12
RTTN-223ENST00000640931 CDH8P55286 799 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 SNRPFP62306 86 aaKnown RBP8.03□□□□□ -1.12
RTTN-223ENST00000640931 TFAMQ00059 246 aaKnown RBP8.03□□□□□ -1.12
RTTN-223ENST00000640931 CENPCQ03188 943 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 MBTD1Q05BQ5 628 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 GRM1Q13255 1194 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 ADGRE1Q14246 886 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 SLC29A2Q14542 456 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 C1orf146Q5VVC0 180 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 IER5Q5VY09 327 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 ANKRD26P1Q6NSI1 321 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 TTC27Q6P3X3 843 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 XKR5Q6UX68 686 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 PRR23BQ6ZRT6 265 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 HDDC2Q7Z4H3 204 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 BBS7Q8IWZ6 715 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.03□□□□□ -1.12
RTTN-223ENST00000640931 VANGL1Q8TAA9 524 aaPredicted RBP8.03□□□□□ -1.12
RTTN-223ENST00000640931 HM13Q8TCT9 377 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 FIG4Q92562 907 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 PIK3R3Q92569 461 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 FOXJ1Q92949 421 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 SPACA7Q96KW9 195 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 ZNF560Q96MR9 790 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 CGRRF1Q99675 332 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 DCUN1D5Q9BTE7 237 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 SETD4Q9NVD3 440 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 PARVAQ9NVD7 372 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 AMACRQ9UHK6 382 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 DTX4Q9Y2E6 619 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 CORINQ9Y5Q5 1042 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 ALG6Q9Y672 507 aa8.03□□□□□ -1.12
RTTN-223ENST00000640931 A0A1B0GWJ7 208 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 GOLGA8SH3BPF8 625 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 AXIN1O15169 862 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 CLN5O75503 358 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 CRTAMO95727 393 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 NFICP08651 508 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 HOXC6P09630 235 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 BRAFP15056 766 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 RBL1P28749 1068 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 CTGFP29279 349 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 L1CAMP32004 1257 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 SOX11P35716 441 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 TRIM32Q13049 653 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 TRIP10Q15642 601 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 OASLQ15646 514 aaKnown RBP8.02□□□□□ -1.12
RTTN-223ENST00000640931 MARCH8Q5T0T0 291 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 PPP1R26Q5T8A7 1209 aaPredicted RBP8.02□□□□□ -1.12
RTTN-223ENST00000640931 IYDQ6PHW0 289 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 SYCE2Q6PIF2 218 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 FKBP9P1Q75LS8 142 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 PLPPR4Q7Z2D5 763 aa8.02□□□□□ -1.12
RTTN-223ENST00000640931 TMPRSS9Q7Z410 1059 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms