RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 VMP1Q96GC9 406 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 REXO4Q9GZR2 422 aaKnown RBP5.73□□□□□ -1.49
RTTN-218ENST00000640408 HAPLN2Q9GZV7 340 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 IRF2BPLQ9H1B7 796 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 RAD54BQ9Y620 910 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 A0A087X0T9 212 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 A0A1W2PQ72 361 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 SPTLC1O15269 473 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 APODP05090 189 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 IDO1P14902 403 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 ITGB8P26012 769 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 CCR3P51677 355 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 CDH6P55285 790 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 EIF4HQ15056 248 aaKnown RBP5.73□□□□□ -1.49
RTTN-218ENST00000640408 KIF19Q2TAC6 998 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 C6orf183Q5T699 404 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 GJB7Q6PEY0 223 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 POLNQ7Z5Q5 900 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 OR8H2Q8N162 312 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 MAFAQ8NHW3 353 aaPredicted RBP5.73□□□□□ -1.49
RTTN-218ENST00000640408 MS4A14Q96JA4 679 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 MYRFLQ96LU7 910 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 COG4Q9H9E3 785 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 GDF3Q9NR23 364 aa5.73□□□□□ -1.49
RTTN-218ENST00000640408 RBMX2Q9Y388 322 aaKnown RBP5.73□□□□□ -1.49
RTTN-218ENST00000640408 SNX2O60749 519 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 NOS1APO75052 506 aaPredicted RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 EPN2O95208 641 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 DRD4P21917 467 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 CES1P23141 567 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 RRM1P23921 792 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 LMO2P25791 158 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 PMLP29590 882 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 PBX1P40424 430 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 KCNJ2P63252 427 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 OCRLQ01968 901 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 POLD3Q15054 466 aaPredicted RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 ATP13A5Q4VNC0 1218 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 PTCRAQ6ISU1 281 aaPredicted RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 NIPAL1Q6NVV3 410 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 ATG14Q6ZNE5 492 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 RFX6Q8HWS3 928 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 RNASE11Q8TAA1 199 aaKnown RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 SLC35F5Q8WV83 523 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 AUTS2Q8WXX7 1259 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 NTAN1Q96AB6 310 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 PHF21AQ96BD5 680 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 MCEEQ96PE7 176 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 SP110Q9HB58 689 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 CSNK1G1Q9HCP0 422 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 H3BNX3 289 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 SYNCRIPO60506 623 aaKnown RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 ALDH1A2O94788 518 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 DDX5P17844 614 aaKnown RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 HLA-DPA1P20036 260 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 TAC1P20366 129 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 ZNF132P52740 706 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 ERVFC1P60507 584 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 FMO1Q01740 532 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 GPNMBQ14956 572 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 ITPRIPL2Q3MIP1 535 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 ZFP69Q49AA0 526 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 C1orf220Q5T0J3 134 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 C11orf63Q6NUN7 778 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 AAGABQ6PD74 315 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 LVRNQ6Q4G3 990 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 GRASPQ7Z6J2 395 aaPredicted RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 UBALD2Q8IYN6 164 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 MREGQ8N565 214 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 LMO3Q8TAP4 145 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 ITPKCQ96DU7 683 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 RC3H2Q9HBD1 1191 aaKnown RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 SUN2Q9UH99 717 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 SLC25A13Q9UJS0 675 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 H7C0C1 242 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 EEF2KO00418 725 aaKnown RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 KRT36O76013 467 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 CYP1A1P04798 512 aaPredicted RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 RHOCP08134 193 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 UQCRBP14927 111 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 ANPEPP15144 967 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 ATP5OP48047 213 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 RAB25P57735 213 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 NCALDP61601 193 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 ADAM15Q13444 863 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 ZNF235Q14590 738 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 MAPK11Q15759 364 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 MSANTD2Q6P1R3 559 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 PRR23CQ6ZRP0 262 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 IKBIPQ70UQ0 350 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 ZNF571Q7Z3V5 609 aaPredicted RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 IRF2BP2Q7Z5L9 587 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 MTDHQ86UE4 582 aaKnown RBP5.72□□□□□ -1.49
RTTN-218ENST00000640408 OR10T2Q8NGX3 314 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 SLC30A5Q8TAD4 765 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 RIN3Q8TB24 985 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 FAM172AQ8WUF8 416 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 KBTBD7Q8WVZ9 684 aa5.72□□□□□ -1.49
RTTN-218ENST00000640408 CITED4Q96RK1 184 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms